RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SELENOKQ9Y6D0 94 aa8.5□□□□□ -1.05
SREBF1-209ENST00000470247 VWFP04275 2813 aa8.49□□□□□ -1.05
SREBF1-209ENST00000470247 A0A1W2PS18 150 aa8.49□□□□□ -1.05
SREBF1-209ENST00000470247 HMGB3O15347 200 aaKnown RBP8.49□□□□□ -1.05
SREBF1-209ENST00000470247 STAG3L2P0CL84 134 aa8.49□□□□□ -1.05
SREBF1-209ENST00000470247 STAG3L3P0CL85 134 aa8.49□□□□□ -1.05
SREBF1-209ENST00000470247 CDC34P49427 236 aaPredicted RBP8.49□□□□□ -1.05
SREBF1-209ENST00000470247 RAB5CP51148 216 aa8.49□□□□□ -1.05
SREBF1-209ENST00000470247 DPPA3Q6W0C5 159 aa8.49□□□□□ -1.05
SREBF1-209ENST00000470247 MBD3L1Q8WWY6 194 aa8.49□□□□□ -1.05
SREBF1-209ENST00000470247 ACTR3CQ9C0K3 210 aaPredicted RBP8.49□□□□□ -1.05
SREBF1-209ENST00000470247 CTXND1A0A1B0GTU2 59 aa8.48□□□□□ -1.05
SREBF1-209ENST00000470247 A0A1W2PPV4 95 aa8.48□□□□□ -1.05
SREBF1-209ENST00000470247 GP9P14770 177 aa8.48□□□□□ -1.05
SREBF1-209ENST00000470247 OR8I2Q8N0Y5 310 aa8.48□□□□□ -1.05
SREBF1-209ENST00000470247 FAM213BQ8TBF2 198 aa8.48□□□□□ -1.05
SREBF1-209ENST00000470247 TMEM14CQ9P0S9 112 aa8.48□□□□□ -1.05
SREBF1-209ENST00000470247 SORL1Q92673 2214 aa8.48□□□□□ -1.05
SREBF1-209ENST00000470247 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 H3BQ15 152 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 IFNA7P01567 189 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 IGLV1-51P01701 117 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 IGLC2P0DOY2 106 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 PYYP10082 97 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 RPL7P18124 248 aaKnown RBP8.47□□□□□ -1.05
SREBF1-209ENST00000470247 CD33P20138 364 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 CD300EQ496F6 205 aaPredicted RBP8.47□□□□□ -1.05
SREBF1-209ENST00000470247 LCN15Q6UWW0 184 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 TCF24Q7RTU0 167 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 SUN5Q8TC36 379 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 RNF141Q8WVD5 230 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 FXYD5Q96DB9 178 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 NARS2Q96I59 477 aaKnown RBP8.47□□□□□ -1.05
SREBF1-209ENST00000470247 PFDN2Q9UHV9 154 aa8.47□□□□□ -1.05
SREBF1-209ENST00000470247 ANK2Q01484 3957 aa8.46□□□□□ -1.05
SREBF1-209ENST00000470247 TRAV1-1A0A0B4J248 108 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 ZNF705EA8MWA4 302 aaPredicted RBP8.46□□□□□ -1.06
SREBF1-209ENST00000470247 WIPF1O43516 503 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 SAP30O75446 220 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 SNRPCP09234 159 aaKnown RBP8.46□□□□□ -1.06
SREBF1-209ENST00000470247 ARL14EPLP0DKL9 152 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 IGLL1P15814 213 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 S100A7P31151 101 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 CCL20P78556 96 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 PRR31Q5SQ13 230 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 SIGLEC15Q6ZMC9 328 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 S100A7AQ86SG5 101 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 BPIFA4PQ86YQ2 179 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 TMEM61Q8N0U2 210 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 LYPD6BQ8NI32 183 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 SAT2Q96F10 170 aaPredicted RBP8.46□□□□□ -1.06
SREBF1-209ENST00000470247 GRAMD2BQ96HH9 432 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 PAXXQ9BUH6 204 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 OR51M1Q9H341 326 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 TMPRSS5Q9H3S3 457 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 TMEM231Q9H6L2 316 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 ZNF586Q9NXT0 402 aa8.46□□□□□ -1.06
SREBF1-209ENST00000470247 A0A087X0K7 114 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 MAP1LC3B2A6NCE7 125 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 ZNF785A8K8V0 405 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 NMBP08949 121 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 H2AFB1P0C5Y9 115 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 OR10J4P0C629 311 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 HIST1H1EP10412 219 aaKnown RBP8.45□□□□□ -1.06
SREBF1-209ENST00000470247 GCHFRP30047 84 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 BMI1P35226 326 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 FGF8P55075 233 aaPredicted RBP8.45□□□□□ -1.06
SREBF1-209ENST00000470247 TAS2R45P59539 299 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 KHDC3LQ587J8 217 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 C9orf66Q5T8R8 295 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 PQLC2Q6ZP29 291 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 DCANP1Q8TF63 244 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 SFT2D1Q8WV19 159 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 PCNPQ8WW12 178 aaKnown RBP8.45□□□□□ -1.06
SREBF1-209ENST00000470247 GPR82Q96P67 336 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 MCRIP2Q9BUT9 160 aaKnown RBP8.45□□□□□ -1.06
SREBF1-209ENST00000470247 MAP1LC3BQ9GZQ8 125 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 HRH4Q9H3N8 390 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 UBQLN2Q9UHD9 624 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 RNF24Q9Y225 148 aa8.45□□□□□ -1.06
SREBF1-209ENST00000470247 TRAV25A0A0B4J276 109 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 HELTA6NFD8 242 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 H3BTX0 84 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 SOCS3O14543 225 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 TSPAN4O14817 238 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 OR7C2O60412 319 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 NDUFB4O95168 129 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 CXorf1O96002 111 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 CD5P06127 495 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 NBEAP1P0C6P0 100 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 GALR1P47211 349 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 INSL3P51460 131 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 ZNF767PQ75MW2 155 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 STXBP6Q8NFX7 210 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 DYNLRB2Q8TF09 96 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 MS4A6AQ9H2W1 248 aa8.44□□□□□ -1.06
SREBF1-209ENST00000470247 ZNF256Q9Y2P7 627 aaPredicted RBP8.44□□□□□ -1.06
SREBF1-209ENST00000470247 IGKV3-7A0A075B6H7 116 aa8.43□□□□□ -1.06
SREBF1-209ENST00000470247 TRBV19A0A075B6N1 114 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms