RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SIGLECL1Q8N7X8 197 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 OR8B3Q8NGG8 313 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 OR2H1Q9GZK4 316 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 POPDC3Q9HBV1 291 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 LAMTOR3Q9UHA4 124 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 HSPB8Q9UJY1 196 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 ERBINQ96RT1 1412 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 ARHGEF11O15085 1522 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 GLI3P10071 1580 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 PTPRBP23467 1997 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 FANCMQ8IYD8 2048 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 LOC107984640A0A0U1RRK4 108 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 A0A1B0GV90 55 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 IGKV2-29A2NJV5 120 aaPredicted RBP1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 IBA57-AS1B1ANH7 110 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 C9JAW5 83 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 CXCL1P09341 107 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 KDELR1P24390 212 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 EIF2B2P49770 351 aaKnown RBP1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 DYNLT3P51808 116 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 DNAJB13P59910 316 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 UBE2BP63146 152 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 MSMO1Q15800 293 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 NNATQ16517 81 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 C22orf39Q6P5X5 142 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 HIST3H2BBQ8N257 126 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 OR5A1Q8NGJ0 315 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 OR8D4Q8NGM9 314 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 OR4C6Q8NH72 309 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 ISOC1Q96CN7 298 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 PFDN5Q99471 154 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 YIPF3Q9GZM5 350 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 CYSTM1Q9H1C7 97 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 SLC39A9Q9NUM3 307 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 SPANXCQ9NY87 97 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 CKLFQ9UBR5 152 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 NAT8BQ9UHF3 227 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 BAIAP2Q9UQB8 552 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 HIGD1AQ9Y241 93 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 LAMTOR2Q9Y2Q5 125 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 LHFPL6Q9Y693 200 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 TCOF1Q13428 1488 aaKnown RBP1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 CDK5RAP2Q96SN8 1893 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 NUMA1Q14980 2115 aa1.54□□□□□ -2.16
CDC42BPA-211ENST00000466538 GGCTO75223 188 aaKnown RBP1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 CRPP02741 224 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 UBBP0CG47 229 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 S100A4P26447 101 aaKnown RBP1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 ARPP19P56211 112 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 RHOGP84095 191 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 Q1T7F1 81 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 FAM135BQ49AJ0 1406 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 RIC1Q4ADV7 1423 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 GLYATL3Q5SZD4 288 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 TMEM14EPQ6UXP3 125 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 FP248Q71RG6 208 aaPredicted RBP1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 DEFB128Q7Z7B8 93 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 RIMS1Q86UR5 1692 aaKnown RBP1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 BCL9LQ86UU0 1499 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 BPIFA4PQ86YQ2 179 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 OR2T10Q8NGZ9 312 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 PRG4Q92954 1404 aaPredicted RBP1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 TMEM106AQ96A25 262 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 SPEF2Q9C093 1822 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 OSTCQ9NRP0 149 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 SCN8AQ9UQD0 1980 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 WDR7Q9Y4E6 1490 aa1.53□□□□□ -2.16
CDC42BPA-211ENST00000466538 NALCNQ8IZF0 1738 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 COL4A5P29400 1685 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 A2MP01023 1474 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 OVOS2A0A0J9YW53 1432 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 TNS3Q68CZ2 1445 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 OVOS2Q6IE36 1432 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 TRAV5A0A0B4J249 113 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 IGHV1-58A0A0C4DH39 117 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 TRBV6-5A0A0K0K1A5 114 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 K7ERJ3 54 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 CST8O60676 142 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 OR2H2O95918 312 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 PMP2P02689 132 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 DBIP07108 87 aaKnown RBP1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 HIST1H1AQ02539 215 aaPredicted RBP1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 ZNF345Q14585 488 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 VMA21Q3ZAQ7 101 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 AAED1Q7RTV5 226 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 TRAPPC6BQ86SZ2 158 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 PDZD9Q8IXQ8 264 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 IFT20Q8IY31 132 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 C9orf163Q8N9P6 203 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 Q96M85 177 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 TSC22D3Q99576 134 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 HIST1H2BLQ99880 126 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 CBLN4Q9NTU7 201 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 COPZ2Q9P299 210 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 EPDR1Q9UM22 224 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 U3KQ87 197 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 TRIOBPQ9H2D6 2365 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 ANAPC1Q9H1A4 1944 aa1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 MYO5AQ9Y4I1 1855 aaKnown RBP1.52□□□□□ -2.17
CDC42BPA-211ENST00000466538 C5orf58C9J3I9 102 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms