RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 RPLP1P05386 114 aaKnown RBP9.89□□□□□ -0.83
VPS13D-205ENST00000473099 LGALS1P09382 135 aaKnown RBP9.89□□□□□ -0.83
VPS13D-205ENST00000473099 OR10J4P0C629 311 aa9.89□□□□□ -0.83
VPS13D-205ENST00000473099 NBEAP1P0C6P0 100 aa9.89□□□□□ -0.83
VPS13D-205ENST00000473099 KIAA0141Q14154 515 aaPredicted RBP9.89□□□□□ -0.83
VPS13D-205ENST00000473099 C1orf194Q5T5A4 169 aa9.89□□□□□ -0.83
VPS13D-205ENST00000473099 Q71RC1 249 aaPredicted RBP9.89□□□□□ -0.83
VPS13D-205ENST00000473099 CYB561D1Q8N8Q1 229 aa9.89□□□□□ -0.83
VPS13D-205ENST00000473099 CRLF1O75462 422 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 SNAPINO95295 136 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 PYYP10082 97 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 ADCYAP1P18509 176 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 NPPCP23582 126 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 CRYBB3P26998 211 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 CDX1P47902 265 aaPredicted RBP9.88□□□□□ -0.83
VPS13D-205ENST00000473099 MEOX2P50222 304 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 PDE6HQ13956 83 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 FAM106AQ4KMX7 169 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 GPHB5Q86YW7 130 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 CCDC28AQ8IWP9 274 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 LYPD1Q8N2G4 141 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 RPUSD4Q96CM3 377 aaKnown RBP9.88□□□□□ -0.83
VPS13D-205ENST00000473099 NIPSNAP3BQ9BS92 247 aa9.88□□□□□ -0.83
VPS13D-205ENST00000473099 YTHDF2Q9Y5A9 579 aaKnown RBP9.88□□□□□ -0.83
VPS13D-205ENST00000473099 A0A1W2PS18 150 aa9.87□□□□□ -0.83
VPS13D-205ENST00000473099 BMI1P35226 326 aa9.87□□□□□ -0.83
VPS13D-205ENST00000473099 ATP5G3P48201 142 aa9.87□□□□□ -0.83
VPS13D-205ENST00000473099 FAM90A2PQ658T7 463 aa9.87□□□□□ -0.83
VPS13D-205ENST00000473099 C10orf99Q6UWK7 81 aa9.87□□□□□ -0.83
VPS13D-205ENST00000473099 LCNL1Q6ZST4 164 aa9.87□□□□□ -0.83
VPS13D-205ENST00000473099 OR8I2Q8N0Y5 310 aa9.87□□□□□ -0.83
VPS13D-205ENST00000473099 C11orf52Q96A22 123 aa9.87□□□□□ -0.83
VPS13D-205ENST00000473099 GRAMD2BQ96HH9 432 aa9.87□□□□□ -0.83
VPS13D-205ENST00000473099 ZNF414Q96IQ9 312 aa9.87□□□□□ -0.83
VPS13D-205ENST00000473099 IGHV3-35A0A0C4DH35 117 aa9.86□□□□□ -0.83
VPS13D-205ENST00000473099 K7EMT4 169 aa9.86□□□□□ -0.83
VPS13D-205ENST00000473099 BUB3O43684 328 aa9.86□□□□□ -0.83
VPS13D-205ENST00000473099 TRBV12-3P01733 135 aa9.86□□□□□ -0.83
VPS13D-205ENST00000473099 GALR1P47211 349 aa9.86□□□□□ -0.83
VPS13D-205ENST00000473099 CEBPGP53567 150 aa9.86□□□□□ -0.83
VPS13D-205ENST00000473099 PNRC1Q12796 327 aaPredicted RBP9.86□□□□□ -0.83
VPS13D-205ENST00000473099 RPEL1Q2QD12 228 aa9.86□□□□□ -0.83
VPS13D-205ENST00000473099 LEMD1Q68G75 181 aa9.86□□□□□ -0.83
VPS13D-205ENST00000473099 C4orf3Q8WVX3 66 aa9.86□□□□□ -0.83
VPS13D-205ENST00000473099 C20orf24Q9BUV8 137 aa9.86□□□□□ -0.83
VPS13D-205ENST00000473099 ELOVL1Q9BW60 279 aa9.86□□□□□ -0.83
VPS13D-205ENST00000473099 U3KQE9 123 aa9.86□□□□□ -0.83
VPS13D-205ENST00000473099 ANK3Q12955 4377 aaKnown RBP9.85□□□□□ -0.83
VPS13D-205ENST00000473099 CLPSL1A2RUU4 121 aa9.85□□□□□ -0.83
VPS13D-205ENST00000473099 ZNF727A8MUV8 499 aa9.85□□□□□ -0.83
VPS13D-205ENST00000473099 MRPS12O15235 138 aaKnown RBP9.85□□□□□ -0.83
VPS13D-205ENST00000473099 ZNF253O75346 499 aa9.85□□□□□ -0.83
VPS13D-205ENST00000473099 IGLC2P0DOY2 106 aa9.85□□□□□ -0.83
VPS13D-205ENST00000473099 ATF4P18848 351 aaPredicted RBP9.85□□□□□ -0.83
VPS13D-205ENST00000473099 SUMO1P63165 101 aaKnown RBP9.85□□□□□ -0.83
VPS13D-205ENST00000473099 ARL6IP6Q8N6S5 226 aa9.85□□□□□ -0.83
VPS13D-205ENST00000473099 LINC01006Q8NI28 216 aa9.85□□□□□ -0.83
VPS13D-205ENST00000473099 WIPF2Q8TF74 440 aaPredicted RBP9.85□□□□□ -0.83
VPS13D-205ENST00000473099 BLNKQ8WV28 456 aa9.85□□□□□ -0.83
VPS13D-205ENST00000473099 HIST1H2BAQ96A08 127 aa9.85□□□□□ -0.83
VPS13D-205ENST00000473099 SMIM7Q9BQ49 75 aa9.85□□□□□ -0.83
VPS13D-205ENST00000473099 PARLQ9H300 379 aa9.85□□□□□ -0.83
VPS13D-205ENST00000473099 DAZ1Q9NQZ3 744 aaKnown RBP9.85□□□□□ -0.83
VPS13D-205ENST00000473099 OTORQ9NRC9 128 aa9.85□□□□□ -0.83
VPS13D-205ENST00000473099 UFC1Q9Y3C8 167 aa9.85□□□□□ -0.83
VPS13D-205ENST00000473099 FN1P02751 2386 aaKnown RBP9.84□□□□□ -0.83
VPS13D-205ENST00000473099 TRBV19A0A075B6N1 114 aa9.84□□□□□ -0.83
VPS13D-205ENST00000473099 A0A087X0K7 114 aa9.84□□□□□ -0.83
VPS13D-205ENST00000473099 A0A1B0GUS0 222 aa9.84□□□□□ -0.83
VPS13D-205ENST00000473099 GGTLC3B5MD39 225 aa9.84□□□□□ -0.83
VPS13D-205ENST00000473099 LGALS9O00182 355 aa9.84□□□□□ -0.83
VPS13D-205ENST00000473099 PSG9Q00887 426 aa9.84□□□□□ -0.83
VPS13D-205ENST00000473099 REC114Q7Z4M0 266 aa9.84□□□□□ -0.83
VPS13D-205ENST00000473099 C5orf17Q8NAS9 161 aa9.84□□□□□ -0.83
VPS13D-205ENST00000473099 TVP23CQ96ET8 276 aa9.84□□□□□ -0.83
VPS13D-205ENST00000473099 AAMDCQ9H7C9 122 aa9.84□□□□□ -0.83
VPS13D-205ENST00000473099 ZNF586Q9NXT0 402 aa9.84□□□□□ -0.83
VPS13D-205ENST00000473099 NAT8Q9UHE5 227 aa9.84□□□□□ -0.83
VPS13D-205ENST00000473099 SCO2A0A1W2PP80 73 aa9.83□□□□□ -0.84
VPS13D-205ENST00000473099 A8MWP6 167 aa9.83□□□□□ -0.84
VPS13D-205ENST00000473099 B4DEV8 164 aa9.83□□□□□ -0.84
VPS13D-205ENST00000473099 H3BQ15 152 aa9.83□□□□□ -0.84
VPS13D-205ENST00000473099 S100A9P06702 114 aaKnown RBP9.83□□□□□ -0.84
VPS13D-205ENST00000473099 MYCNOSP40205 109 aa9.83□□□□□ -0.84
VPS13D-205ENST00000473099 RANP62826 216 aaKnown RBP9.83□□□□□ -0.84
VPS13D-205ENST00000473099 RHEBQ15382 184 aa9.83□□□□□ -0.84
VPS13D-205ENST00000473099 GUCA2BQ16661 112 aa9.83□□□□□ -0.84
VPS13D-205ENST00000473099 C16orf54Q6UWD8 224 aa9.83□□□□□ -0.84
VPS13D-205ENST00000473099 CLRN3Q8NCR9 226 aa9.83□□□□□ -0.84
VPS13D-205ENST00000473099 OR5B12Q96R08 314 aa9.83□□□□□ -0.84
VPS13D-205ENST00000473099 Q9H3A6 140 aa9.83□□□□□ -0.84
VPS13D-205ENST00000473099 CLEC5AQ9NY25 188 aa9.83□□□□□ -0.84
VPS13D-205ENST00000473099 IGHV3OR16-8A0A075B7F1 116 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 IGHV7-4-1A0A0J9YVY3 117 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 ZNF320A2RRD8 509 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 PGPA6NDG6 321 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 NDUFB4O95168 129 aa9.82□□□□□ -0.84
VPS13D-205ENST00000473099 SLC25A5P05141 298 aaKnown RBP9.82□□□□□ -0.84
VPS13D-205ENST00000473099 CNN1P51911 297 aaKnown RBP9.82□□□□□ -0.84
VPS13D-205ENST00000473099 TMEM241Q24JQ0 296 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms