RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 C9JQL5 133 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 ATP6V0E1O15342 81 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 CDX1P47902 265 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-208ENST00000468300 CRIP2P52943 208 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-208ENST00000468300 SOHLH1Q5JUK2 328 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 DPPA3Q6W0C5 159 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 THAP8Q8NA92 274 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 SGMS2Q8NHU3 365 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 FAM213BQ8TBF2 198 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 FASNP49327 2511 aaKnown RBP6.47□□□□□ -1.37
BRCA1-208ENST00000468300 MPDU1O75352 247 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 IGHV4-59P01825 116 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 TYMSP04818 313 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 MIC13Q5XKP0 118 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 TEPPQ6URK8 271 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 LFNGQ8NES3 379 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 PPDPFQ9H3Y8 114 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 MOB4Q9Y3A3 225 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 CORTO00230 105 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 FOLR2P14207 255 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 AZU1P20160 251 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 KIAA0141Q14154 515 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-208ENST00000468300 LY6EQ16553 131 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 GUCA2BQ16661 112 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 TEX38Q6PEX7 206 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 Q6YL49 198 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 OR1N2Q8NGR9 330 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 MBD3L1Q8WWY6 194 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 C1RLQ9NZP8 487 aa6.47□□□□□ -1.37
BRCA1-208ENST00000468300 IGHV3-21A0A0B4J1V1 117 aa6.46□□□□□ -1.37
BRCA1-208ENST00000468300 TRAV1-1A0A0B4J248 108 aa6.46□□□□□ -1.37
BRCA1-208ENST00000468300 GATA2P23769 480 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-208ENST00000468300 BLCAPP62952 87 aa6.46□□□□□ -1.37
BRCA1-208ENST00000468300 ZNF90Q03938 601 aa6.46□□□□□ -1.37
BRCA1-208ENST00000468300 PDZD11Q5EBL8 140 aa6.46□□□□□ -1.37
BRCA1-208ENST00000468300 NPIPB3Q92617 1050 aa6.46□□□□□ -1.37
BRCA1-208ENST00000468300 RASL11BQ9BPW5 248 aa6.46□□□□□ -1.37
BRCA1-208ENST00000468300 FAM96BQ9Y3D0 163 aa6.46□□□□□ -1.37
BRCA1-208ENST00000468300 ABCA1O95477 2261 aa6.46□□□□□ -1.38
BRCA1-208ENST00000468300 TMEM89A2RUT3 159 aa6.46□□□□□ -1.38
BRCA1-208ENST00000468300 G3V318 75 aa6.46□□□□□ -1.38
BRCA1-208ENST00000468300 SUB1P53999 127 aaKnown RBP eCLIP6.46□□□□□ -1.38
BRCA1-208ENST00000468300 IL17RELQ6ZVW7 336 aa6.46□□□□□ -1.38
BRCA1-208ENST00000468300 LINC01551Q86U37 167 aa6.46□□□□□ -1.38
BRCA1-208ENST00000468300 STPG3Q8N7X2 389 aa6.46□□□□□ -1.38
BRCA1-208ENST00000468300 OR5B12Q96R08 314 aa6.46□□□□□ -1.38
BRCA1-208ENST00000468300 GTSF1LQ9H1H1 148 aa6.46□□□□□ -1.38
BRCA1-208ENST00000468300 PXMP4Q9Y6I8 212 aa6.46□□□□□ -1.38
BRCA1-208ENST00000468300 TRBV9A0A0B4J1U6 114 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 IL34Q6ZMJ4 242 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 ORAOV1Q8WV07 137 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 ADCYAP1P18509 176 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 HOXA5P20719 270 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 AKR1C1Q04828 323 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 OR5R1Q8NH85 324 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 SMIM9A6NGZ8 99 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 CD5LO43866 347 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 IGHG2P01859 326 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 IGF1P05019 195 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 OR10J1P30954 320 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 NPBWR1P48145 328 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 RND2P52198 227 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 NDUFA6P56556 154 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 PATE2Q6UY27 113 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 OR10G4Q8NGN3 311 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 OR10G9Q8NGN4 311 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 OR10G7Q8NGN6 311 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 TMEM37Q8WXS4 190 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 ACY3Q96HD9 319 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 SLC39A9Q9NUM3 307 aa6.45□□□□□ -1.38
BRCA1-208ENST00000468300 C17orf112F2Z3M2 114 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 NDUFB8O95169 186 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 IGLC1P0CG04 106 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 PPIFP30405 207 aaKnown RBP6.44□□□□□ -1.38
BRCA1-208ENST00000468300 ERVFC1-1P60608 527 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 CFHR3Q02985 330 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 MORN5Q5VZ52 161 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 SPATA31B1PQ5VZV4 182 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 ABHD5Q8WTS1 349 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 RARRES2Q99969 163 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 CSPG4Q6UVK1 2322 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 A0A1B0GV50 99 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 TCRBV4S1A1TA0A5B7 111 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 B5MCH6 92 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 C12orf54Q6X4T0 127 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 CYP2G1PQ6ZSU1 146 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 MRPL41Q8IXM3 137 aaKnown RBP6.44□□□□□ -1.38
BRCA1-208ENST00000468300 OR4X1Q8NH49 305 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 SLC35E1Q96K37 410 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 SIGMAR1Q99720 223 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 SMR3AQ99954 134 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 IGKV1-17P01599 117 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 ZNF503Q96F45 646 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 CTDSP1Q9GZU7 261 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 SLC25A22Q9H936 323 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 LINC00527Q9UJ94 153 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 S4R3C0 116 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 V9GYY9 64 aa6.44□□□□□ -1.38
BRCA1-208ENST00000468300 A8MZ25 164 aa6.43□□□□□ -1.38
BRCA1-208ENST00000468300 HMGB3O15347 200 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms