RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 NEGR1Q7Z3B1 354 aa12.31□□□□□ -0.44
SNED1-208ENST00000466618 ZNRF1Q8ND25 227 aa12.31□□□□□ -0.44
SNED1-208ENST00000466618 FNDC4Q9H6D8 234 aaPredicted RBP12.31□□□□□ -0.44
SNED1-208ENST00000466618 PLEKHA3Q9HB20 300 aa12.31□□□□□ -0.44
SNED1-208ENST00000466618 A0A096LNT2 108 aa12.3□□□□□ -0.44
SNED1-208ENST00000466618 HIGD1CA8MV81 97 aa12.3□□□□□ -0.44
SNED1-208ENST00000466618 FAM216BQ8N7L0 139 aa12.3□□□□□ -0.44
SNED1-208ENST00000466618 CHCHD1Q96BP2 118 aaKnown RBP12.3□□□□□ -0.44
SNED1-208ENST00000466618 SELENOKQ9Y6D0 94 aa12.3□□□□□ -0.44
SNED1-208ENST00000466618 SLC25A16P16260 332 aa12.3□□□□□ -0.44
SNED1-208ENST00000466618 CD24P25063 80 aa12.3□□□□□ -0.44
SNED1-208ENST00000466618 LMO4P61968 165 aa12.3□□□□□ -0.44
SNED1-208ENST00000466618 FAM162BQ5T6X4 162 aa12.3□□□□□ -0.44
SNED1-208ENST00000466618 TMEM140Q9NV12 185 aa12.3□□□□□ -0.44
SNED1-208ENST00000466618 IDI2-AS1Q9NZ38 188 aa12.3□□□□□ -0.44
SNED1-208ENST00000466618 IGHV4-61A0A0C4DH41 118 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 FOXA3P55318 350 aaPredicted RBP12.29□□□□□ -0.44
SNED1-208ENST00000466618 SEC11AP67812 179 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 PET117Q6UWS5 81 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 GTF2H5Q6ZYL4 71 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 ATP5L2Q7Z4Y8 100 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 TPRX1Q8N7U7 411 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 OR13A1Q8NGR1 328 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 OR1N2Q8NGR9 330 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 RFESDQ8TAC1 157 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 FAM234AQ9H0X4 552 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 C7orf69Q9H7B7 122 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 K7EP34 96 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 COX8AP10176 69 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 H1FXQ92522 213 aaKnown RBP12.29□□□□□ -0.44
SNED1-208ENST00000466618 TMEM186Q96B77 213 aa12.29□□□□□ -0.44
SNED1-208ENST00000466618 IGKV1OR2-108A0A075B7D4 117 aa12.28□□□□□ -0.44
SNED1-208ENST00000466618 TMEM238LA0A1B0GVL6 79 aa12.28□□□□□ -0.44
SNED1-208ENST00000466618 C9orf118A6NHY6 69 aa12.28□□□□□ -0.44
SNED1-208ENST00000466618 PPIAL4GP0DN37 164 aa12.28□□□□□ -0.44
SNED1-208ENST00000466618 HTR1DP28221 377 aa12.28□□□□□ -0.44
SNED1-208ENST00000466618 TRAT1Q6PIZ9 186 aa12.28□□□□□ -0.44
SNED1-208ENST00000466618 NOTCH2Q04721 2471 aa12.28□□□□□ -0.44
SNED1-208ENST00000466618 SETXQ7Z333 2677 aaKnown RBP12.28□□□□□ -0.44
SNED1-208ENST00000466618 GPR12P47775 334 aa12.28□□□□□ -0.44
SNED1-208ENST00000466618 RTL8BQ17RB0 113 aa12.28□□□□□ -0.44
SNED1-208ENST00000466618 TMEM97Q5BJF2 176 aa12.28□□□□□ -0.44
SNED1-208ENST00000466618 MOB3BQ86TA1 216 aa12.28□□□□□ -0.44
SNED1-208ENST00000466618 C15orf61A6NNL5 157 aa12.27□□□□□ -0.45
SNED1-208ENST00000466618 H3BRM9 83 aa12.27□□□□□ -0.45
SNED1-208ENST00000466618 ERVK-16P61578 105 aa12.27□□□□□ -0.45
SNED1-208ENST00000466618 WFDC11Q8NEX6 87 aa12.27□□□□□ -0.45
SNED1-208ENST00000466618 Q96MF0 132 aa12.27□□□□□ -0.45
SNED1-208ENST00000466618 PMCHL2Q9BQD1 86 aa12.27□□□□□ -0.45
SNED1-208ENST00000466618 OR51B2Q9Y5P1 312 aa12.27□□□□□ -0.45
SNED1-208ENST00000466618 OTOGQ6ZRI0 2925 aa12.27□□□□□ -0.45
SNED1-208ENST00000466618 PRSS47A8MTI9 375 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 FNDC10F2Z333 226 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 C15orf65H3BRN8 121 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 MGST3O14880 152 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 SNAI2O43623 268 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 TAS2R45P59539 299 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 LINC01545Q5VT33 79 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 SAMD13Q5VXD3 122 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 MORN5Q5VZ52 161 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 CLUHP3Q96NS8 147 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 SLC25A33Q9BSK2 321 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 MAP1LC3CQ9BXW4 147 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 NDUFB3O43676 98 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 C8orf88P0DMB2 117 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 HBBP68871 147 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 LTC4SQ16873 150 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 BPIFA4PQ86YQ2 179 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 CCDC168Q8NDH2 2452 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 PPP1R35Q8TAP8 253 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 FAM167A-AS1Q96KT0 104 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 DCTN5Q9BTE1 182 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 SLC25A2Q9BXI2 301 aa12.26□□□□□ -0.45
SNED1-208ENST00000466618 H0Y8G0 127 aa12.25□□□□□ -0.45
SNED1-208ENST00000466618 LIPFP07098 398 aa12.25□□□□□ -0.45
SNED1-208ENST00000466618 FGF6P10767 208 aa12.25□□□□□ -0.45
SNED1-208ENST00000466618 BMI1P35226 326 aa12.25□□□□□ -0.45
SNED1-208ENST00000466618 LOXL1Q08397 574 aaPredicted RBP12.25□□□□□ -0.45
SNED1-208ENST00000466618 RPL39P5Q59GN2 51 aa12.25□□□□□ -0.45
SNED1-208ENST00000466618 NAA38Q9BRA0 125 aaKnown RBP12.25□□□□□ -0.45
SNED1-208ENST00000466618 AMMECR1Q9Y4X0 333 aaPredicted RBP12.25□□□□□ -0.45
SNED1-208ENST00000466618 TRAV5A0A0B4J249 113 aa12.25□□□□□ -0.45
SNED1-208ENST00000466618 H3BUT2 72 aa12.25□□□□□ -0.45
SNED1-208ENST00000466618 OR5AL1P0C617 328 aa12.25□□□□□ -0.45
SNED1-208ENST00000466618 HIST1H1EP10412 219 aaKnown RBP12.25□□□□□ -0.45
SNED1-208ENST00000466618 MYOD1P15172 320 aa12.25□□□□□ -0.45
SNED1-208ENST00000466618 PEX7O00628 323 aa12.24□□□□□ -0.45
SNED1-208ENST00000466618 APOA2P02652 100 aa12.24□□□□□ -0.45
SNED1-208ENST00000466618 ZNF329Q86UD4 541 aa12.24□□□□□ -0.45
SNED1-208ENST00000466618 NPFFR1Q9GZQ6 430 aa12.24□□□□□ -0.45
SNED1-208ENST00000466618 FOXA2Q9Y261 457 aaPredicted RBP12.24□□□□□ -0.45
SNED1-208ENST00000466618 PRRC2AP48634 2157 aaKnown RBP12.24□□□□□ -0.45
SNED1-208ENST00000466618 ZNF469Q96JG9 3925 aaPredicted RBP12.23□□□□□ -0.45
SNED1-208ENST00000466618 RNF223E7ERA6 249 aa12.23□□□□□ -0.45
SNED1-208ENST00000466618 GNG7O60262 68 aa12.23□□□□□ -0.45
SNED1-208ENST00000466618 ZFP36P26651 326 aaKnown RBP12.23□□□□□ -0.45
SNED1-208ENST00000466618 UBE2L3P68036 154 aaKnown RBP12.23□□□□□ -0.45
SNED1-208ENST00000466618 C16orf54Q6UWD8 224 aa12.23□□□□□ -0.45
SNED1-208ENST00000466618 TMEM14BQ9NUH8 114 aa12.23□□□□□ -0.45
SNED1-208ENST00000466618 PSMB11A5LHX3 300 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms