RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 CLEC3BP05452 202 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 CTSGP08311 255 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 HIST1H1BP16401 226 aaKnown RBP3.63□□□□□ -1.83
SF3B1-208ENST00000470268 GPX4P36969 197 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-208ENST00000470268 CAMLGP49069 296 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 RND2P52198 227 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 FGF8P55075 233 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-208ENST00000470268 ZNF726P1Q15940 193 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 GCSAMLQ5JQS6 135 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 SPSB3Q6PJ21 355 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 FAM223AQ8IWN6 122 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 EIF4E3Q8N5X7 224 aaKnown RBP3.63□□□□□ -1.83
SF3B1-208ENST00000470268 TMEM116Q8NCL8 245 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 CACNG8Q8WXS5 425 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 ACY3Q96HD9 319 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 CHRDL1Q9BU40 450 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 SCRT1Q9BWW7 348 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 TREM1Q9NP99 234 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 C21orf62Q9NYP8 219 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 THYN1Q9P016 225 aa3.63□□□□□ -1.83
SF3B1-208ENST00000470268 LSM4Q9Y4Z0 139 aaKnown RBP3.63□□□□□ -1.83
SF3B1-208ENST00000470268 SETD2Q9BYW2 2564 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-208ENST00000470268 IGHV3-35A0A0C4DH35 117 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 SERTM2A0A1B0GWG4 89 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 TMEM218A2RU14 115 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 OR2T8A6NH00 312 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 PPP5D1E7EU14 171 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 SEC11BP0C7V7 166 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 IGLC1P0CG04 106 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 GATA2P23769 480 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-208ENST00000470268 GPR183P32249 361 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 AKR1C3P42330 323 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 CDX1P47902 265 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-208ENST00000470268 RAB2AP61019 212 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 HBG1P69891 147 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 HBG2P69892 147 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 DLK1P80370 383 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 ZNF90Q03938 601 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 ATP5G2Q06055 141 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 DEFB136Q30KP8 78 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 ZNF343Q6P1L6 599 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 CLEC19AQ6UXS0 136 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 TMEM144Q7Z5S9 345 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 COMMD1Q8N668 190 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 OR4X2Q8NGF9 303 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 OR4X1Q8NH49 305 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 VN1R17PQ8TDU5 208 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 SFT2D1Q8WV19 159 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 USMG5Q96IX5 58 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 UBE2E2Q96LR5 201 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 MGST2Q99735 147 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 GGACTQ9BVM4 153 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 NKX6-2Q9C056 277 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-208ENST00000470268 NPVFQ9HCQ7 196 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 RPRMQ9NS64 109 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 UQCC1Q9NVA1 299 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 WDR83OSQ9Y284 106 aa3.62□□□□□ -1.83
SF3B1-208ENST00000470268 IGHV3OR16-8A0A075B7F1 116 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.61□□□□□ -1.83
SF3B1-208ENST00000470268 TRBV7-1A0A0A6YYK4 115 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 A0A1B0GUS0 222 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 SMCO3A2RU48 225 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 FNDC10F2Z333 226 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 BMPR1BO00238 502 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 CYB5BO43169 146 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 SFTA3P0C7M3 94 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 SMIM6P0DI80 62 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 OR10J1P30954 320 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 FCGR2BP31994 310 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-208ENST00000470268 NPBWR1P48145 328 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 PPT1P50897 306 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 MFAP4P55083 255 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 ZNF266Q14584 549 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 HAGHQ16775 308 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 Q56UQ5 140 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 SAPCD1Q5SSQ6 148 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 LCN15Q6UWW0 184 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 THAP8Q8NA92 274 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 LYPD6BQ8NI32 183 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 GATAD1Q8WUU5 269 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 EEF1AKMT3Q96AZ1 226 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 SAT2Q96F10 170 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-208ENST00000470268 DUX3Q96PT4 197 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 TMEM147Q9BVK8 224 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 GPR61Q9BZJ8 451 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 WDR61Q9GZS3 305 aaKnown RBP3.61□□□□□ -1.83
SF3B1-208ENST00000470268 IGHV4OR15-8A0A075B7B6 117 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 A0A087WW49 117 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 A0A0G2JLM5 398 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 TCRBV4S1A1TA0A5B7 111 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 TGOLN2O43493 480 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 GNG7O60262 68 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 DFFBO76075 338 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 CD5P06127 495 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 LGALS1P09382 135 aaKnown RBP3.61□□□□□ -1.83
SF3B1-208ENST00000470268 NHLRC4P0CG21 123 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-208ENST00000470268 STAG3L3P0CL85 134 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 FGF7P21781 194 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 S100PP25815 95 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 CEBPGP53567 150 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms