RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 A0A1W2PPI3 338 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 SRRM4A7MD48 611 aaKnown RBP7.38□□□□□ -1.23
HPS4-208ENST00000464362 PRSS2P07478 247 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 LMO1P25800 156 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 VDAC2P45880 294 aaPredicted RBP7.38□□□□□ -1.23
HPS4-208ENST00000464362 PRR30Q53SZ7 412 aaPredicted RBP7.38□□□□□ -1.23
HPS4-208ENST00000464362 MPV17L2Q567V2 206 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 FAM71F2Q6NXP2 309 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 ORMDL3Q8N138 153 aa7.38□□□□□ -1.23
HPS4-208ENST00000464362 FNDC4Q9H6D8 234 aaPredicted RBP7.38□□□□□ -1.23
HPS4-208ENST00000464362 IGHV3OR16-12A0A075B7B8 117 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 IGHV2-26A0A0B4J1V2 119 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 TMEM178BH3BS89 294 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 TDGF1P3P51864 188 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 Q6ZWC4 215 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 KIAA1549LQ6ZVL6 1849 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 NAV2Q8IVL1 2488 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 A0A087X0K7 114 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 A0A0G2JNJ9 132 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 TGFAP01135 160 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 TRGV3P03979 118 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 TCRAP04437 139 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 SLC25A48Q6ZT89 311 aaKnown RBP7.37□□□□□ -1.23
HPS4-208ENST00000464362 Q9UFV3 132 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 SMKR1H3BMG3 65 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 NUPR1O60356 82 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 SRD5A1P18405 259 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 SMAGPQ0VAQ4 97 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 RNF138Q8WVD3 245 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 PTPRSQ13332 1948 aa7.37□□□□□ -1.23
HPS4-208ENST00000464362 FAM90A9PA6NNJ1 464 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 WT1P19544 449 aaPredicted RBP7.36□□□□□ -1.23
HPS4-208ENST00000464362 PDLIM4P50479 330 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 DLX6P56179 175 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 PSG9Q00887 426 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 ZNF672Q499Z4 452 aaPredicted RBP7.36□□□□□ -1.23
HPS4-208ENST00000464362 SLC25A39Q9BZJ4 359 aaPredicted RBP7.36□□□□□ -1.23
HPS4-208ENST00000464362 OTORQ9NRC9 128 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 FAM181BA6NEQ2 426 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 IGHG3P01860 377 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 A0A1W2PS18 150 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 C15orf65H3BRN8 121 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 SLAQ13239 276 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 OR10J3Q5JRS4 329 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 Q6ZVH6 145 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 TMEM219Q86XT9 240 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 TMEM167AQ8TBQ9 72 aa7.36□□□□□ -1.23
HPS4-208ENST00000464362 IGHV1-3A0A0C4DH29 117 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 TYMSP04818 313 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 C17orf58Q2M2W7 97 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 C8orf46Q8TAG6 207 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 HIVEP2P31629 2446 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 D6R8Y8 96 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 NDUFA3O95167 84 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 COL8A2P25067 703 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 RHOGP84095 191 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 WT1-ASQ06250 92 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 TDRG1Q3Y452 100 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 CRIP3Q6Q6R5 217 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 RCHY1Q96PM5 261 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 TMEM14BQ9NUH8 114 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 ADAMTS9Q9P2N4 1935 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 MBD3L4A6NDZ8 208 aaPredicted RBP7.35□□□□□ -1.23
HPS4-208ENST00000464362 MBD3L3A6NE82 208 aaPredicted RBP7.35□□□□□ -1.23
HPS4-208ENST00000464362 MBD3L5A6NJ08 208 aaPredicted RBP7.35□□□□□ -1.23
HPS4-208ENST00000464362 FRMD6-AS1P0C7T7 363 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 ATP5J2P56134 94 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 HERVK_113P61574 105 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 ATP5G2Q06055 141 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 C11orf53Q8IXP5 236 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 MBD3L2Q8NHZ7 208 aaPredicted RBP7.35□□□□□ -1.23
HPS4-208ENST00000464362 FAM168AQ92567 244 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 JKAMPQ9P055 326 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 PEF1Q9UBV8 284 aaKnown RBP7.35□□□□□ -1.23
HPS4-208ENST00000464362 CFAP54Q96N23 3096 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 TSPOP30536 169 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 LEPP41159 167 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 TPTE2P1Q5T6R2 138 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 AMMECR1LQ6DCA0 310 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 Q8NFD4 153 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 BEX4Q9NWD9 120 aaPredicted RBP7.35□□□□□ -1.23
HPS4-208ENST00000464362 SIGLEC9Q9Y336 463 aa7.35□□□□□ -1.23
HPS4-208ENST00000464362 OR11H12B2RN74 326 aa7.34□□□□□ -1.23
HPS4-208ENST00000464362 ARMS2P0C7Q2 107 aa7.34□□□□□ -1.23
HPS4-208ENST00000464362 SSBP2P81877 361 aaPredicted RBP7.34□□□□□ -1.23
HPS4-208ENST00000464362 OR11H1Q8NG94 326 aa7.34□□□□□ -1.23
HPS4-208ENST00000464362 OR11H2Q8NH07 326 aa7.34□□□□□ -1.23
HPS4-208ENST00000464362 C18orf32Q8TCD1 76 aa7.34□□□□□ -1.23
HPS4-208ENST00000464362 NHP2Q9NX24 153 aaKnown RBP7.34□□□□□ -1.23
HPS4-208ENST00000464362 NDPQ00604 133 aa7.34□□□□□ -1.23
HPS4-208ENST00000464362 TMEM170BQ5T4T1 132 aa7.34□□□□□ -1.23
HPS4-208ENST00000464362 LYZL1Q6UWQ5 148 aa7.34□□□□□ -1.23
HPS4-208ENST00000464362 AMN1Q8IY45 258 aa7.34□□□□□ -1.23
HPS4-208ENST00000464362 APOMO95445 188 aa7.34□□□□□ -1.23
HPS4-208ENST00000464362 RPS20P60866 119 aaKnown RBP7.34□□□□□ -1.23
HPS4-208ENST00000464362 UBE2V1Q13404 147 aa7.34□□□□□ -1.23
HPS4-208ENST00000464362 LY6DQ14210 128 aa7.34□□□□□ -1.23
HPS4-208ENST00000464362 K7EN84 100 aa7.33□□□□□ -1.24
HPS4-208ENST00000464362 SPACA3Q8IXA5 215 aa7.33□□□□□ -1.24
HPS4-208ENST00000464362 V9GYV3 84 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms