RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 PBOV1Q9GZY1 135 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 POPDC3Q9HBV1 291 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 SSR3Q9UNL2 185 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 LAMB4A4D0S4 1761 aa1□□□□□ -2.25
PRPF40A-208ENST00000472760 OBSL1O75147 1896 aa0.99□□□□□ -2.25
PRPF40A-208ENST00000472760 PEAK1Q9H792 1746 aa0.99□□□□□ -2.25
PRPF40A-208ENST00000472760 F8W1H4 67 aa0.99□□□□□ -2.25
PRPF40A-208ENST00000472760 CRHP06850 196 aa0.99□□□□□ -2.25
PRPF40A-208ENST00000472760 C1orf134Q5TEV5 83 aa0.99□□□□□ -2.25
PRPF40A-208ENST00000472760 Q8N6K4 173 aa0.99□□□□□ -2.25
PRPF40A-208ENST00000472760 OR4K15Q8NH41 348 aa0.99□□□□□ -2.25
PRPF40A-208ENST00000472760 RAB37Q96AX2 223 aa0.99□□□□□ -2.25
PRPF40A-208ENST00000472760 LYRM2Q9NU23 88 aaPredicted RBP0.99□□□□□ -2.25
PRPF40A-208ENST00000472760 STOML2Q9UJZ1 356 aa0.99□□□□□ -2.25
PRPF40A-208ENST00000472760 TNFSF18Q9UNG2 199 aa0.99□□□□□ -2.25
PRPF40A-208ENST00000472760 E9PCH4 1651 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 IGLV3-32A0A0A0MS00 114 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 RIIAD1A6NNX1 92 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 H3BRM9 83 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 APOA2P02652 100 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 CXCL8P10145 99 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 RAB5CP51148 216 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 RPL19P84098 196 aaKnown RBP0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 HAGHLQ6PII5 290 aaPredicted RBP0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 PPTC7Q8NI37 304 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 ZHX1-C8orf76Q96EF9 292 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 PAIP2Q9BPZ3 127 aaKnown RBP0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 TMEM70Q9BUB7 260 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 PBDC1Q9BVG4 233 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 GGACTQ9BVM4 153 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 PSTPIP2Q9H939 334 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 OR52A1Q9UKL2 312 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 CEP164Q9UPV0 1460 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 DOCK3Q8IZD9 2030 aa0.98□□□□□ -2.25
PRPF40A-208ENST00000472760 IFNA14P01570 189 aa0.97□□□□□ -2.25
PRPF40A-208ENST00000472760 EFNA4P52798 201 aa0.97□□□□□ -2.25
PRPF40A-208ENST00000472760 SNCBQ16143 134 aa0.97□□□□□ -2.25
PRPF40A-208ENST00000472760 PATE2Q6UY27 113 aa0.97□□□□□ -2.25
PRPF40A-208ENST00000472760 OR13C6PQ8NH95 151 aa0.97□□□□□ -2.25
PRPF40A-208ENST00000472760 Q8TAT8 98 aa0.97□□□□□ -2.25
PRPF40A-208ENST00000472760 CHCHD1Q96BP2 118 aaKnown RBP0.97□□□□□ -2.25
PRPF40A-208ENST00000472760 SH3BGRL3Q9H299 93 aa0.97□□□□□ -2.25
PRPF40A-208ENST00000472760 TMEM138Q9NPI0 162 aa0.97□□□□□ -2.25
PRPF40A-208ENST00000472760 COL1A1P02452 1464 aaPredicted RBP0.97□□□□□ -2.25
PRPF40A-208ENST00000472760 UHRF1BP1Q6BDS2 1440 aa0.97□□□□□ -2.25
PRPF40A-208ENST00000472760 MCM3APO60318 1980 aa0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 OR2T8A6NH00 312 aa0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 IFNA1P01562 189 aa0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 TRGC2P03986 189 aa0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 CXCL1P09341 107 aa0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 COX7CP15954 63 aa0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 OGNP20774 298 aaKnown RBP0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 INSL3P51460 131 aa0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 TMBIM6P55061 237 aa0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 ARPP19P56211 112 aa0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 LYSMD1Q96S90 227 aa0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 GINS3Q9BRX5 216 aa0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 SS18L2Q9UHA2 77 aa0.96□□□□□ -2.26
PRPF40A-208ENST00000472760 CECR2Q9BXF3 1484 aa0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 SCN3AQ9NY46 2000 aa0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 A0A087WSZ3 146 aa0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 A0A1W2PPM0 123 aa0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 IGLV1-51P01701 117 aa0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 IFNA4P05014 189 aa0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 PRB4P10163 310 aaPredicted RBP0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 KLRD1Q13241 179 aa0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 GRINAQ7Z429 371 aa0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 TMED4Q7Z7H5 227 aa0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 OR5AS1Q8N127 324 aa0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 MAP1LC3BQ9GZQ8 125 aa0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 CACYBPQ9HB71 228 aaKnown RBP0.95□□□□□ -2.26
PRPF40A-208ENST00000472760 TNRC6AQ8NDV7 1962 aaKnown RBP0.94□□□□□ -2.26
PRPF40A-208ENST00000472760 PPP1R2P41236 205 aa0.94□□□□□ -2.26
PRPF40A-208ENST00000472760 KRTAP26-1Q6PEX3 210 aa0.94□□□□□ -2.26
PRPF40A-208ENST00000472760 ARPINQ7Z6K5 226 aa0.94□□□□□ -2.26
PRPF40A-208ENST00000472760 SBSPONQ8IVN8 264 aa0.94□□□□□ -2.26
PRPF40A-208ENST00000472760 AP3S1Q92572 193 aa0.94□□□□□ -2.26
PRPF40A-208ENST00000472760 MALSU1Q96EH3 234 aa0.94□□□□□ -2.26
PRPF40A-208ENST00000472760 HYLS1Q96M11 299 aa0.94□□□□□ -2.26
PRPF40A-208ENST00000472760 GPX7Q96SL4 187 aaPredicted RBP0.94□□□□□ -2.26
PRPF40A-208ENST00000472760 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
PRPF40A-208ENST00000472760 MYH7BA7E2Y1 1941 aa0.93□□□□□ -2.26
PRPF40A-208ENST00000472760 TRAV27A0A087WT01 109 aa0.93□□□□□ -2.26
PRPF40A-208ENST00000472760 POU6F1Q14863 301 aa0.93□□□□□ -2.26
PRPF40A-208ENST00000472760 LRRC18Q8N456 261 aa0.93□□□□□ -2.26
PRPF40A-208ENST00000472760 CCDC94Q9BW85 323 aaPredicted RBP0.93□□□□□ -2.26
PRPF40A-208ENST00000472760 SCN8AQ9UQD0 1980 aa0.93□□□□□ -2.26
PRPF40A-208ENST00000472760 LAMA4Q16363 1823 aa0.93□□□□□ -2.26
PRPF40A-208ENST00000472760 NCAPD3P42695 1498 aa0.92□□□□□ -2.26
PRPF40A-208ENST00000472760 ODAMA1E959 279 aa0.92□□□□□ -2.26
PRPF40A-208ENST00000472760 K7ERJ3 54 aa0.92□□□□□ -2.26
PRPF40A-208ENST00000472760 RER1O15258 196 aa0.92□□□□□ -2.26
PRPF40A-208ENST00000472760 VBP1P61758 197 aa0.92□□□□□ -2.26
PRPF40A-208ENST00000472760 CDC26Q8NHZ8 85 aa0.92□□□□□ -2.26
PRPF40A-208ENST00000472760 PSMF1Q92530 271 aa0.92□□□□□ -2.26
PRPF40A-208ENST00000472760 EIF3AQ14152 1382 aaKnown RBP0.92□□□□□ -2.26
PRPF40A-208ENST00000472760 NOTCH1P46531 2555 aa0.91□□□□□ -2.26
PRPF40A-208ENST00000472760 TRAV5A0A0B4J249 113 aa0.91□□□□□ -2.26
PRPF40A-208ENST00000472760 hDV103S1A0JD37 113 aa0.91□□□□□ -2.26
PRPF40A-208ENST00000472760 HIST1H2BKO60814 126 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms