RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 BOD1L2Q8IYS8 172 aa8.15□□□□□ -1.11
APTX-216ENST00000472896 MAPK1IP1LQ8NDC0 245 aa8.15□□□□□ -1.11
APTX-216ENST00000472896 OR4A5Q8NH83 315 aa8.15□□□□□ -1.11
APTX-216ENST00000472896 UBALD1Q8TB05 177 aa8.15□□□□□ -1.11
APTX-216ENST00000472896 CCL19Q99731 98 aa8.15□□□□□ -1.11
APTX-216ENST00000472896 USF3Q68DE3 2245 aa8.14□□□□□ -1.11
APTX-216ENST00000472896 SH2D7A6NKC9 451 aaPredicted RBP8.14□□□□□ -1.11
APTX-216ENST00000472896 ADH4P08319 380 aa8.14□□□□□ -1.11
APTX-216ENST00000472896 FABP6P51161 128 aa8.14□□□□□ -1.11
APTX-216ENST00000472896 B3GALT5-AS1P59052 145 aa8.14□□□□□ -1.11
APTX-216ENST00000472896 ABHD12Q8N2K0 398 aa8.14□□□□□ -1.11
APTX-216ENST00000472896 IGFBPL1Q8WX77 278 aa8.14□□□□□ -1.11
APTX-216ENST00000472896 MRAP2Q96G30 205 aa8.14□□□□□ -1.11
APTX-216ENST00000472896 GTSF1LQ9H1H1 148 aa8.14□□□□□ -1.11
APTX-216ENST00000472896 C7orf69Q9H7B7 122 aa8.14□□□□□ -1.11
APTX-216ENST00000472896 ZNF492Q9P255 531 aa8.14□□□□□ -1.11
APTX-216ENST00000472896 RABAC1Q9UI14 185 aa8.14□□□□□ -1.11
APTX-216ENST00000472896 AMMECR1Q9Y4X0 333 aaPredicted RBP8.14□□□□□ -1.11
APTX-216ENST00000472896 ANK3Q12955 4377 aaKnown RBP8.14□□□□□ -1.11
APTX-216ENST00000472896 TEX50A0A1B0GTY4 177 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 PEX7O00628 323 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 CXCL13O43927 109 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 ACTL6BO94805 426 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 SMIM13P0DJ93 91 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 CT45A6P0DMU7 189 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 CT45A5P0DMU8 189 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 CT45A7P0DMV0 189 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 LOXP28300 417 aaPredicted RBP8.13□□□□□ -1.11
APTX-216ENST00000472896 CSN1S1P47710 185 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 RAB9AP51151 201 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 RPL24P83731 157 aaKnown RBP8.13□□□□□ -1.11
APTX-216ENST00000472896 PLP2Q04941 152 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 FAM27E3Q08E93 113 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 SMAGPQ0VAQ4 97 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 CT45A1Q5HYN5 189 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 TMEM108Q6UXF1 575 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 GGNQ86UU5 652 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 CT45A3Q8NHU0 189 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 TMEM158Q8WZ71 300 aa8.13□□□□□ -1.11
APTX-216ENST00000472896 RPP21Q9H633 154 aaKnown RBP8.13□□□□□ -1.11
APTX-216ENST00000472896 TEX48A0A1B0GUV7 120 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 F8W1H4 67 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 FCGR3BO75015 233 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 MC5RP33032 325 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 SAMD5Q5TGI4 173 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 C22orf34Q6ZV56 151 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 MED12LQ86YW9 2145 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 SLC25A33Q9BSK2 321 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 FOXA2Q9Y261 457 aaPredicted RBP8.12□□□□□ -1.11
APTX-216ENST00000472896 RAI1Q7Z5J4 1906 aaPredicted RBP8.12□□□□□ -1.11
APTX-216ENST00000472896 ABCA1O95477 2261 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 ROS1P08922 2347 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 IGKV3D-15A0A087WSY6 115 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.12□□□□□ -1.11
APTX-216ENST00000472896 C15orf61A6NNL5 157 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 J3QW42 95 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 HSPE1P61604 102 aaKnown RBP8.12□□□□□ -1.11
APTX-216ENST00000472896 LGALS9BQ3B8N2 356 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 LGALS9CQ6DKI2 356 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 ADAMTSL5Q6ZMM2 481 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 S100A7AQ86SG5 101 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 BLNKQ8WV28 456 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 WFDC12Q8WWY7 111 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 ZNF747Q9BV97 191 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 THYN1Q9P016 225 aa8.12□□□□□ -1.11
APTX-216ENST00000472896 CHEK1O14757 476 aa8.11□□□□□ -1.11
APTX-216ENST00000472896 MRPL33O75394 65 aaKnown RBP8.11□□□□□ -1.11
APTX-216ENST00000472896 UBE2L3P68036 154 aaKnown RBP8.11□□□□□ -1.11
APTX-216ENST00000472896 GUSBP1Q15486 140 aa8.11□□□□□ -1.11
APTX-216ENST00000472896 RBPMS2Q6ZRY4 209 aaKnown RBP8.11□□□□□ -1.11
APTX-216ENST00000472896 YRDCQ86U90 279 aaKnown RBP8.11□□□□□ -1.11
APTX-216ENST00000472896 ZNF329Q86UD4 541 aa8.11□□□□□ -1.11
APTX-216ENST00000472896 OR10D3Q8NH80 312 aa8.11□□□□□ -1.11
APTX-216ENST00000472896 PRRG4Q9BZD6 226 aa8.11□□□□□ -1.11
APTX-216ENST00000472896 PRSS22Q9GZN4 317 aa8.11□□□□□ -1.11
APTX-216ENST00000472896 TMEM140Q9NV12 185 aa8.11□□□□□ -1.11
APTX-216ENST00000472896 TSSC4Q9Y5U2 329 aaPredicted RBP8.11□□□□□ -1.11
APTX-216ENST00000472896 RNF223E7ERA6 249 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 SPINT2O43291 252 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 CT45A10P0DMU9 189 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 KIR2DL2P43627 348 aaPredicted RBP8.1□□□□□ -1.11
APTX-216ENST00000472896 FOXA3P55318 350 aaPredicted RBP8.1□□□□□ -1.11
APTX-216ENST00000472896 AESQ08117 197 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 Q6ZR03 302 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 GCSAMQ8N6F7 178 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 GATD1Q8NB37 220 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 ZC2HC1AQ96GY0 325 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 ZNF714Q96N38 554 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 S1PR3Q99500 378 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 VGLL1Q99990 258 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 YAE1D1Q9NRH1 226 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 CR1P17927 2039 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 A0A1B0GW15 77 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 VWC2LB2RUY7 222 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 WIPF1O43516 503 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 IGHV3-7P01780 117 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 CCL2P13500 99 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 CRYBA4P53673 196 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 SRYQ05066 204 aa8.1□□□□□ -1.11
APTX-216ENST00000472896 MEF2CQ06413 473 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 572.7 ms