RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 SLC35G3Q8N808 338 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 OR5D18Q8NGL1 313 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 OR52N1Q8NH53 320 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 OR5K1Q8NHB7 308 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 OTOSQ8NHW6 89 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 DTD1Q8TEA8 209 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 RNF133Q8WVZ7 376 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 PYDC1Q8WXC3 89 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 OR5P3Q8WZ94 311 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 PPP1R14BQ96C90 147 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 RTL8AQ9BWD3 113 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 CHST6Q9GZX3 395 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 CMC2Q9NRP2 79 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 SPANXB1Q9NS25 103 aaPredicted RBP2.37□□□□□ -2.03
GPNMB-207ENST00000468723 RPUSD1Q9UJJ7 312 aaKnown RBP2.37□□□□□ -2.03
GPNMB-207ENST00000468723 GNG8Q9UK08 70 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 OR52A1Q9UKL2 312 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 RAB26Q9ULW5 256 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 BAIAP2Q9UQB8 552 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 NIPBLQ6KC79 2804 aaeCLIP2.37□□□□□ -2.03
GPNMB-207ENST00000468723 DSCAML1Q8TD84 2053 aa2.37□□□□□ -2.03
GPNMB-207ENST00000468723 IGKV1D-17A0A075B6S4 117 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 TCRBV3S1A0A5B6 114 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 G3V2T6 193 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 J3QLW9 94 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 NPFFO15130 113 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 SSNA1O43805 119 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 OR7C2O60412 319 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 NRASP01111 189 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 LHBP01229 141 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 TTRP02766 147 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 HMGN1P05114 100 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 GTF2F2P13984 249 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 MUC1P15941 1255 aaPredicted RBP2.36□□□□□ -2.03
GPNMB-207ENST00000468723 ALOX5APP20292 161 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 SULT1A2P50226 295 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 MP68P56378 58 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 RAB2AP61019 212 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 MRPS15P82914 257 aaKnown RBP2.36□□□□□ -2.03
GPNMB-207ENST00000468723 EBI3Q14213 229 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 OGFRL1Q5TC84 451 aaPredicted RBP2.36□□□□□ -2.03
GPNMB-207ENST00000468723 TEX36Q5VZQ5 186 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 HCP5Q6MZN7 132 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 PRSS54Q6PEW0 395 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 SLC36A1Q7Z2H8 476 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 Q8N402 240 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 OR10K1Q8NGX5 313 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 OR10AC1Q8NH08 325 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 ZNRF2Q8NHG8 242 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 LEAP2Q969E1 77 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 CDCA4Q9BXL8 241 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 MROQ9BYG7 248 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 SLC22A4Q9H015 551 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 MS4A6AQ9H2W1 248 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 OR51I2Q9H344 312 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 AP4S1Q9Y587 144 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 HILPDAQ9Y5L2 63 aa2.36□□□□□ -2.03
GPNMB-207ENST00000468723 IGHV3-43A0A0B4J1X8 118 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 PNMA8CA0A1B0GUJ8 204 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 LOC107986453A0A1B0GWG9 222 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 A0A1W2PQL4 384 aaPredicted RBP2.35□□□□□ -2.03
GPNMB-207ENST00000468723 CLPSL1A2RUU4 121 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 K7EPK0 472 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 ISLRO14498 428 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 HRASP01112 189 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 KRASP01116 189 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 IL4P05112 153 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 OR5AC1P0C628 307 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 NFYBP25208 207 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 TGM4P49221 684 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 GTF2A1P52655 376 aaPredicted RBP2.35□□□□□ -2.03
GPNMB-207ENST00000468723 LINC00315P59091 139 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 ZNF816Q0VGE8 651 aaPredicted RBP2.35□□□□□ -2.03
GPNMB-207ENST00000468723 KCNJ8Q15842 424 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 ZNF181Q2M3W8 571 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 CLVS2Q5SYC1 327 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 LDLRAD2Q5SZI1 272 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 C12orf73Q69YU5 71 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 C10orf99Q6UWK7 81 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 SLC25A26Q70HW3 274 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 TRAPPC6BQ86SZ2 158 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 MIR7-3HGQ8N6C7 128 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 TEX29Q8N6K0 151 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 ZNF676Q8N7Q3 588 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 SPANXA2-OT1Q8N9U9 137 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 LY6G5BQ8NDX9 201 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 OR4S1Q8NGB4 309 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 OR51A4Q8NGJ6 313 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 SGMS2Q8NHU3 365 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 AQP3Q92482 292 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 ADAT3Q96EY9 351 aaPredicted RBP2.35□□□□□ -2.03
GPNMB-207ENST00000468723 BORCS8Q96FH0 119 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 YIPF3Q9GZM5 350 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 LINC00574Q9H8X3 128 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 CYTL1Q9NRR1 136 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 ATPIF1Q9UII2 106 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 LINC00527Q9UJ94 153 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 MPC1Q9Y5U8 109 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 R4GMQ9 66 aa2.35□□□□□ -2.03
GPNMB-207ENST00000468723 TRRAPQ9Y4A5 3859 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms