RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ZNF441Q8N8Z8 693 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 ZNRF2Q8NHG8 242 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 MYOZ3Q8TDC0 251 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 RNF138Q8WVD3 245 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 SGK494Q96LW2 274 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 ASCL2Q99929 193 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 C20orf78Q9BR46 151 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 SCNM1Q9BWG6 230 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 FBXL15Q9H469 300 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 ZNF355PQ9NSJ1 428 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 NHP2Q9NX24 153 aaKnown RBP3.91□□□□□ -1.78
SF3B1-207ENST00000468925 DEC1Q9P2X7 70 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 B4GALT7Q9UBV7 327 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 HILPDAQ9Y5L2 63 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 GOLGA4Q13439 2230 aaKnown RBP3.91□□□□□ -1.78
SF3B1-207ENST00000468925 NCOA6Q14686 2063 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-207ENST00000468925 MED12LQ86YW9 2145 aa3.91□□□□□ -1.78
SF3B1-207ENST00000468925 CACNA1GO43497 2377 aa3.9□□□□□ -1.78
SF3B1-207ENST00000468925 TRBV25-1A0A075B6N4 114 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 IGKV3D-11A0A0A0MRZ8 115 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 MYMXA0A1B0GTQ4 84 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 LINC01546A6NGU7 62 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 CGB1A6NKQ9 187 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 SRRM4A7MD48 611 aaKnown RBP3.9□□□□□ -1.79
SF3B1-207ENST00000468925 PRSS46E5RG02 174 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 RRHO14718 337 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 SNAI2O43623 268 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 SYNGR3O43761 229 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 DPM2O94777 84 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 NPYP01303 97 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 IGLV2-14P01704 120 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 NHLRC4P0CG21 123 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-207ENST00000468925 ORM2P19652 201 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 PLNP26678 52 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 NMUP48645 174 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 FKBP1BP68106 108 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 ADORA2A-AS1P86434 159 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 TNFAIP6P98066 277 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-207ENST00000468925 EIF4EBP1Q13541 118 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-207ENST00000468925 NNATQ16517 81 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 GDF5OSQ5U4N7 250 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 MIC13Q5XKP0 118 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 ZNF497Q6ZNH5 498 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 Q6ZSN1 163 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 OR4C13Q8NGP0 309 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 OSR1Q8TAX0 266 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-207ENST00000468925 TSACCQ96A04 125 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-207ENST00000468925 NABP1Q96AH0 204 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 ZNF488Q96MN9 340 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 ZNF714Q96N38 554 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 NABP2Q9BQ15 211 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 EMC6Q9BV81 110 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 UBTD1Q9HAC8 227 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 NXT2Q9NPJ8 142 aaKnown RBP3.9□□□□□ -1.79
SF3B1-207ENST00000468925 HRASLS2Q9NWW9 162 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 TCF19Q9Y242 345 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 U3KQK5 164 aa3.9□□□□□ -1.79
SF3B1-207ENST00000468925 PHF3Q92576 2039 aaKnown RBP3.9□□□□□ -1.79
SF3B1-207ENST00000468925 SNRNP200O75643 2136 aaKnown RBP3.89□□□□□ -1.79
SF3B1-207ENST00000468925 BDP1A6H8Y1 2624 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 CCL15-CCL14A0A0B4J2E2 113 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 C19orf71A6NCJ1 209 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 UQCRQO14949 82 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 DUSP14O95147 198 aaKnown RBP3.89□□□□□ -1.79
SF3B1-207ENST00000468925 OR2H2O95918 312 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 IGKCP01834 107 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 CXCL10P02778 98 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 SP1P08047 785 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 LGALS1P09382 135 aaKnown RBP3.89□□□□□ -1.79
SF3B1-207ENST00000468925 FRMD6-AS1P0C7T7 363 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 CTGFP29279 349 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 DUTP33316 252 aaKnown RBP3.89□□□□□ -1.79
SF3B1-207ENST00000468925 RPL13AP40429 203 aaKnown RBP3.89□□□□□ -1.79
SF3B1-207ENST00000468925 ID1P41134 155 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 FXYD2P54710 66 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 UBE2D3P61077 147 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 UBE2D2P62837 147 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 RSPO1Q2MKA7 263 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-207ENST00000468925 POM121L1PQ3SYA9 428 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 Q6ZPA2 131 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 ORMDL3Q8N138 153 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 ZNF503Q96F45 646 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 HIST1H4GQ99525 98 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 MLST8Q9BVC4 326 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 SLC25A39Q9BZJ4 359 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-207ENST00000468925 DLL3Q9NYJ7 618 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 FAM30AQ9NZY2 134 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 GTF3C1Q12789 2109 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 ALPK2Q86TB3 2170 aa3.89□□□□□ -1.79
SF3B1-207ENST00000468925 MYO7BQ6PIF6 2116 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 NCKAP5O14513 1909 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 TRBV7-7A0A0K0K1E9 115 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 A0A1W2PRX2 142 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 TMEM30CPA0ZSE6 113 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 INS-IGF2F8WCM5 200 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 K7EMI3 77 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 M0R2P5 195 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 DUX1O43812 170 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 LTAP01374 205 aa3.88□□□□□ -1.79
SF3B1-207ENST00000468925 ORM1P02763 201 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms