RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SUMO4Q6EEV6 95 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 TMEM14BQ9NUH8 114 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 AHCTF1Q8WYP5 2266 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 ESPL1Q14674 2120 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 TRAV5A0A0B4J249 113 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 IGHV4-61A0A0C4DH41 118 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 TRGC2P03986 189 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 PIN1P1O15428 100 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 SPART-AS1P0CW21 52 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 ATP5G3P48201 142 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 B3GALT5-AS1P59052 145 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 ZNF506Q5JVG8 444 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 ZNF114Q8NC26 417 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 SDHCQ99643 169 aaPredicted RBP6.95□□□□□ -1.3
CD47-204ENST00000471694 SNHG12Q9BXW3 62 aa6.95□□□□□ -1.3
CD47-204ENST00000471694 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.94□□□□□ -1.3
CD47-204ENST00000471694 HOXB4P17483 251 aaPredicted RBP6.94□□□□□ -1.3
CD47-204ENST00000471694 PLNP26678 52 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 HIGD1CA8MV81 97 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 TRAV12-2A0A075B6T6 113 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 SEC11AP67812 179 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 KLF5Q13887 457 aaPredicted RBP6.94□□□□□ -1.3
CD47-204ENST00000471694 PMCHL1Q16048 86 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 ATOH7Q8N100 152 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 COQ2Q96H96 371 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 PSMG3Q9BT73 122 aaPredicted RBP6.94□□□□□ -1.3
CD47-204ENST00000471694 IGKV1D-13A0A0B4J2D9 117 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 NDUFB8O95169 186 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 IGKV1-13P0DP09 117 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 NOP10Q9NPE3 64 aaKnown RBP6.94□□□□□ -1.3
CD47-204ENST00000471694 CLPSL1A2RUU4 121 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 FAM90A9PA6NNJ1 464 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 Q8TAT8 98 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 MRPL27Q9P0M9 148 aaKnown RBP6.94□□□□□ -1.3
CD47-204ENST00000471694 ICOSQ9Y6W8 199 aa6.94□□□□□ -1.3
CD47-204ENST00000471694 PMCHL2Q9BQD1 86 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 C1orf43Q9BWL3 253 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 ZSWIM8A7E2V4 1837 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 LY6G6EA0A0G2JKS1 128 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 NDUFS5O43920 106 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 SLURP1P55000 103 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 TAL2Q16559 108 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 Q6ZQT7 251 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 SMDT1Q9H4I9 107 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 U3KQA8 63 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 IGKV1-5P01602 117 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 TRGV9Q99603 122 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 IGHV4-38-2P0DP08 117 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 TIRAPP58753 221 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 SLC25A34Q6PIV7 304 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 ZNF503Q96F45 646 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 FANCD2OSQ96PS1 177 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 A0A1B0GTI1 187 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 CD55P08174 381 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 ZNF48Q96MX3 618 aaPredicted RBP6.93□□□□□ -1.3
CD47-204ENST00000471694 SLX1AQ9BQ83 275 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 TMEM243Q9BU79 118 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 GREB1Q4ZG55 1949 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 ADORA2A-AS1P86434 159 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 CD200R1LQ6Q8B3 271 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 LINC00114Q6XXX2 140 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 C14orf178Q8N769 122 aaPredicted RBP6.93□□□□□ -1.3
CD47-204ENST00000471694 CSTL1Q9H114 145 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 IL36BQ9NZH7 164 aa6.93□□□□□ -1.3
CD47-204ENST00000471694 PRSS29PA6NIE9 313 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 IGHV3-30P01768 117 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 IGHV3-33P01772 117 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 IGHV3-30-3P0DP02 117 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 IGHV3-30-5P0DP03 117 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 ZNF562Q6V9R5 426 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 DERL1Q9BUN8 251 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 RFNGQ9Y644 331 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 IZUMO1RA6ND01 250 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.92□□□□□ -1.3
CD47-204ENST00000471694 LAGE3Q14657 143 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 VCYO14598 125 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 LEPROTO15243 131 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 ZNRF2Q8NHG8 242 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 HS3ST6Q96QI5 342 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 ZNRD1Q9P1U0 126 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 YLPM1P49750 1951 aaKnown RBP6.92□□□□□ -1.3
CD47-204ENST00000471694 FNDC1Q4ZHG4 1894 aaPredicted RBP6.92□□□□□ -1.3
CD47-204ENST00000471694 M0R2P5 195 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 IGKV1-39P01597 117 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 IGKV1D-39P04432 117 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 KLF12Q9Y4X4 402 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 LCTP09848 1927 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 NDUFA4O00483 81 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 SH2D1AO60880 128 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 CRLF1O75462 422 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 C5orf30Q96GV9 206 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 COL6A6A6NMZ7 2263 aa6.92□□□□□ -1.3
CD47-204ENST00000471694 ZDBF2Q9HCK1 2354 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 IGHV3-38A0A0C4DH36 116 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 RNF138Q8WVD3 245 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 C8orf49Q96NF6 230 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 TM2D2Q9BX73 214 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 MS4A6AQ9H2W1 248 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 FAM215AQ9Y5M1 114 aa6.91□□□□□ -1.3
CD47-204ENST00000471694 H3BMM0 161 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms