RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 A0A0G2JLM5 398 aa14.01□□□□□ -0.17
SMC4-211ENST00000469858 PGPA6NDG6 321 aa14.01□□□□□ -0.17
SMC4-211ENST00000469858 HNF1AP20823 631 aa14.01□□□□□ -0.17
SMC4-211ENST00000469858 MYCNOSP40205 109 aa14.01□□□□□ -0.17
SMC4-211ENST00000469858 LINC01551Q86U37 167 aa14.01□□□□□ -0.17
SMC4-211ENST00000469858 Q9H3A6 140 aa14.01□□□□□ -0.17
SMC4-211ENST00000469858 MYO9AB2RTY4 2548 aa14.01□□□□□ -0.17
SMC4-211ENST00000469858 HELTA6NFD8 242 aa14□□□□□ -0.17
SMC4-211ENST00000469858 MRPS12O15235 138 aaKnown RBP14□□□□□ -0.17
SMC4-211ENST00000469858 SLC25A5P05141 298 aaKnown RBP14□□□□□ -0.17
SMC4-211ENST00000469858 IGLC2P0DOY2 106 aa14□□□□□ -0.17
SMC4-211ENST00000469858 PSMB8P28062 276 aa14□□□□□ -0.17
SMC4-211ENST00000469858 RPL15P61313 204 aaKnown RBP14□□□□□ -0.17
SMC4-211ENST00000469858 RNF212Q495C1 297 aa14□□□□□ -0.17
SMC4-211ENST00000469858 OR4X2Q8NGF9 303 aa14□□□□□ -0.17
SMC4-211ENST00000469858 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14□□□□□ -0.17
SMC4-211ENST00000469858 GNG5P63218 68 aa14□□□□□ -0.17
SMC4-211ENST00000469858 C17orf77Q96MU5 243 aa14□□□□□ -0.17
SMC4-211ENST00000469858 PEX7O00628 323 aa13.99□□□□□ -0.17
SMC4-211ENST00000469858 OR8I2Q8N0Y5 310 aa13.99□□□□□ -0.17
SMC4-211ENST00000469858 TMEM86BQ8N661 226 aa13.99□□□□□ -0.17
SMC4-211ENST00000469858 TUBA4BQ9H853 241 aa13.99□□□□□ -0.17
SMC4-211ENST00000469858 RPH3ALQ9UNE2 315 aa13.99□□□□□ -0.17
SMC4-211ENST00000469858 TRBV19A0A075B6N1 114 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 CLPSL1A2RUU4 121 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 DNAJC9-AS1A6NH13 148 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 S100A7P31151 101 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 CENPWQ5EE01 88 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 SMR3AQ99954 134 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 RNF24Q9Y225 148 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 C9JCJ5 164 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 ZNF207O43670 478 aaKnown RBP13.98□□□□□ -0.17
SMC4-211ENST00000469858 RPL7P18124 248 aaKnown RBP13.98□□□□□ -0.17
SMC4-211ENST00000469858 SLC35B1P78383 322 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 EXOC3-AS1Q8N2X6 119 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 C15orf54Q8N8G6 183 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 OCC1Q8TAD7 63 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 LINC00479Q96M42 142 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 EPDR1Q9UM22 224 aa13.98□□□□□ -0.17
SMC4-211ENST00000469858 MT-ND4LP03901 98 aa13.97□□□□□ -0.17
SMC4-211ENST00000469858 GNG4P50150 75 aa13.97□□□□□ -0.17
SMC4-211ENST00000469858 CNN1P51911 297 aaKnown RBP13.97□□□□□ -0.17
SMC4-211ENST00000469858 C5orf17Q8NAS9 161 aa13.97□□□□□ -0.17
SMC4-211ENST00000469858 OR5B12Q96R08 314 aa13.97□□□□□ -0.17
SMC4-211ENST00000469858 METTL26Q96S19 204 aa13.97□□□□□ -0.17
SMC4-211ENST00000469858 TCEAL7Q9BRU2 100 aa13.97□□□□□ -0.17
SMC4-211ENST00000469858 IGHV3-66A0A0C4DH42 116 aa13.96□□□□□ -0.17
SMC4-211ENST00000469858 COLCA2A8K830 154 aa13.96□□□□□ -0.17
SMC4-211ENST00000469858 SLC17A3O00476 420 aa13.96□□□□□ -0.17
SMC4-211ENST00000469858 TEX38Q6PEX7 206 aa13.96□□□□□ -0.17
SMC4-211ENST00000469858 FAM24BQ8N5W8 94 aa13.96□□□□□ -0.17
SMC4-211ENST00000469858 HIST1H2BAQ96A08 127 aa13.96□□□□□ -0.17
SMC4-211ENST00000469858 OTORQ9NRC9 128 aa13.96□□□□□ -0.17
SMC4-211ENST00000469858 PRELID1Q9Y255 219 aa13.96□□□□□ -0.17
SMC4-211ENST00000469858 URGCP-MRPS24S4R325 110 aa13.96□□□□□ -0.17
SMC4-211ENST00000469858 IGHV3OR16-13A0A075B7E8 117 aa13.96□□□□□ -0.18
SMC4-211ENST00000469858 IGHV3-74A0A0B4J1X5 117 aa13.96□□□□□ -0.18
SMC4-211ENST00000469858 TMEM89A2RUT3 159 aa13.96□□□□□ -0.18
SMC4-211ENST00000469858 CTDSP1Q9GZU7 261 aa13.96□□□□□ -0.18
SMC4-211ENST00000469858 IGHV3-49A0A0A0MS15 119 aa13.95□□□□□ -0.18
SMC4-211ENST00000469858 TRAV34A0A0B4J273 112 aa13.95□□□□□ -0.18
SMC4-211ENST00000469858 FAM181BA6NEQ2 426 aa13.95□□□□□ -0.18
SMC4-211ENST00000469858 CLDN34H7C241 214 aa13.95□□□□□ -0.18
SMC4-211ENST00000469858 BUB3O43684 328 aa13.95□□□□□ -0.18
SMC4-211ENST00000469858 RPLP1P05386 114 aaKnown RBP13.95□□□□□ -0.18
SMC4-211ENST00000469858 UNQ9165/PRO28630Q6UXU0 137 aa13.95□□□□□ -0.18
SMC4-211ENST00000469858 SIGLEC15Q6ZMC9 328 aa13.95□□□□□ -0.18
SMC4-211ENST00000469858 Q8N2B8 174 aa13.95□□□□□ -0.18
SMC4-211ENST00000469858 TMEM242Q9NWH2 141 aa13.95□□□□□ -0.18
SMC4-211ENST00000469858 CDC42EP3Q9UKI2 254 aa13.95□□□□□ -0.18
SMC4-211ENST00000469858 K7EN84 100 aa13.94□□□□□ -0.18
SMC4-211ENST00000469858 NDUFA4O00483 81 aa13.94□□□□□ -0.18
SMC4-211ENST00000469858 APOHP02749 345 aaPredicted RBP13.94□□□□□ -0.18
SMC4-211ENST00000469858 CMTM2Q8TAZ6 248 aa13.94□□□□□ -0.18
SMC4-211ENST00000469858 IGF2BP2-AS1Q96M15 143 aa13.94□□□□□ -0.18
SMC4-211ENST00000469858 ATG101Q9BSB4 218 aa13.94□□□□□ -0.18
SMC4-211ENST00000469858 ESM1Q9NQ30 184 aa13.94□□□□□ -0.18
SMC4-211ENST00000469858 CXorf65A6NEN9 183 aa13.94□□□□□ -0.18
SMC4-211ENST00000469858 H7BYZ3 331 aa13.94□□□□□ -0.18
SMC4-211ENST00000469858 ATF4P18848 351 aaPredicted RBP13.94□□□□□ -0.18
SMC4-211ENST00000469858 FAM209BQ5JX69 171 aa13.94□□□□□ -0.18
SMC4-211ENST00000469858 SERTAD4Q9NUC0 356 aa13.94□□□□□ -0.18
SMC4-211ENST00000469858 PEF1Q9UBV8 284 aaKnown RBP13.94□□□□□ -0.18
SMC4-211ENST00000469858 SMAD5-AS1Q9Y6J3 95 aa13.94□□□□□ -0.18
SMC4-211ENST00000469858 LY96Q9Y6Y9 160 aa13.94□□□□□ -0.18
SMC4-211ENST00000469858 ISLRO14498 428 aa13.93□□□□□ -0.18
SMC4-211ENST00000469858 GGCTO75223 188 aaKnown RBP13.93□□□□□ -0.18
SMC4-211ENST00000469858 TCRAP04437 139 aa13.93□□□□□ -0.18
SMC4-211ENST00000469858 TAS2R60P59551 318 aa13.93□□□□□ -0.18
SMC4-211ENST00000469858 FOXE3Q13461 319 aa13.93□□□□□ -0.18
SMC4-211ENST00000469858 PDE6HQ13956 83 aa13.93□□□□□ -0.18
SMC4-211ENST00000469858 LYPD1Q8N2G4 141 aa13.93□□□□□ -0.18
SMC4-211ENST00000469858 ANAPC16Q96DE5 110 aa13.93□□□□□ -0.18
SMC4-211ENST00000469858 SGK494Q96LW2 274 aa13.93□□□□□ -0.18
SMC4-211ENST00000469858 NOTCH2Q04721 2471 aa13.93□□□□□ -0.18
SMC4-211ENST00000469858 ELANEP08246 267 aa13.92□□□□□ -0.18
SMC4-211ENST00000469858 UBE2G1P62253 170 aa13.92□□□□□ -0.18
SMC4-211ENST00000469858 ELOBQ15370 118 aa13.92□□□□□ -0.18
SMC4-211ENST00000469858 SFRP2Q96HF1 295 aa13.92□□□□□ -0.18
SMC4-211ENST00000469858 YPEL4Q96NS1 127 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms