RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 S100A13Q99584 98 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 TTTY13Q9BZ97 58 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 NHP2Q9NX24 153 aaKnown RBP2.32□□□□□ -2.04
VPS50-209ENST00000467326 MPC1Q9Y5U8 109 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 IER3IP1Q9Y5U9 82 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 TRIOBPQ9H2D6 2365 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 TOPBP1Q92547 1522 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 XIRP1Q702N8 1843 aaKnown RBP2.31□□□□□ -2.04
VPS50-209ENST00000467326 MYH10P35580 1976 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 A0A0D9SG52 128 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 C3orf84H3BNL1 204 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 SDCBPO00560 298 aaPredicted RBP2.31□□□□□ -2.04
VPS50-209ENST00000467326 RER1O15258 196 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 YPEL1O60688 119 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 IGLV7-43P04211 117 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 TCRAP04437 139 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 IL4P05112 153 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 PYYP10082 97 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 IL7P13232 177 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 HLA-DRB4P13762 266 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 TMEM258P61165 79 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 C7orf65Q6ZTY9 151 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 GKN2Q86XP6 184 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 KCNRGQ8N5I3 272 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 RNF182Q8N6D2 247 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 SPANXA2-OT1Q8N9U9 137 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 ZC2HC1AQ96GY0 325 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 CIB3Q96Q77 187 aaPredicted RBP2.31□□□□□ -2.04
VPS50-209ENST00000467326 SNRNP25Q9BV90 132 aaKnown RBP2.31□□□□□ -2.04
VPS50-209ENST00000467326 LINC00574Q9H8X3 128 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 OR5V1Q9UGF6 321 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 HLA-DRB4X5D2U9 266 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 UACAQ9BZF9 1416 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 MED14O60244 1454 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 ABCC10Q5T3U5 1492 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 IFT140Q96RY7 1462 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 CEP164Q9UPV0 1460 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 MED1Q15648 1581 aaPredicted RBP2.31□□□□□ -2.04
VPS50-209ENST00000467326 KIF13BQ9NQT8 1826 aa2.31□□□□□ -2.04
VPS50-209ENST00000467326 A0A096LNJ9 63 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 FAM236AA0A1B0GUQ0 79 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 FAM236BA0A1B0GV22 79 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 TMEM235A6NFC5 223 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 ZNF727A8MUV8 499 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 K7ERJ3 54 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 TNFP01375 233 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 RBP4P02753 201 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 IGKV1-16P04430 117 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 SLC25A5P05141 298 aaKnown RBP2.3□□□□□ -2.04
VPS50-209ENST00000467326 TPT1P13693 172 aaKnown RBP2.3□□□□□ -2.04
VPS50-209ENST00000467326 ZNF14P17017 642 aaPredicted RBP2.3□□□□□ -2.04
VPS50-209ENST00000467326 CD24P25063 80 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 XCL1P47992 114 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 MRPS36P82909 103 aaKnown RBP2.3□□□□□ -2.04
VPS50-209ENST00000467326 FUT5Q11128 374 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 EBI3Q14213 229 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 DIAPH2-AS1Q14236 149 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 IQCJQ1A5X6 159 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 LGALSLQ3ZCW2 172 aaPredicted RBP2.3□□□□□ -2.04
VPS50-209ENST00000467326 LINC01545Q5VT33 79 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 TEN1Q86WV5 123 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 CYB561D1Q8N8Q1 229 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 TMEM105Q8N8V8 129 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 PFN4Q8NHR9 129 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 RAB37Q96AX2 223 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 HYLS1Q96M11 299 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 SDF2Q99470 211 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 RNF5Q99942 180 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 LINC00467Q9BRT7 94 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 DPY30Q9C005 99 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 SAR1AQ9NR31 198 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 ASF1BQ9NVP2 202 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 BET1LQ9NYM9 111 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 COMMD3Q9UBI1 195 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 TIMM9Q9Y5J7 89 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 U3KQK5 164 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 TROQ12816 1431 aaPredicted RBP2.3□□□□□ -2.04
VPS50-209ENST00000467326 GAPVD1Q14C86 1478 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 MBD5Q9P267 1494 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 PIK3C2AO00443 1686 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 COL4A4P53420 1690 aaPredicted RBP2.3□□□□□ -2.04
VPS50-209ENST00000467326 ADAMTSL1Q8N6G6 1762 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 CHD4Q14839 1912 aa2.3□□□□□ -2.04
VPS50-209ENST00000467326 CHD5Q8TDI0 1954 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 IGLV3-16A0A075B6K0 115 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 A0A1W2PQD3 144 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 FNDC10F2Z333 226 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 H3BQ85 93 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 LYRM1O43325 122 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 IGHV3-53P01767 116 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 HBDP02042 147 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 PMP2P02689 132 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 TRGC1P0CF51 173 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 UBA52P62987 128 aaKnown RBP2.29□□□□□ -2.04
VPS50-209ENST00000467326 ZNF117Q03924 483 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 KLRD1Q13241 179 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 SOSTDC1Q6X4U4 206 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 TMEM91Q6ZNR0 172 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 AAED1Q7RTV5 226 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 ADM2Q7Z4H4 148 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms