RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 VAX2Q9UIW0 290 aa8.02□□□□□ -1.13
UBR4-210ENST00000466969 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.02□□□□□ -1.13
UBR4-210ENST00000466969 PITX3O75364 302 aa8.01□□□□□ -1.13
UBR4-210ENST00000466969 GNG2P59768 71 aa8.01□□□□□ -1.13
UBR4-210ENST00000466969 PRR4Q16378 134 aa8.01□□□□□ -1.13
UBR4-210ENST00000466969 C10orf67Q8IYJ2 551 aa8.01□□□□□ -1.13
UBR4-210ENST00000466969 ZNF680Q8NEM1 530 aa8.01□□□□□ -1.13
UBR4-210ENST00000466969 CYGBQ8WWM9 190 aa8.01□□□□□ -1.13
UBR4-210ENST00000466969 ACY3Q96HD9 319 aa8.01□□□□□ -1.13
UBR4-210ENST00000466969 SEC22AQ96IW7 307 aa8.01□□□□□ -1.13
UBR4-210ENST00000466969 CCDC90BQ9GZT6 254 aa8.01□□□□□ -1.13
UBR4-210ENST00000466969 RAB6AP20340 208 aa8□□□□□ -1.13
UBR4-210ENST00000466969 HERV-K104P61576 105 aa8□□□□□ -1.13
UBR4-210ENST00000466969 LYZP61626 148 aa8□□□□□ -1.13
UBR4-210ENST00000466969 FGL1Q08830 312 aa8□□□□□ -1.13
UBR4-210ENST00000466969 TOR2AQ5JU69 321 aa8□□□□□ -1.13
UBR4-210ENST00000466969 GFI1BQ5VTD9 330 aa8□□□□□ -1.13
UBR4-210ENST00000466969 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8□□□□□ -1.13
UBR4-210ENST00000466969 SH2D6Q7Z4S9 175 aa8□□□□□ -1.13
UBR4-210ENST00000466969 ZBTB8BQ8NAP8 495 aaPredicted RBP8□□□□□ -1.13
UBR4-210ENST00000466969 UFD1Q92890 307 aa8□□□□□ -1.13
UBR4-210ENST00000466969 VGLL1Q99990 258 aa8□□□□□ -1.13
UBR4-210ENST00000466969 PYGO2Q9BRQ0 406 aa8□□□□□ -1.13
UBR4-210ENST00000466969 ATG5Q9H1Y0 275 aa8□□□□□ -1.13
UBR4-210ENST00000466969 PSORS1C1Q9UIG5 152 aa8□□□□□ -1.13
UBR4-210ENST00000466969 KIF25-AS1Q9Y6Z4 181 aa8□□□□□ -1.13
UBR4-210ENST00000466969 V9GY05 133 aa8□□□□□ -1.13
UBR4-210ENST00000466969 TRAV8-1A0A0A6YYK1 113 aa7.99□□□□□ -1.13
UBR4-210ENST00000466969 SPINK4O60575 86 aa7.99□□□□□ -1.13
UBR4-210ENST00000466969 HTR2BP41595 481 aa7.99□□□□□ -1.13
UBR4-210ENST00000466969 TIRAPP58753 221 aa7.99□□□□□ -1.13
UBR4-210ENST00000466969 TRAM1Q15629 374 aa7.99□□□□□ -1.13
UBR4-210ENST00000466969 C14orf177Q52M58 125 aa7.99□□□□□ -1.13
UBR4-210ENST00000466969 ETFRF1Q6IPR1 90 aa7.99□□□□□ -1.13
UBR4-210ENST00000466969 FAM122CQ6P4D5 195 aa7.99□□□□□ -1.13
UBR4-210ENST00000466969 BEST4Q8NFU0 473 aa7.99□□□□□ -1.13
UBR4-210ENST00000466969 RMI2Q96E14 147 aa7.99□□□□□ -1.13
UBR4-210ENST00000466969 SLC25A22Q9H936 323 aa7.99□□□□□ -1.13
UBR4-210ENST00000466969 TRAV8-2A0A0B4J237 113 aa7.98□□□□□ -1.13
UBR4-210ENST00000466969 PHOX2AO14813 284 aa7.98□□□□□ -1.13
UBR4-210ENST00000466969 PSMA1P25786 263 aaKnown RBP7.98□□□□□ -1.13
UBR4-210ENST00000466969 SRSF3P84103 164 aaKnown RBP7.98□□□□□ -1.13
UBR4-210ENST00000466969 SPHARQ15513 63 aa7.98□□□□□ -1.13
UBR4-210ENST00000466969 CCDC190Q86UF4 302 aa7.98□□□□□ -1.13
UBR4-210ENST00000466969 C7orf33Q8WU49 177 aa7.98□□□□□ -1.13
UBR4-210ENST00000466969 MRGPRFQ96AM1 343 aa7.98□□□□□ -1.13
UBR4-210ENST00000466969 DPH3Q96FX2 82 aa7.98□□□□□ -1.13
UBR4-210ENST00000466969 SLC25A32Q9H2D1 315 aa7.98□□□□□ -1.13
UBR4-210ENST00000466969 RRP15Q9Y3B9 282 aaKnown RBP7.98□□□□□ -1.13
UBR4-210ENST00000466969 NXPH3O95157 252 aa7.97□□□□□ -1.13
UBR4-210ENST00000466969 BSXQ3C1V8 233 aa7.97□□□□□ -1.13
UBR4-210ENST00000466969 NHLRC2Q8NBF2 726 aa7.97□□□□□ -1.13
UBR4-210ENST00000466969 C11orf72Q8NBR9 251 aa7.97□□□□□ -1.13
UBR4-210ENST00000466969 RNASEH2CQ8TDP1 164 aaKnown RBP7.97□□□□□ -1.13
UBR4-210ENST00000466969 ZC2HC1AQ96GY0 325 aa7.97□□□□□ -1.13
UBR4-210ENST00000466969 PLCXD1Q9NUJ7 323 aa7.97□□□□□ -1.13
UBR4-210ENST00000466969 TRAV12-3A0A0B4J271 114 aa7.96□□□□□ -1.14
UBR4-210ENST00000466969 J3KRW8 73 aa7.96□□□□□ -1.14
UBR4-210ENST00000466969 PDCD5O14737 125 aa7.96□□□□□ -1.14
UBR4-210ENST00000466969 TAAR5O14804 337 aa7.96□□□□□ -1.14
UBR4-210ENST00000466969 IZUMO4Q1ZYL8 232 aa7.96□□□□□ -1.14
UBR4-210ENST00000466969 IBA57Q5T440 356 aaKnown RBP7.96□□□□□ -1.14
UBR4-210ENST00000466969 STEAP1BQ6NZ63 245 aa7.96□□□□□ -1.14
UBR4-210ENST00000466969 SPINK6Q6UWN8 80 aa7.96□□□□□ -1.14
UBR4-210ENST00000466969 TMEM91Q6ZNR0 172 aa7.96□□□□□ -1.14
UBR4-210ENST00000466969 C8orf59Q8N0T1 100 aaPredicted RBP7.96□□□□□ -1.14
UBR4-210ENST00000466969 OR1B1Q8NGR6 318 aa7.96□□□□□ -1.14
UBR4-210ENST00000466969 MRPL16Q9NX20 251 aaKnown RBP7.96□□□□□ -1.14
UBR4-210ENST00000466969 LSM2Q9Y333 95 aaKnown RBP7.96□□□□□ -1.14
UBR4-210ENST00000466969 KLF12Q9Y4X4 402 aa7.96□□□□□ -1.14
UBR4-210ENST00000466969 IGKV2D-24A0A075B6R9 120 aa7.95□□□□□ -1.14
UBR4-210ENST00000466969 TRAV26-2A0A0B4J265 109 aa7.95□□□□□ -1.14
UBR4-210ENST00000466969 SNRPGP15A8MWD9 76 aa7.95□□□□□ -1.14
UBR4-210ENST00000466969 GGTLC3B5MD39 225 aa7.95□□□□□ -1.14
UBR4-210ENST00000466969 CASQ2O14958 399 aaPredicted RBP7.95□□□□□ -1.14
UBR4-210ENST00000466969 SSX5O60225 188 aa7.95□□□□□ -1.14
UBR4-210ENST00000466969 DHRSXQ8N5I4 330 aa7.95□□□□□ -1.14
UBR4-210ENST00000466969 PARD6GQ9BYG4 376 aaPredicted RBP7.95□□□□□ -1.14
UBR4-210ENST00000466969 S100A14Q9HCY8 104 aa7.95□□□□□ -1.14
UBR4-210ENST00000466969 FKBP14Q9NWM8 211 aa7.95□□□□□ -1.14
UBR4-210ENST00000466969 ZFP92A6NM28 416 aa7.94□□□□□ -1.14
UBR4-210ENST00000466969 SCGNO76038 276 aa7.94□□□□□ -1.14
UBR4-210ENST00000466969 IGKV1-39P01597 117 aa7.94□□□□□ -1.14
UBR4-210ENST00000466969 IGKV1D-39P04432 117 aa7.94□□□□□ -1.14
UBR4-210ENST00000466969 FABP1P07148 127 aa7.94□□□□□ -1.14
UBR4-210ENST00000466969 TCL1AP56279 114 aa7.94□□□□□ -1.14
UBR4-210ENST00000466969 IQCF2Q8IXL9 164 aa7.94□□□□□ -1.14
UBR4-210ENST00000466969 GPR82Q96P67 336 aa7.94□□□□□ -1.14
UBR4-210ENST00000466969 C8orf4Q9NR00 106 aa7.94□□□□□ -1.14
UBR4-210ENST00000466969 TMEM56-RWDD3S4R434 201 aa7.94□□□□□ -1.14
UBR4-210ENST00000466969 IGKV1OR2-108A0A075B7D4 117 aa7.93□□□□□ -1.14
UBR4-210ENST00000466969 FAM231BA6NCW3 169 aa7.93□□□□□ -1.14
UBR4-210ENST00000466969 IFITM5A6NNB3 132 aa7.93□□□□□ -1.14
UBR4-210ENST00000466969 GPR31O00270 319 aa7.93□□□□□ -1.14
UBR4-210ENST00000466969 SFTA3P0C7M3 94 aa7.93□□□□□ -1.14
UBR4-210ENST00000466969 HSMCR30P0CW71 290 aa7.93□□□□□ -1.14
UBR4-210ENST00000466969 S100GP29377 79 aa7.93□□□□□ -1.14
UBR4-210ENST00000466969 HRH1P35367 487 aa7.93□□□□□ -1.14
UBR4-210ENST00000466969 ZNF90Q03938 601 aa7.93□□□□□ -1.14
UBR4-210ENST00000466969 C2orf83Q53S99 150 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms