RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 FNDC4Q9H6D8 234 aaPredicted RBP4.94□□□□□ -1.62
HDAC1-205ENST00000472928 TIMM9Q9Y5J7 89 aa4.94□□□□□ -1.62
HDAC1-205ENST00000472928 IGLV11-55A0A075B6I3 123 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 TRAV41A0A0B4J266 112 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 LINC01548A6NM66 108 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 G3V318 75 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 K7EIM0 57 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 IGHG2P01859 326 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 MBP02144 154 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 CRYGCP07315 174 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 LINC00614P0C842 121 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 OR10J1P30954 320 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 CAMLGP49069 296 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 ZNF616Q08AN1 781 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 RAB31Q13636 194 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 GAMTQ14353 236 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 RHEBQ15382 184 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 MIC13Q5XKP0 118 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 PVRIGQ6DKI7 326 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 ACSM6Q6P461 480 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 Q6ZRG5 221 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 TMEM144Q7Z5S9 345 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 MRPL52Q86TS9 123 aaKnown RBP4.93□□□□□ -1.62
HDAC1-205ENST00000472928 TTC9CQ8N5M4 171 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 OR5T1Q8NG75 326 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 OR1L6Q8NGR2 347 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 CACNG8Q8WXS5 425 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 SLC25A22Q9H936 323 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 ZNF355PQ9NSJ1 428 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 MRPL36Q9P0J6 103 aaKnown RBP4.93□□□□□ -1.62
HDAC1-205ENST00000472928 LINC00527Q9UJ94 153 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 LSM4Q9Y4Z0 139 aaKnown RBP4.93□□□□□ -1.62
HDAC1-205ENST00000472928 PXMP4Q9Y6I8 212 aa4.93□□□□□ -1.62
HDAC1-205ENST00000472928 SORL1Q92673 2214 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 IGKV1OR2-108A0A075B7D4 117 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 ZFP92A6NM28 416 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 IFITM10A6NMD0 228 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 UMAD1C9J7I0 102 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 I3L2K1 104 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 AGPAT2O15120 278 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 TGOLN2O43493 480 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 OR2J3O76001 311 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 SFTA3P0C7M3 94 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 FHITP49789 147 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 PTTG1IPP53801 180 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 BLCAPP62952 87 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 RHOGP84095 191 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 AKIRIN2Q53H80 203 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 TMEM41BQ5BJD5 291 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 TCTEX1D4Q5JR98 221 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 SAPCD1Q5SSQ6 148 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 CYP2G1PQ6ZSU1 146 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 THAP8Q8NA92 274 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 SYT8Q8NBV8 401 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 MUC7Q8TAX7 377 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 NPIPB3Q92617 1050 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 NDUFAF3Q9BU61 184 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 VSIRQ9H7M9 311 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 NPVFQ9HCQ7 196 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 RPS10P5Q9NQ39 176 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 S4R3C0 116 aa4.92□□□□□ -1.62
HDAC1-205ENST00000472928 PCLOQ9Y6V0 5065 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 IGKV1D-37A0A075B6S9 117 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 A0A1B0GV50 99 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 TCRBV4S1A1TA0A5B7 111 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 C7orf77A4D0Y5 90 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 CXorf65A6NEN9 183 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 SOX15O60248 233 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 YIF1AO95070 293 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 NDUFB8O95169 186 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 IGHV3-23P01764 117 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 IGF1P05019 195 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 TPPP2P59282 170 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 SERF2P84101 59 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 KIAA0141Q14154 515 aaPredicted RBP4.91□□□□□ -1.62
HDAC1-205ENST00000472928 C15orf32Q32M92 178 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 ACOT6Q3I5F7 207 aaPredicted RBP4.91□□□□□ -1.62
HDAC1-205ENST00000472928 Q56UQ5 140 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 GCSAMLQ5JQS6 135 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 DPPA3Q6W0C5 159 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 TMEM116Q8NCL8 245 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 OR4X1Q8NH49 305 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 YPEL4Q96NS1 127 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 MS4A10Q96PG2 267 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 PRSS22Q9GZN4 317 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 C21orf62Q9NYP8 219 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 THYN1Q9P016 225 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 ALMS1Q8TCU4 4167 aa4.91□□□□□ -1.62
HDAC1-205ENST00000472928 FRAS1Q86XX4 4008 aa4.9□□□□□ -1.62
HDAC1-205ENST00000472928 CTXND1A0A1B0GTU2 59 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 MAP1LC3B2A6NCE7 125 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 OR2T8A6NH00 312 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 FAM223BA6NKX1 122 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 A8MWP6 167 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 H3BUA1 57 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 GNG7O60262 68 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 GGCTO75223 188 aaKnown RBP4.9□□□□□ -1.63
HDAC1-205ENST00000472928 SCGB2A1O75556 95 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 TRGV3P03979 118 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 LINC00869P0C866 280 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms