RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 TMEM144Q7Z5S9 345 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 THAP8Q8NA92 274 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 OR51G1Q8NGK1 321 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 MARC2Q969Z3 335 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 TRGV9Q99603 122 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 PBDC1Q9BVG4 233 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 RHPN1-AS1Q9BWJ2 59 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 TECRQ9NZ01 308 aaKnown RBP5.03□□□□□ -1.6
SCN9A-206ENST00000472119 MBD2Q9UBB5 411 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 SMPXQ9UHP9 88 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 MEGF8Q7Z7M0 2845 aa5.03□□□□□ -1.6
SCN9A-206ENST00000472119 K7EIL1 84 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 CHEK1O14757 476 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 GP9P14770 177 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 CRYBB3P26998 211 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 S100A11P31949 105 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 P2RY1P47900 373 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 LYZP61626 148 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 EWSR1Q01844 656 aaKnown RBP eCLIP5.02□□□□□ -1.61
SCN9A-206ENST00000472119 USF2Q15853 346 aaPredicted RBP5.02□□□□□ -1.61
SCN9A-206ENST00000472119 GUCA2BQ16661 112 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 LCN12Q6JVE5 192 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 RBPMS2Q6ZRY4 209 aaKnown RBP5.02□□□□□ -1.61
SCN9A-206ENST00000472119 STX12Q86Y82 276 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 TMEM61Q8N0U2 210 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 THAP6Q8TBB0 222 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 CHAC2Q8WUX2 184 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 RNF125Q96EQ8 232 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 METTL26Q96S19 204 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 RNF2Q99496 336 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 GINS3Q9BRX5 216 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 GGACTQ9BVM4 153 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 SLC25A31Q9H0C2 315 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 NPVFQ9HCQ7 196 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 UQCC1Q9NVA1 299 aa5.02□□□□□ -1.61
SCN9A-206ENST00000472119 ZMAT5Q9UDW3 170 aaKnown RBP5.02□□□□□ -1.61
SCN9A-206ENST00000472119 SORL1Q92673 2214 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 DNAH3Q8TD57 4116 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 IGKV3-7A0A075B6H7 116 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 FNDC10F2Z333 226 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 SMLR1H3BR10 107 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 AGPAT2O15120 278 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 DFFBO76075 338 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 FABP1P07148 127 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 GIPP09681 153 aaPredicted RBP5.01□□□□□ -1.61
SCN9A-206ENST00000472119 PET100P0DJ07 73 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 ORM2P19652 201 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 RPL12P30050 165 aaKnown RBP5.01□□□□□ -1.61
SCN9A-206ENST00000472119 HBG1P69891 147 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 HBG2P69892 147 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 CLINT1Q14677 625 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 DEFB121Q5J5C9 76 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 LAMTOR1Q6IAA8 161 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 CYP2G1PQ6ZSU1 146 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 TCF24Q7RTU0 167 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 GBGT1Q8N5D6 347 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 OR5C1Q8NGR4 320 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 OR2T35Q8NGX2 323 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 MGST2Q99735 147 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 TMEM147Q9BVK8 224 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 SMIM3Q9BZL3 60 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 VSIRQ9H7M9 311 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 DOK5Q9P104 306 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 RABAC1Q9UI14 185 aa5.01□□□□□ -1.61
SCN9A-206ENST00000472119 LSM4Q9Y4Z0 139 aaKnown RBP5.01□□□□□ -1.61
SCN9A-206ENST00000472119 UBE2L5PA0A1B0GUS4 154 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 A0A1W2PS18 150 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 CD7P09564 240 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 LINC00869P0C866 280 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 LYL1P12980 280 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 FGF7P21781 194 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 TFPI2P48307 235 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 CAMLGP49069 296 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 EIF2B2P49770 351 aaKnown RBP5□□□□□ -1.61
SCN9A-206ENST00000472119 CD81P60033 236 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 BAXQ07812 192 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 ATP6V1FQ16864 119 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 VWC2Q2TAL6 325 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 LCE1FQ5T754 118 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 BPIFCQ8NFQ6 507 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 OR1B1Q8NGR6 318 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 OR2K2Q8NGT1 345 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 MRAPQ8TCY5 172 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 PPP1R14BQ96C90 147 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 NARS2Q96I59 477 aaKnown RBP5□□□□□ -1.61
SCN9A-206ENST00000472119 WDR83OSQ9Y284 106 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 HSPB11Q9Y547 144 aa5□□□□□ -1.61
SCN9A-206ENST00000472119 hCG_2014768A0A024R1R8 64 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 FXYD6-FXYD2A0A087WZ82 144 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 TRAV25A0A0B4J276 109 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 G3V3Q6 166 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 TSPAN4O14817 238 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 BUB3O43684 328 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 HYPMO75409 117 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 CFDP00746 253 aaPredicted RBP4.99□□□□□ -1.61
SCN9A-206ENST00000472119 OR5G3P0C626 314 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 BMI1P35226 326 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 SELENOTP62341 195 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 FGL1Q08830 312 aa4.99□□□□□ -1.61
SCN9A-206ENST00000472119 RAB31Q13636 194 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms