RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TMEM126AQ9H061 195 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 WFDC10AQ9H1F0 79 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 JPT1Q9UK76 154 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 MYH10P35580 1976 aa0.42□□□□□ -2.34
ECHDC1-213ENST00000474240 NCAPD3P42695 1498 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 CECR2Q9BXF3 1484 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 TRAV23DV6A0A075B6W5 121 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 A0A096LPI6 279 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 NDUFC2O95298 119 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 SRIP30626 198 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 LSM6P62312 80 aaKnown RBP0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 TMED2Q15363 201 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 TAF1AQ15573 450 aaPredicted RBP0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 SCGB2B2Q4G0G5 96 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 GOLT1AQ6ZVE7 132 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 CROCCP2Q86T23 111 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 Q8IYB0 196 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 MNS1Q8NEH6 495 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 OR4K15Q8NH41 348 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 MAP1LC3BQ9GZQ8 125 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 PLAC8Q9NZF1 115 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 ARL5AQ9Y689 179 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 SCN10AQ9Y5Y9 1956 aa0.41□□□□□ -2.34
ECHDC1-213ENST00000474240 CCDC144AA2RUR9 1427 aa0.4□□□□□ -2.34
ECHDC1-213ENST00000474240 ZFC3H1O60293 1989 aaKnown RBP0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 KIAA1549Q9HCM3 1950 aa0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 IFNA14P01570 189 aa0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 APOA2P02652 100 aa0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 ATP5G3P48201 142 aa0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 SERPINB9P50453 376 aa0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 DYNLT3P51808 116 aa0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 SPINK7P58062 85 aa0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 REEP5Q00765 189 aa0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 GRINAQ7Z429 371 aa0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 S100A7AQ86SG5 101 aa0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 LRRC18Q8N456 261 aa0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 STAG3L4Q8TBR4 150 aa0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 PARD6GQ9BYG4 376 aaPredicted RBP0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 BOKQ9UMX3 212 aaPredicted RBP0.4□□□□□ -2.35
ECHDC1-213ENST00000474240 MYH7BA7E2Y1 1941 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 ALPK3Q96L96 1907 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 TRAV27A0A087WT01 109 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 TRBV30A0A0K0K1B3 111 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 G3V2T6 193 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 TMEM256-PLSCR3K7ERE1 68 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 M0R378 163 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 LYRM1O43325 122 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 SPINT3P49223 89 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 ZNF137PP52743 207 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 ROMO1P60602 79 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 MRPS25P82663 173 aaKnown RBP0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 CIRBPQ14011 172 aaKnown RBP0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 ARPINQ7Z6K5 226 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 PPTC7Q8NI37 304 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 POP5Q969H6 163 aaKnown RBP0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 ZHX1-C8orf76Q96EF9 292 aa0.39□□□□□ -2.35
ECHDC1-213ENST00000474240 MYLKQ15746 1914 aa0.38□□□□□ -2.35
ECHDC1-213ENST00000474240 MED12Q93074 2177 aa0.38□□□□□ -2.35
ECHDC1-213ENST00000474240 NUPR2A6NF83 97 aa0.38□□□□□ -2.35
ECHDC1-213ENST00000474240 GPR31O00270 319 aa0.38□□□□□ -2.35
ECHDC1-213ENST00000474240 NFYBP25208 207 aa0.38□□□□□ -2.35
ECHDC1-213ENST00000474240 KLRD1Q13241 179 aa0.38□□□□□ -2.35
ECHDC1-213ENST00000474240 KRTAP21-1Q3LI58 79 aa0.38□□□□□ -2.35
ECHDC1-213ENST00000474240 CHCHD1Q96BP2 118 aaKnown RBP0.38□□□□□ -2.35
ECHDC1-213ENST00000474240 C9orf16Q9BUW7 83 aa0.38□□□□□ -2.35
ECHDC1-213ENST00000474240 GGACTQ9BVM4 153 aa0.38□□□□□ -2.35
ECHDC1-213ENST00000474240 UCK1Q9HA47 277 aa0.38□□□□□ -2.35
ECHDC1-213ENST00000474240 SIP14410 1827 aa0.38□□□□□ -2.35
ECHDC1-213ENST00000474240 CASP8AP2Q9UKL3 1982 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 A0A087WSZ3 146 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 DUXBA0A1W2PPF3 345 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 FOXA3P55318 350 aaPredicted RBP0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 HSPE1P61604 102 aaKnown RBP0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 C6orf52Q5T4I8 152 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 Q6ZQY7 126 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 LINC00299Q6ZSB3 139 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 ATOH7Q8N100 152 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 CEP19Q96LK0 163 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 HYLS1Q96M11 299 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 OR2J1Q9GZK6 312 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 POPDC3Q9HBV1 291 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 UHRF1BP1Q6BDS2 1440 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 MIA2Q96PC5 1412 aa0.37□□□□□ -2.35
ECHDC1-213ENST00000474240 hDV103S1A0JD37 113 aa0.36□□□□□ -2.35
ECHDC1-213ENST00000474240 NCALDP61601 193 aa0.36□□□□□ -2.35
ECHDC1-213ENST00000474240 NEK7Q8TDX7 302 aa0.36□□□□□ -2.35
ECHDC1-213ENST00000474240 PBDC1Q9BVG4 233 aa0.36□□□□□ -2.35
ECHDC1-213ENST00000474240 CACYBPQ9HB71 228 aaKnown RBP0.36□□□□□ -2.35
ECHDC1-213ENST00000474240 PYCARDQ9ULZ3 195 aa0.36□□□□□ -2.35
ECHDC1-213ENST00000474240 CAMSAP2Q08AD1 1489 aa0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 PHRF1Q9P1Y6 1649 aaKnown RBP0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 UBR2Q8IWV8 1755 aa0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 C5orf67F2Z3F1 127 aa0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 ATP5HO75947 161 aa0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 ATG12O94817 140 aa0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 CST2P09228 141 aa0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 QRFPP83859 136 aa0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 C1orf134Q5TEV5 83 aa0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 Q8TAT8 98 aa0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 AP1S3Q96PC3 154 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms