RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 ZNF491Q8N8L2 437 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 TXN2Q99757 166 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 FBXL7Q9UJT9 491 aa17.04■□□□□ 0.32
PDLIM2-216ENST00000464275 F8W735 103 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-216ENST00000464275 SCGB2A1O75556 95 aa17.03■□□□□ 0.32
PDLIM2-216ENST00000464275 PIFOQ8TCI5 191 aa17.03■□□□□ 0.32
PDLIM2-216ENST00000464275 BLNKQ8WV28 456 aa17.03■□□□□ 0.32
PDLIM2-216ENST00000464275 TMEM190Q8WZ59 177 aa17.03■□□□□ 0.32
PDLIM2-216ENST00000464275 RNF125Q96EQ8 232 aa17.03■□□□□ 0.32
PDLIM2-216ENST00000464275 AMY1AP04745 511 aa17.02■□□□□ 0.32
PDLIM2-216ENST00000464275 FCGR2BP31994 310 aaPredicted RBP17.02■□□□□ 0.32
PDLIM2-216ENST00000464275 ECSCRQ19T08 205 aa17.02■□□□□ 0.32
PDLIM2-216ENST00000464275 C1orf194Q5T5A4 169 aa17.02■□□□□ 0.32
PDLIM2-216ENST00000464275 LEMD1Q68G75 181 aa17.02■□□□□ 0.32
PDLIM2-216ENST00000464275 VN1R17PQ8TDU5 208 aa17.02■□□□□ 0.32
PDLIM2-216ENST00000464275 SHANK2-AS3Q9BTD1 123 aa17.02■□□□□ 0.32
PDLIM2-216ENST00000464275 HIF1ANQ9NWT6 349 aa17.02■□□□□ 0.32
PDLIM2-216ENST00000464275 KIR2DL5BA0A0G2JN68 375 aa17.02■□□□□ 0.31
PDLIM2-216ENST00000464275 KIR2DL5BA0A0G2JPC4 375 aa17.02■□□□□ 0.31
PDLIM2-216ENST00000464275 H3BRN7 92 aa17.02■□□□□ 0.31
PDLIM2-216ENST00000464275 PEX7O00628 323 aa17.02■□□□□ 0.31
PDLIM2-216ENST00000464275 ZNF600Q6ZNG1 722 aa17.02■□□□□ 0.31
PDLIM2-216ENST00000464275 S100A7AQ86SG5 101 aa17.02■□□□□ 0.31
PDLIM2-216ENST00000464275 KIR2DL5AQ8N109 375 aa17.02■□□□□ 0.31
PDLIM2-216ENST00000464275 TP53TG3Q9ULZ0 132 aa17.02■□□□□ 0.31
PDLIM2-216ENST00000464275 IL4P05112 153 aa17.01■□□□□ 0.31
PDLIM2-216ENST00000464275 SSTP61278 116 aa17.01■□□□□ 0.31
PDLIM2-216ENST00000464275 BAGE3Q86Y29 109 aa17.01■□□□□ 0.31
PDLIM2-216ENST00000464275 BAGE2Q86Y30 109 aa17.01■□□□□ 0.31
PDLIM2-216ENST00000464275 RNASE7Q9H1E1 156 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-216ENST00000464275 GRIFINA4D1Z8 144 aa17■□□□□ 0.31
PDLIM2-216ENST00000464275 TMEM136Q6ZRR5 245 aa17■□□□□ 0.31
PDLIM2-216ENST00000464275 TMEM219Q86XT9 240 aa17■□□□□ 0.31
PDLIM2-216ENST00000464275 WIPF2Q8TF74 440 aaPredicted RBP17■□□□□ 0.31
PDLIM2-216ENST00000464275 NAT8BQ9UHF3 227 aa17■□□□□ 0.31
PDLIM2-216ENST00000464275 COL12A1Q99715 3063 aa17■□□□□ 0.31
PDLIM2-216ENST00000464275 SPG11Q96JI7 2443 aa17■□□□□ 0.31
PDLIM2-216ENST00000464275 IZUMO1RA6ND01 250 aa17■□□□□ 0.31
PDLIM2-216ENST00000464275 NUPR1O60356 82 aa17■□□□□ 0.31
PDLIM2-216ENST00000464275 SERF1AO75920 110 aa17■□□□□ 0.31
PDLIM2-216ENST00000464275 HIST1H1EP10412 219 aaKnown RBP17■□□□□ 0.31
PDLIM2-216ENST00000464275 MGST1P10620 155 aaKnown RBP17■□□□□ 0.31
PDLIM2-216ENST00000464275 LINC01356Q8N9X3 169 aa17■□□□□ 0.31
PDLIM2-216ENST00000464275 EPDR1Q9UM22 224 aa17■□□□□ 0.31
PDLIM2-216ENST00000464275 UBR5O95071 2799 aaPredicted RBP17■□□□□ 0.31
PDLIM2-216ENST00000464275 PGPA6NDG6 321 aa16.99■□□□□ 0.31
PDLIM2-216ENST00000464275 SLC25A5P05141 298 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-216ENST00000464275 SNRPCP09234 159 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-216ENST00000464275 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.99■□□□□ 0.31
PDLIM2-216ENST00000464275 A0A096LNT2 108 aa16.98■□□□□ 0.31
PDLIM2-216ENST00000464275 SH2D7A6NKC9 451 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-216ENST00000464275 LINC00310P59036 64 aa16.98■□□□□ 0.31
PDLIM2-216ENST00000464275 MRPL52Q86TS9 123 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-216ENST00000464275 RNF24Q9Y225 148 aa16.98■□□□□ 0.31
PDLIM2-216ENST00000464275 A0A1B0GUS0 222 aa16.98■□□□□ 0.31
PDLIM2-216ENST00000464275 LINC01548A6NM66 108 aa16.98■□□□□ 0.31
PDLIM2-216ENST00000464275 IGHV3-23P01764 117 aa16.98■□□□□ 0.31
PDLIM2-216ENST00000464275 BPIFA4PQ86YQ2 179 aa16.98■□□□□ 0.31
PDLIM2-216ENST00000464275 C5orf17Q8NAS9 161 aa16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 Q9H3A6 140 aa16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 ZNF586Q9NXT0 402 aa16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 OR2T8A6NH00 312 aa16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 G3V318 75 aa16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 CTSGP08311 255 aa16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 CRIP2P52943 208 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 RHOGP84095 191 aa16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 USF2Q15853 346 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 TMEM183BQ1AE95 376 aa16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 ZNF502Q8TBZ5 544 aa16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 MBD6Q96DN6 1003 aa16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 GRAMD2BQ96HH9 432 aa16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 SAMD10Q9BYL1 202 aa16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 BEX4Q9NWD9 120 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-216ENST00000464275 ASH1LQ9NR48 2969 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-216ENST00000464275 C15orf32Q32M92 178 aa16.96■□□□□ 0.31
PDLIM2-216ENST00000464275 TEX43Q6ZNM6 134 aa16.96■□□□□ 0.31
PDLIM2-216ENST00000464275 Q6ZWC4 215 aa16.96■□□□□ 0.31
PDLIM2-216ENST00000464275 OR4F17Q8NGA8 305 aa16.96■□□□□ 0.31
PDLIM2-216ENST00000464275 ZNF331Q9NQX6 463 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-216ENST00000464275 OTORQ9NRC9 128 aa16.96■□□□□ 0.31
PDLIM2-216ENST00000464275 SERTAD4Q9NUC0 356 aa16.96■□□□□ 0.31
PDLIM2-216ENST00000464275 A6NDX4 124 aa16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 AVPP01185 164 aa16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 GNG5P63218 68 aa16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 SIGLECL1Q8N7X8 197 aa16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 LINC00479Q96M42 142 aa16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 KLF12Q9Y4X4 402 aa16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 SOX21Q9Y651 276 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 FAM208BQ5VWN6 2430 aa16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 ZNF705FA8MVS1 300 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 H3BUX3 64 aa16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 ZNF705DP0CH99 300 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 ZNF705BP0CI00 300 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 C20orf144Q9BQM9 153 aa16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 ATG101Q9BSB4 218 aa16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 GNB4Q9HAV0 340 aa16.95■□□□□ 0.3
PDLIM2-216ENST00000464275 CR1P17927 2039 aa16.94■□□□□ 0.3
PDLIM2-216ENST00000464275 H3BTX0 84 aa16.94■□□□□ 0.3
PDLIM2-216ENST00000464275 J3QLI3 93 aa16.94■□□□□ 0.3
PDLIM2-216ENST00000464275 COL8A1P27658 744 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms