RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 PSG3Q16557 428 aa12.36□□□□□ -0.43
CHD1L-205ENST00000467213 ZADH2Q8N4Q0 377 aa12.36□□□□□ -0.43
CHD1L-205ENST00000467213 SRSF12Q8WXF0 261 aaKnown RBP12.36□□□□□ -0.43
CHD1L-205ENST00000467213 PPIAL4DF5H284 164 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 NCR2O95944 276 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 GOLT1AQ6ZVE7 132 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 PRNTQ86SH4 94 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 DEFB108BQ8NET1 73 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 A0A0G2JLM5 398 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 SLC25A17O43808 307 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 FAM104BQ5XKR9 115 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 ZNF474Q6S9Z5 364 aaPredicted RBP12.35□□□□□ -0.43
CHD1L-205ENST00000467213 SHANK2-AS3Q9BTD1 123 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 JKAMPQ9P055 326 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 VSTM5A8MXK1 200 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 HBDP02042 147 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 SCGB1A1P11684 91 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 HLA-DRB4P13762 266 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 PDE6HQ13956 83 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 ATP1A1-AS1Q5TC04 95 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 S100A7AQ86SG5 101 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 PRO3102Q9H379 93 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 NGBQ9NPG2 151 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 SIGLEC8Q9NYZ4 499 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 PSG8Q9UQ74 426 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 HLA-DRB4X5D2U9 266 aa12.35□□□□□ -0.43
CHD1L-205ENST00000467213 TMEM189A5PLL7 270 aa12.34□□□□□ -0.43
CHD1L-205ENST00000467213 SRSF2Q01130 221 aaKnown RBP12.34□□□□□ -0.43
CHD1L-205ENST00000467213 KIR3DS1Q14943 382 aa12.34□□□□□ -0.43
CHD1L-205ENST00000467213 ORMDL3Q8N138 153 aa12.34□□□□□ -0.43
CHD1L-205ENST00000467213 JMJD8Q96S16 334 aa12.34□□□□□ -0.43
CHD1L-205ENST00000467213 KAAG1Q9UBP8 84 aa12.34□□□□□ -0.43
CHD1L-205ENST00000467213 DMDP11532 3685 aa12.34□□□□□ -0.43
CHD1L-205ENST00000467213 INTS1Q8N201 2190 aaKnown RBP12.34□□□□□ -0.43
CHD1L-205ENST00000467213 A0A1W2PPM0 123 aa12.34□□□□□ -0.43
CHD1L-205ENST00000467213 H3BRN7 92 aa12.34□□□□□ -0.43
CHD1L-205ENST00000467213 RUSC1-AS1Q66K80 236 aa12.34□□□□□ -0.43
CHD1L-205ENST00000467213 SIGLEC15Q6ZMC9 328 aa12.34□□□□□ -0.43
CHD1L-205ENST00000467213 RNF5Q99942 180 aa12.34□□□□□ -0.43
CHD1L-205ENST00000467213 CIDEAO60543 219 aa12.33□□□□□ -0.44
CHD1L-205ENST00000467213 CSN3P07498 182 aa12.33□□□□□ -0.44
CHD1L-205ENST00000467213 I3L2K1 104 aa12.33□□□□□ -0.44
CHD1L-205ENST00000467213 CEACAM4O75871 244 aa12.33□□□□□ -0.44
CHD1L-205ENST00000467213 IGHV3-48P01763 117 aa12.33□□□□□ -0.44
CHD1L-205ENST00000467213 CCL3L1P16619 93 aa12.33□□□□□ -0.44
CHD1L-205ENST00000467213 ABHD17AQ96GS6 310 aa12.33□□□□□ -0.44
CHD1L-205ENST00000467213 GUCD1Q96NT3 240 aa12.33□□□□□ -0.44
CHD1L-205ENST00000467213 AHCTF1Q8WYP5 2266 aa12.33□□□□□ -0.44
CHD1L-205ENST00000467213 TRAV8-1A0A0A6YYK1 113 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 IFI27P40305 119 aaPredicted RBP12.32□□□□□ -0.44
CHD1L-205ENST00000467213 NHLH1Q02575 133 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 FDCSPQ8NFU4 85 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 NBEAQ8NFP9 2946 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 TEX22C9J3V5 150 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 MRPS12O15235 138 aaKnown RBP12.32□□□□□ -0.44
CHD1L-205ENST00000467213 PLA2G2CQ5R387 149 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 VHLLQ6RSH7 139 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 RITA1Q96K30 269 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 PRELID3AQ96N28 172 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 ZMAT4Q9H898 229 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 TPSG1Q9NRR2 321 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 SIGLEC9Q9Y336 463 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 WDFY4Q6ZS81 3184 aa12.32□□□□□ -0.44
CHD1L-205ENST00000467213 SAP30O75446 220 aa12.31□□□□□ -0.44
CHD1L-205ENST00000467213 FCN3O75636 299 aa12.31□□□□□ -0.44
CHD1L-205ENST00000467213 CRIP1P50238 77 aa12.31□□□□□ -0.44
CHD1L-205ENST00000467213 TMEM155Q4W5P6 130 aa12.31□□□□□ -0.44
CHD1L-205ENST00000467213 HES3Q5TGS1 186 aa12.31□□□□□ -0.44
CHD1L-205ENST00000467213 MCRIP2Q9BUT9 160 aaKnown RBP12.31□□□□□ -0.44
CHD1L-205ENST00000467213 CD40P25942 277 aa12.31□□□□□ -0.44
CHD1L-205ENST00000467213 FOXE3Q13461 319 aa12.31□□□□□ -0.44
CHD1L-205ENST00000467213 HCP5Q6MZN7 132 aa12.31□□□□□ -0.44
CHD1L-205ENST00000467213 EXOC3-AS1Q8N2X6 119 aa12.31□□□□□ -0.44
CHD1L-205ENST00000467213 IFI27L1Q96BM0 104 aa12.31□□□□□ -0.44
CHD1L-205ENST00000467213 ZNF414Q96IQ9 312 aa12.31□□□□□ -0.44
CHD1L-205ENST00000467213 ARRDC1-AS1Q9H2J1 176 aa12.31□□□□□ -0.44
CHD1L-205ENST00000467213 PPIAL4EA0A075B759 164 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 C17orf100A8MU93 164 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 H3BUT2 72 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 NDUFB3O43676 98 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 PPIAL4FP0DN26 164 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 RASL11BQ9BPW5 248 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 H0Y8G0 127 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 TMEM178BH3BS89 294 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 WT1P19544 449 aaPredicted RBP12.3□□□□□ -0.44
CHD1L-205ENST00000467213 LYZP61626 148 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 SRSF1Q07955 248 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHD1L-205ENST00000467213 DIAPH2-AS1Q14236 149 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 PLGLAQ15195 96 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 D6R8Y8 96 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 INSIG2Q9Y5U4 225 aa12.3□□□□□ -0.44
CHD1L-205ENST00000467213 IGHV1-8P0DP01 117 aa12.29□□□□□ -0.44
CHD1L-205ENST00000467213 FABP2P12104 132 aa12.29□□□□□ -0.44
CHD1L-205ENST00000467213 OR8A1Q8NGG7 326 aa12.29□□□□□ -0.44
CHD1L-205ENST00000467213 ZNF48Q96MX3 618 aaPredicted RBP12.29□□□□□ -0.44
CHD1L-205ENST00000467213 NAV3Q8IVL0 2385 aa12.29□□□□□ -0.44
CHD1L-205ENST00000467213 NDUFS8O00217 210 aa12.29□□□□□ -0.44
CHD1L-205ENST00000467213 CDX4O14627 284 aaPredicted RBP12.29□□□□□ -0.44
CHD1L-205ENST00000467213 IGKV1-17P01599 117 aa12.29□□□□□ -0.44
CHD1L-205ENST00000467213 PPP1R27Q86WC6 154 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms