RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 B4DEV8 164 aa20■□□□□ 0.79
U2AF1-208ENST00000471250 LY6G6DO95868 133 aa20■□□□□ 0.79
U2AF1-208ENST00000471250 ELANEP08246 267 aa20■□□□□ 0.79
U2AF1-208ENST00000471250 TMEM88Q6PEY1 159 aa20■□□□□ 0.79
U2AF1-208ENST00000471250 CBLN2Q8IUK8 224 aa20■□□□□ 0.79
U2AF1-208ENST00000471250 ESM1Q9NQ30 184 aa20■□□□□ 0.79
U2AF1-208ENST00000471250 RPL23P62829 140 aaKnown RBP20■□□□□ 0.79
U2AF1-208ENST00000471250 FAM209BQ5JX69 171 aa20■□□□□ 0.79
U2AF1-208ENST00000471250 TCEAL7Q9BRU2 100 aa20■□□□□ 0.79
U2AF1-208ENST00000471250 SERTAD4Q9NUC0 356 aa20■□□□□ 0.79
U2AF1-208ENST00000471250 CLDN34H7C241 214 aa19.99■□□□□ 0.79
U2AF1-208ENST00000471250 C2CD4CQ8TF44 421 aa19.99■□□□□ 0.79
U2AF1-208ENST00000471250 MXRA5Q9NR99 2828 aa19.99■□□□□ 0.79
U2AF1-208ENST00000471250 TRBV19A0A075B6N1 114 aa19.98■□□□□ 0.79
U2AF1-208ENST00000471250 PGPA6NDG6 321 aa19.98■□□□□ 0.79
U2AF1-208ENST00000471250 H3BTX0 84 aa19.98■□□□□ 0.79
U2AF1-208ENST00000471250 NDUFA4O00483 81 aa19.98■□□□□ 0.79
U2AF1-208ENST00000471250 SMCO4Q9NRQ5 59 aa19.98■□□□□ 0.79
U2AF1-208ENST00000471250 A0A087WWC5 75 aa19.97■□□□□ 0.79
U2AF1-208ENST00000471250 FAM181BA6NEQ2 426 aa19.97■□□□□ 0.79
U2AF1-208ENST00000471250 RPL7P18124 248 aaKnown RBP19.97■□□□□ 0.79
U2AF1-208ENST00000471250 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.97■□□□□ 0.79
U2AF1-208ENST00000471250 MYOZ3Q8TDC0 251 aa19.97■□□□□ 0.79
U2AF1-208ENST00000471250 Q9H3A6 140 aa19.97■□□□□ 0.79
U2AF1-208ENST00000471250 TLN2Q9Y4G6 2542 aa19.97■□□□□ 0.79
U2AF1-208ENST00000471250 SRD5A1P18405 259 aa19.97■□□□□ 0.79
U2AF1-208ENST00000471250 ADIRFQ15847 76 aa19.97■□□□□ 0.79
U2AF1-208ENST00000471250 RNF152Q8N8N0 203 aa19.97■□□□□ 0.79
U2AF1-208ENST00000471250 METTL26Q96S19 204 aa19.97■□□□□ 0.79
U2AF1-208ENST00000471250 OTORQ9NRC9 128 aa19.97■□□□□ 0.79
U2AF1-208ENST00000471250 PEF1Q9UBV8 284 aaKnown RBP19.97■□□□□ 0.79
U2AF1-208ENST00000471250 TRBV20OR9-2A0A075B6H5 130 aa19.96■□□□□ 0.79
U2AF1-208ENST00000471250 BUB3O43684 328 aa19.96■□□□□ 0.79
U2AF1-208ENST00000471250 GGCTO75223 188 aaKnown RBP19.96■□□□□ 0.79
U2AF1-208ENST00000471250 RPLP1P05386 114 aaKnown RBP19.96■□□□□ 0.79
U2AF1-208ENST00000471250 RPL35P42766 123 aaKnown RBP19.96■□□□□ 0.79
U2AF1-208ENST00000471250 RPL15P61313 204 aaKnown RBP19.96■□□□□ 0.79
U2AF1-208ENST00000471250 Q6ZSV7 163 aa19.96■□□□□ 0.79
U2AF1-208ENST00000471250 OR8I2Q8N0Y5 310 aa19.96■□□□□ 0.79
U2AF1-208ENST00000471250 U3KQE9 123 aa19.96■□□□□ 0.79
U2AF1-208ENST00000471250 MYO9AB2RTY4 2548 aa19.95■□□□□ 0.78
U2AF1-208ENST00000471250 HELTA6NFD8 242 aa19.95■□□□□ 0.78
U2AF1-208ENST00000471250 C9JCJ5 164 aa19.95■□□□□ 0.78
U2AF1-208ENST00000471250 C17orf77Q96MU5 243 aa19.95■□□□□ 0.78
U2AF1-208ENST00000471250 EPDR1Q9UM22 224 aa19.95■□□□□ 0.78
U2AF1-208ENST00000471250 PEX7O00628 323 aa19.94■□□□□ 0.78
U2AF1-208ENST00000471250 SLC25A5P05141 298 aaKnown RBP19.94■□□□□ 0.78
U2AF1-208ENST00000471250 LINC01551Q86U37 167 aa19.94■□□□□ 0.78
U2AF1-208ENST00000471250 LYPD1Q8N2G4 141 aa19.94■□□□□ 0.78
U2AF1-208ENST00000471250 TMEM190Q8WZ59 177 aa19.94■□□□□ 0.78
U2AF1-208ENST00000471250 HIST1H2BAQ96A08 127 aa19.94■□□□□ 0.78
U2AF1-208ENST00000471250 TUBA4BQ9H853 241 aa19.94■□□□□ 0.78
U2AF1-208ENST00000471250 CDC42EP3Q9UKI2 254 aa19.94■□□□□ 0.78
U2AF1-208ENST00000471250 ACANP16112 2415 aa19.94■□□□□ 0.78
U2AF1-208ENST00000471250 ANK3Q12955 4377 aaKnown RBP19.94■□□□□ 0.78
U2AF1-208ENST00000471250 PDE6HQ13956 83 aa19.94■□□□□ 0.78
U2AF1-208ENST00000471250 C1orf194Q5T5A4 169 aa19.94■□□□□ 0.78
U2AF1-208ENST00000471250 C5orf17Q8NAS9 161 aa19.94■□□□□ 0.78
U2AF1-208ENST00000471250 ZNF418Q8TF45 676 aaPredicted RBP19.93■□□□□ 0.78
U2AF1-208ENST00000471250 SMAD5-AS1Q9Y6J3 95 aa19.93■□□□□ 0.78
U2AF1-208ENST00000471250 LY96Q9Y6Y9 160 aa19.93■□□□□ 0.78
U2AF1-208ENST00000471250 ZNF207O43670 478 aaKnown RBP19.92■□□□□ 0.78
U2AF1-208ENST00000471250 RNASE1P07998 156 aaKnown RBP19.92■□□□□ 0.78
U2AF1-208ENST00000471250 GNG5P63218 68 aa19.92■□□□□ 0.78
U2AF1-208ENST00000471250 UNQ9165/PRO28630Q6UXU0 137 aa19.92■□□□□ 0.78
U2AF1-208ENST00000471250 GPR82Q96P67 336 aa19.92■□□□□ 0.78
U2AF1-208ENST00000471250 OR5B12Q96R08 314 aa19.92■□□□□ 0.78
U2AF1-208ENST00000471250 SONP18583 2426 aaKnown RBP19.92■□□□□ 0.78
U2AF1-208ENST00000471250 TSPAN4O14817 238 aa19.91■□□□□ 0.78
U2AF1-208ENST00000471250 TAS2R60P59551 318 aa19.91■□□□□ 0.78
U2AF1-208ENST00000471250 SIGLEC15Q6ZMC9 328 aa19.91■□□□□ 0.78
U2AF1-208ENST00000471250 PGPEP1LA6NFU8 196 aa19.91■□□□□ 0.78
U2AF1-208ENST00000471250 APOHP02749 345 aaPredicted RBP19.91■□□□□ 0.78
U2AF1-208ENST00000471250 FOSL1P15407 271 aa19.91■□□□□ 0.78
U2AF1-208ENST00000471250 CNN1P51911 297 aaKnown RBP19.91■□□□□ 0.78
U2AF1-208ENST00000471250 RNF212Q495C1 297 aa19.91■□□□□ 0.78
U2AF1-208ENST00000471250 EXOC3-AS1Q8N2X6 119 aa19.91■□□□□ 0.78
U2AF1-208ENST00000471250 OCC1Q8TAD7 63 aa19.91■□□□□ 0.78
U2AF1-208ENST00000471250 UBE2E2Q96LR5 201 aa19.91■□□□□ 0.78
U2AF1-208ENST00000471250 PRELID1Q9Y255 219 aa19.91■□□□□ 0.78
U2AF1-208ENST00000471250 SLC17A3O00476 420 aa19.9■□□□□ 0.78
U2AF1-208ENST00000471250 KLHDC1Q8N7A1 406 aa19.9■□□□□ 0.78
U2AF1-208ENST00000471250 CTDSP1Q9GZU7 261 aa19.9■□□□□ 0.78
U2AF1-208ENST00000471250 TMEM242Q9NWH2 141 aa19.9■□□□□ 0.78
U2AF1-208ENST00000471250 MT-ND4LP03901 98 aa19.89■□□□□ 0.77
U2AF1-208ENST00000471250 LGALS1P09382 135 aaKnown RBP19.89■□□□□ 0.77
U2AF1-208ENST00000471250 CD99P14209 185 aa19.89■□□□□ 0.77
U2AF1-208ENST00000471250 ATF4P18848 351 aaPredicted RBP19.89■□□□□ 0.77
U2AF1-208ENST00000471250 GNG4P50150 75 aa19.89■□□□□ 0.77
U2AF1-208ENST00000471250 HILS1P60008 231 aa19.89■□□□□ 0.77
U2AF1-208ENST00000471250 CENPWQ5EE01 88 aa19.89■□□□□ 0.77
U2AF1-208ENST00000471250 ISOC2Q96AB3 205 aa19.89■□□□□ 0.77
U2AF1-208ENST00000471250 ATG101Q9BSB4 218 aa19.89■□□□□ 0.77
U2AF1-208ENST00000471250 A0A087X0K7 114 aa19.88■□□□□ 0.77
U2AF1-208ENST00000471250 ZNF253O75346 499 aa19.88■□□□□ 0.77
U2AF1-208ENST00000471250 IGF2BP2-AS1Q96M15 143 aa19.88■□□□□ 0.77
U2AF1-208ENST00000471250 LINC00479Q96M42 142 aa19.88■□□□□ 0.77
U2AF1-208ENST00000471250 AURKAIP1Q9NWT8 199 aaPredicted RBP19.88■□□□□ 0.77
U2AF1-208ENST00000471250 IGHV3-66A0A0C4DH42 116 aa19.87■□□□□ 0.77
U2AF1-208ENST00000471250 TCRAP04437 139 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms