RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 WIZO95785 1651 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 RIMS1Q86UR5 1692 aaKnown RBP1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 RP1P56715 2156 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 KIF1BO60333 1816 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 SETBP1Q9Y6X0 1596 aa1.3□□□□□ -2.2
GAPVD1-211ENST00000467707 ADCY10Q96PN6 1610 aa1.3□□□□□ -2.2
GAPVD1-211ENST00000467707 C17orf112F2Z3M2 114 aa1.3□□□□□ -2.2
GAPVD1-211ENST00000467707 NFYBP25208 207 aa1.3□□□□□ -2.2
GAPVD1-211ENST00000467707 DSCR4P56555 118 aaPredicted RBP1.3□□□□□ -2.2
GAPVD1-211ENST00000467707 OR13C6PQ8NH95 151 aa1.3□□□□□ -2.2
GAPVD1-211ENST00000467707 BORCS5Q969J3 196 aa1.3□□□□□ -2.2
GAPVD1-211ENST00000467707 OR2J1Q9GZK6 312 aa1.3□□□□□ -2.2
GAPVD1-211ENST00000467707 CACNA1BQ00975 2339 aa1.3□□□□□ -2.2
GAPVD1-211ENST00000467707 CD109Q6YHK3 1445 aa1.3□□□□□ -2.2
GAPVD1-211ENST00000467707 MICAL3Q7RTP6 2002 aa1.3□□□□□ -2.2
GAPVD1-211ENST00000467707 KMT2BQ9UMN6 2715 aaPredicted RBP1.3□□□□□ -2.2
GAPVD1-211ENST00000467707 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 TRBV6-4A0A1B0GX49 114 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 RIIAD1A6NNX1 92 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 E7EUB6 86 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 IFNA14P01570 189 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 OR10J4P0C629 311 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 OR5D14Q8NGL3 314 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 ZNF431Q8TF32 576 aaPredicted RBP1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 PBDC1Q9BVG4 233 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 POPDC3Q9HBV1 291 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 ORMDL1Q9P0S3 153 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 FHAD1B1AJZ9 1412 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 UHRF1BP1Q6BDS2 1440 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 CCDC88BA6NC98 1476 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 EPRSP07814 1512 aaKnown RBP1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 TOP2AP11388 1531 aaKnown RBP1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 ABCC2Q92887 1545 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 TAF1LQ8IZX4 1826 aa1.29□□□□□ -2.2
GAPVD1-211ENST00000467707 IFT20Q8IY31 132 aa1.28□□□□□ -2.2
GAPVD1-211ENST00000467707 EXOC3-AS1Q8N2X6 119 aa1.28□□□□□ -2.2
GAPVD1-211ENST00000467707 LYSMD1Q96S90 227 aa1.28□□□□□ -2.2
GAPVD1-211ENST00000467707 GINS3Q9BRX5 216 aa1.28□□□□□ -2.2
GAPVD1-211ENST00000467707 MED29Q9NX70 200 aa1.28□□□□□ -2.2
GAPVD1-211ENST00000467707 PCTPQ9UKL6 214 aa1.28□□□□□ -2.2
GAPVD1-211ENST00000467707 UACAQ9BZF9 1416 aa1.28□□□□□ -2.2
GAPVD1-211ENST00000467707 GLI2P10070 1586 aa1.28□□□□□ -2.2
GAPVD1-211ENST00000467707 SHROOM2Q13796 1616 aa1.28□□□□□ -2.2
GAPVD1-211ENST00000467707 BCORL1Q5H9F3 1711 aa1.28□□□□□ -2.2
GAPVD1-211ENST00000467707 COL6A6A6NMZ7 2263 aa1.28□□□□□ -2.2
GAPVD1-211ENST00000467707 FBN3Q75N90 2809 aa1.28□□□□□ -2.2
GAPVD1-211ENST00000467707 SCN10AQ9Y5Y9 1956 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 PLXND1Q9Y4D7 1925 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 CUL7Q14999 1698 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 PBRM1Q86U86 1689 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 WDR97A6NE52 1622 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 MAP3K4Q9Y6R4 1608 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 KIAA0586Q9BVV6 1533 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 FANCAO15360 1455 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 IQSEC2Q5JU85 1478 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 WDR7Q9Y4E6 1490 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 A0A087WSZ3 146 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 TRAV10A0A0B4J240 114 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 CCL25O15444 150 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 NUPR1O60356 82 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 ZNF833PQ6ZTB9 187 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 NUP35Q8NFH5 326 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 OR5D16Q8NGK9 328 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 CDC26Q8NHZ8 85 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 TECTAO75443 2155 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 MED12LQ86YW9 2145 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 DENND4CQ5VZ89 1909 aa1.27□□□□□ -2.21
GAPVD1-211ENST00000467707 CEP350Q5VT06 3117 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 CFAP43Q8NDM7 1665 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 ALKQ9UM73 1620 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 ADAMTS12P58397 1594 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 CUX1P39880 1505 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 MAGI3Q5TCQ9 1506 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 ABCA10Q8WWZ4 1543 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 TRAV5A0A0B4J249 113 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 IGHV1-58A0A0C4DH39 117 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 CRHP06850 196 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 ZNF25P17030 456 aaPredicted RBP1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 OGNP20774 298 aaKnown RBP1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 RAB5CP51148 216 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 LYG2Q86SG7 212 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 PAIP2Q9BPZ3 127 aaKnown RBP1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 CCDC94Q9BW85 323 aaPredicted RBP1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 IL20Q9NYY1 176 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 TMEM14CQ9P0S9 112 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 PRDM2Q13029 1718 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 PREX1Q8TCU6 1659 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 ABCA5Q8WWZ7 1642 aa1.26□□□□□ -2.21
GAPVD1-211ENST00000467707 UHRF1BP1LA0JNW5 1464 aa1.25□□□□□ -2.21
GAPVD1-211ENST00000467707 TNRC6BQ9UPQ9 1833 aaKnown RBP1.25□□□□□ -2.21
GAPVD1-211ENST00000467707 ERC2-IT1O76042 136 aa1.25□□□□□ -2.21
GAPVD1-211ENST00000467707 TRGC2P03986 189 aa1.25□□□□□ -2.21
GAPVD1-211ENST00000467707 IFNA4P05014 189 aa1.25□□□□□ -2.21
GAPVD1-211ENST00000467707 TCTAP57738 103 aa1.25□□□□□ -2.21
GAPVD1-211ENST00000467707 CDK6Q00534 326 aa1.25□□□□□ -2.21
GAPVD1-211ENST00000467707 LINC00322Q6ZN03 302 aaPredicted RBP1.25□□□□□ -2.21
GAPVD1-211ENST00000467707 PPTC7Q8NI37 304 aa1.25□□□□□ -2.21
GAPVD1-211ENST00000467707 MUCL1Q96DR8 90 aa1.25□□□□□ -2.21
GAPVD1-211ENST00000467707 LINC00052Q96N35 136 aa1.25□□□□□ -2.21
GAPVD1-211ENST00000467707 PRRT1Q99946 306 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms