RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 TMEM263Q8WUH6 116 aaKnown RBP12.99□□□□□ -0.33
SORT1-203ENST00000471996 RBPMSQ93062 196 aaKnown RBP12.99□□□□□ -0.33
SORT1-203ENST00000471996 COMMD3Q9UBI1 195 aa12.99□□□□□ -0.33
SORT1-203ENST00000471996 TNFRSF18Q9Y5U5 241 aa12.99□□□□□ -0.33
SORT1-203ENST00000471996 TRAV8-2A0A0B4J237 113 aa12.98□□□□□ -0.33
SORT1-203ENST00000471996 OR5AC1P0C628 307 aa12.98□□□□□ -0.33
SORT1-203ENST00000471996 GPX4P36969 197 aaPredicted RBP12.98□□□□□ -0.33
SORT1-203ENST00000471996 MEF2DQ14814 521 aa12.98□□□□□ -0.33
SORT1-203ENST00000471996 RNASE10Q5GAN6 216 aaKnown RBP12.98□□□□□ -0.33
SORT1-203ENST00000471996 MZT2AQ6P582 158 aa12.98□□□□□ -0.33
SORT1-203ENST00000471996 SELENOHQ8IZQ5 122 aaKnown RBP12.98□□□□□ -0.33
SORT1-203ENST00000471996 RNF182Q8N6D2 247 aa12.98□□□□□ -0.33
SORT1-203ENST00000471996 AP3S1Q92572 193 aa12.98□□□□□ -0.33
SORT1-203ENST00000471996 SLC35E1Q96K37 410 aa12.98□□□□□ -0.33
SORT1-203ENST00000471996 SLC25A22Q9H936 323 aa12.98□□□□□ -0.33
SORT1-203ENST00000471996 CACFD1Q9UGQ2 172 aa12.98□□□□□ -0.33
SORT1-203ENST00000471996 ZNF98A6NK75 572 aa12.97□□□□□ -0.33
SORT1-203ENST00000471996 GABARAPH6UMI1 98 aa12.97□□□□□ -0.33
SORT1-203ENST00000471996 GABARAPO95166 117 aa12.97□□□□□ -0.33
SORT1-203ENST00000471996 NFE4Q86UQ8 179 aa12.97□□□□□ -0.33
SORT1-203ENST00000471996 LGI3Q8N145 548 aa12.97□□□□□ -0.33
SORT1-203ENST00000471996 OR13C8Q8NGS7 320 aa12.97□□□□□ -0.33
SORT1-203ENST00000471996 A0A096LPF7 62 aa12.96□□□□□ -0.33
SORT1-203ENST00000471996 TEX13DA0A0J9YY54 714 aaPredicted RBP12.96□□□□□ -0.33
SORT1-203ENST00000471996 RHOBP62745 196 aa12.96□□□□□ -0.33
SORT1-203ENST00000471996 OR4D5Q8NGN0 318 aa12.96□□□□□ -0.33
SORT1-203ENST00000471996 OR1B1Q8NGR6 318 aa12.96□□□□□ -0.33
SORT1-203ENST00000471996 TRGV9Q99603 122 aa12.96□□□□□ -0.33
SORT1-203ENST00000471996 MRPS26Q9BYN8 205 aaKnown RBP12.96□□□□□ -0.33
SORT1-203ENST00000471996 SLC45A2Q9UMX9 530 aa12.96□□□□□ -0.33
SORT1-203ENST00000471996 GAGE12BA1L429 117 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 GAGE7O76087 117 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 CD3DP04234 171 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 GAGE12FP0CL80 117 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 GAGE12GP0CL81 117 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 GAGE12IP0CL82 117 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 SMIM18P0DKX4 95 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 HIST1H1AQ02539 215 aaPredicted RBP12.95□□□□□ -0.34
SORT1-203ENST00000471996 CTF1Q16619 201 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 SYT8Q8NBV8 401 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 ZNF738Q8NE65 137 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 TERB2Q8NHR7 220 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 GPR82Q96P67 336 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 PPP1R14DQ9NXH3 145 aa12.95□□□□□ -0.34
SORT1-203ENST00000471996 H7BYZ3 331 aa12.94□□□□□ -0.34
SORT1-203ENST00000471996 CFDP00746 253 aaPredicted RBP12.94□□□□□ -0.34
SORT1-203ENST00000471996 ATP5IP56385 69 aaPredicted RBP12.94□□□□□ -0.34
SORT1-203ENST00000471996 TMEM268Q5VZI3 342 aa12.94□□□□□ -0.34
SORT1-203ENST00000471996 OR8A1Q8NGG7 326 aa12.94□□□□□ -0.34
SORT1-203ENST00000471996 DTD1Q8TEA8 209 aa12.94□□□□□ -0.34
SORT1-203ENST00000471996 C15orf40Q8WUR7 153 aa12.94□□□□□ -0.34
SORT1-203ENST00000471996 VSIG2Q96IQ7 327 aa12.94□□□□□ -0.34
SORT1-203ENST00000471996 TMEM70Q9BUB7 260 aa12.94□□□□□ -0.34
SORT1-203ENST00000471996 IGKV1OR2-108A0A075B7D4 117 aa12.93□□□□□ -0.34
SORT1-203ENST00000471996 NXPH4O95158 308 aa12.93□□□□□ -0.34
SORT1-203ENST00000471996 RLN2P04090 185 aa12.93□□□□□ -0.34
SORT1-203ENST00000471996 SULT1A3P0DMM9 295 aa12.93□□□□□ -0.34
SORT1-203ENST00000471996 SULT1A4P0DMN0 295 aa12.93□□□□□ -0.34
SORT1-203ENST00000471996 GGNBP1Q5YKI7 109 aa12.93□□□□□ -0.34
SORT1-203ENST00000471996 MARCH1Q8TCQ1 289 aa12.93□□□□□ -0.34
SORT1-203ENST00000471996 NAA60Q9H7X0 242 aa12.93□□□□□ -0.34
SORT1-203ENST00000471996 HSPB7Q9UBY9 170 aa12.93□□□□□ -0.34
SORT1-203ENST00000471996 HPGDSO60760 199 aa12.92□□□□□ -0.34
SORT1-203ENST00000471996 TBPP20226 339 aa12.92□□□□□ -0.34
SORT1-203ENST00000471996 CDKN1BP46527 198 aa12.92□□□□□ -0.34
SORT1-203ENST00000471996 FGL1Q08830 312 aa12.92□□□□□ -0.34
SORT1-203ENST00000471996 GPR107Q5VW38 600 aa12.92□□□□□ -0.34
SORT1-203ENST00000471996 OR4D10Q8NGI6 311 aa12.92□□□□□ -0.34
SORT1-203ENST00000471996 TMPRSS5Q9H3S3 457 aa12.92□□□□□ -0.34
SORT1-203ENST00000471996 RBKSQ9H477 322 aa12.92□□□□□ -0.34
SORT1-203ENST00000471996 FAM25AB3EWG3 89 aa12.91□□□□□ -0.34
SORT1-203ENST00000471996 FAM25CB3EWG5 89 aa12.91□□□□□ -0.34
SORT1-203ENST00000471996 FAM25GB3EWG6 89 aa12.91□□□□□ -0.34
SORT1-203ENST00000471996 SCGB2B2Q4G0G5 96 aa12.91□□□□□ -0.34
SORT1-203ENST00000471996 TMED4Q7Z7H5 227 aa12.91□□□□□ -0.34
SORT1-203ENST00000471996 CCDC28AQ8IWP9 274 aa12.91□□□□□ -0.34
SORT1-203ENST00000471996 THAP8Q8NA92 274 aa12.91□□□□□ -0.34
SORT1-203ENST00000471996 RTBDNQ9BSG5 229 aaPredicted RBP12.91□□□□□ -0.34
SORT1-203ENST00000471996 NAA50Q9GZZ1 169 aaKnown RBP12.91□□□□□ -0.34
SORT1-203ENST00000471996 TMEM56-RWDD3S4R434 201 aa12.91□□□□□ -0.34
SORT1-203ENST00000471996 C20orf144Q9BQM9 153 aa12.9□□□□□ -0.34
SORT1-203ENST00000471996 C14orf166Q9Y224 244 aaKnown RBP12.9□□□□□ -0.34
SORT1-203ENST00000471996 LRP1Q07954 4544 aaKnown RBP12.9□□□□□ -0.34
SORT1-203ENST00000471996 SNURFLB1AK76 121 aa12.89□□□□□ -0.35
SORT1-203ENST00000471996 ORM2P19652 201 aa12.89□□□□□ -0.35
SORT1-203ENST00000471996 BCL7BQ9BQE9 202 aa12.89□□□□□ -0.35
SORT1-203ENST00000471996 CXCL3P19876 107 aa12.88□□□□□ -0.35
SORT1-203ENST00000471996 S100A7P31151 101 aa12.88□□□□□ -0.35
SORT1-203ENST00000471996 CCR6P51684 374 aa12.88□□□□□ -0.35
SORT1-203ENST00000471996 KIR3DS1Q14943 382 aa12.88□□□□□ -0.35
SORT1-203ENST00000471996 PSG3Q16557 428 aa12.88□□□□□ -0.35
SORT1-203ENST00000471996 OR52I2Q8NH67 350 aa12.88□□□□□ -0.35
SORT1-203ENST00000471996 TMEM147Q9BVK8 224 aa12.88□□□□□ -0.35
SORT1-203ENST00000471996 RABL2AQ9UBK7 228 aaPredicted RBP12.88□□□□□ -0.35
SORT1-203ENST00000471996 EXTL2Q9UBQ6 330 aa12.88□□□□□ -0.35
SORT1-203ENST00000471996 MTFP1Q9UDX5 166 aa12.88□□□□□ -0.35
SORT1-203ENST00000471996 RABL2BQ9UNT1 228 aa12.88□□□□□ -0.35
SORT1-203ENST00000471996 TRAV9-2A0A087WT02 112 aa12.87□□□□□ -0.35
SORT1-203ENST00000471996 CRYM-AS1A6NIL9 109 aa12.87□□□□□ -0.35
SORT1-203ENST00000471996 MRPS10P82664 201 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms