RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 ZNF331Q9NQX6 463 aaPredicted RBP2.42□□□□□ -2.02
VPS13D-203ENST00000466732 TVP23BQ9NYZ1 205 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 WRAP73Q9P2S5 460 aaPredicted RBP2.42□□□□□ -2.02
VPS13D-203ENST00000466732 LSM7Q9UK45 103 aaKnown RBP2.42□□□□□ -2.02
VPS13D-203ENST00000466732 KLK12Q9UKR0 248 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 PXMP4Q9Y6I8 212 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 ITGB4P16144 1822 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 TNS2Q63HR2 1409 aa2.42□□□□□ -2.02
VPS13D-203ENST00000466732 TRPM6Q9BX84 2022 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 TRBV20-1A0A075B6N2 111 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 H3BMG7 143 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 SYS1-DBNDD2H3BUS1 97 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 J3QQQ9 107 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 UQCRQO14949 82 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 HCRTO43612 131 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 NUPR1O60356 82 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 ZNF737O75373 536 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 PGLYRP1O75594 196 aaPredicted RBP2.41□□□□□ -2.02
VPS13D-203ENST00000466732 SNCGO76070 127 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 C1orf105O95561 183 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 NCR2O95944 276 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 NAPSAO96009 420 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 HBE1P02100 147 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 IGKV5-2P06315 115 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 PTHLHP12272 177 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 ASIPP42127 132 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 GALR1P47211 349 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 PSMB3P49720 205 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 TMEM258P61165 79 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 RND3P61587 244 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 PPP1CAP62136 330 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 RPS24P62847 133 aaKnown RBP2.41□□□□□ -2.02
VPS13D-203ENST00000466732 SSBP1Q04837 148 aaKnown RBP2.41□□□□□ -2.02
VPS13D-203ENST00000466732 FUT5Q11128 374 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 EIF3IQ13347 325 aaKnown RBP2.41□□□□□ -2.02
VPS13D-203ENST00000466732 PMAIP1Q13794 54 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 IHHQ14623 411 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 IBA57Q5T440 356 aaKnown RBP2.41□□□□□ -2.02
VPS13D-203ENST00000466732 C9orf153Q5TBE3 101 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 LCN12Q6JVE5 192 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 DNM1P46Q6ZS02 220 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 SSX8Q7RTT4 187 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 SPATA12Q7Z6I5 190 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 C10orf126Q8N4M7 172 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 C3orf22Q8N5N4 141 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 DCAF4L2Q8NA75 395 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 OR51H1Q8NH63 302 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 OTOSQ8NHW6 89 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 MRPL30Q8TCC3 161 aaKnown RBP2.41□□□□□ -2.02
VPS13D-203ENST00000466732 SRSF12Q8WXF0 261 aaKnown RBP2.41□□□□□ -2.02
VPS13D-203ENST00000466732 RBMXL1Q96E39 390 aaKnown RBP2.41□□□□□ -2.02
VPS13D-203ENST00000466732 LINC00526Q96FQ7 95 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 BMFQ96LC9 184 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 PRELID3AQ96N28 172 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 RARRES2Q99969 163 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 PDCD1LG2Q9BQ51 273 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 RNF126Q9BV68 326 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 PBOV1Q9GZY1 135 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 BCL2L10Q9HD36 194 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 C21orf62Q9NYP8 219 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 MTFP1Q9UDX5 166 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 FIS1Q9Y3D6 152 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 TRAPPC1Q9Y5R8 145 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 NRXN2Q9P2S2 1712 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 ROBO1Q9Y6N7 1651 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 SCN2AQ99250 2005 aa2.41□□□□□ -2.02
VPS13D-203ENST00000466732 PTPRDP23468 1912 aa2.4□□□□□ -2.02
VPS13D-203ENST00000466732 PLXNA3P51805 1871 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 TRAV9-1A0A075B6T8 112 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 FAM236AA0A1B0GUQ0 79 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 FAM236BA0A1B0GV22 79 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 LY6LH3BQJ8 138 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 K7EQS6 105 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 M0R2P5 195 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 ANGPTL7O43827 346 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 EFNA2O43921 213 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 CXCL13O43927 109 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 APOMO95445 188 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 CECR9P0C854 216 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 C3orf79P0CE67 100 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 IGLL1P15814 213 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 CRISP2P16562 243 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 PRSS3P35030 304 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 PFN2P35080 140 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 LIM2P55344 173 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 PLGLB1Q02325 96 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 ZNF90Q03938 601 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 UNC119Q13432 240 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 WFDC2Q14508 124 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 RRN3P1Q2M238 152 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 CEACAM16Q2WEN9 425 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 ETDBQ3ZM63 59 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 Q499Y3 187 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 SPRNQ5BIV9 151 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 KLF17Q5JT82 389 aaPredicted RBP2.4□□□□□ -2.03
VPS13D-203ENST00000466732 FAM120AOSQ5T036 256 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 FAM27D1Q5T7N8 215 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 LYRM7Q5U5X0 104 aa2.4□□□□□ -2.03
VPS13D-203ENST00000466732 RPL7L1Q6DKI1 246 aaKnown RBP2.4□□□□□ -2.03
VPS13D-203ENST00000466732 TMEM14EPQ6UXP3 125 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms