RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 CHRDL1Q9BU40 450 aa15.78■□□□□ 0.12
CCM2-203ENST00000461377 CACNA1BQ00975 2339 aa15.78■□□□□ 0.12
CCM2-203ENST00000461377 FLNCQ14315 2725 aa15.78■□□□□ 0.12
CCM2-203ENST00000461377 FRMD6-AS1P0C7T7 363 aa15.78■□□□□ 0.12
CCM2-203ENST00000461377 IER3P46695 156 aa15.78■□□□□ 0.12
CCM2-203ENST00000461377 TCL1AP56279 114 aa15.78■□□□□ 0.12
CCM2-203ENST00000461377 RHOGP84095 191 aa15.78■□□□□ 0.12
CCM2-203ENST00000461377 RPL19P84098 196 aaKnown RBP15.78■□□□□ 0.12
CCM2-203ENST00000461377 C15orf32Q32M92 178 aa15.78■□□□□ 0.12
CCM2-203ENST00000461377 CMTM2Q8TAZ6 248 aa15.78■□□□□ 0.12
CCM2-203ENST00000461377 NRGNQ92686 78 aa15.78■□□□□ 0.12
CCM2-203ENST00000461377 ZNF414Q96IQ9 312 aa15.78■□□□□ 0.12
CCM2-203ENST00000461377 NIT2Q9NQR4 276 aa15.78■□□□□ 0.12
CCM2-203ENST00000461377 SPTAN1Q13813 2472 aaKnown RBP15.78■□□□□ 0.12
CCM2-203ENST00000461377 G3V318 75 aa15.77■□□□□ 0.12
CCM2-203ENST00000461377 CA1P00915 261 aaPredicted RBP15.77■□□□□ 0.12
CCM2-203ENST00000461377 PYY3Q5JQD4 70 aa15.77■□□□□ 0.12
CCM2-203ENST00000461377 PRR27Q6MZM9 219 aa15.77■□□□□ 0.12
CCM2-203ENST00000461377 GNB1LQ9BYB4 327 aa15.77■□□□□ 0.12
CCM2-203ENST00000461377 MRPL18Q9H0U6 180 aaKnown RBP15.77■□□□□ 0.12
CCM2-203ENST00000461377 IZUMO1RA6ND01 250 aa15.76■□□□□ 0.11
CCM2-203ENST00000461377 AMY1AP04745 511 aa15.76■□□□□ 0.11
CCM2-203ENST00000461377 SRSF1Q07955 248 aaKnown RBP eCLIP15.76■□□□□ 0.11
CCM2-203ENST00000461377 Q86TA4 180 aa15.76■□□□□ 0.11
CCM2-203ENST00000461377 COL12A1Q99715 3063 aa15.76■□□□□ 0.11
CCM2-203ENST00000461377 TRBV6-1A0A0K0K1D8 114 aa15.76■□□□□ 0.11
CCM2-203ENST00000461377 IGLV2-11P01706 119 aa15.76■□□□□ 0.11
CCM2-203ENST00000461377 COX19Q49B96 90 aa15.76■□□□□ 0.11
CCM2-203ENST00000461377 ZNF492Q9P255 531 aa15.76■□□□□ 0.11
CCM2-203ENST00000461377 SNURFLB1AK76 121 aa15.75■□□□□ 0.11
CCM2-203ENST00000461377 COX6B1P14854 86 aa15.75■□□□□ 0.11
CCM2-203ENST00000461377 PDE6HQ13956 83 aa15.75■□□□□ 0.11
CCM2-203ENST00000461377 WDR73Q6P4I2 378 aa15.75■□□□□ 0.11
CCM2-203ENST00000461377 GOLT1AQ6ZVE7 132 aa15.75■□□□□ 0.11
CCM2-203ENST00000461377 PACRGQ96M98 296 aaPredicted RBP15.75■□□□□ 0.11
CCM2-203ENST00000461377 AMBPP02760 352 aa15.75■□□□□ 0.11
CCM2-203ENST00000461377 GPR183P32249 361 aa15.75■□□□□ 0.11
CCM2-203ENST00000461377 CRIP2P52943 208 aaPredicted RBP15.75■□□□□ 0.11
CCM2-203ENST00000461377 C19orf54Q5BKX5 351 aa15.75■□□□□ 0.11
CCM2-203ENST00000461377 RABAC1Q9UI14 185 aa15.75■□□□□ 0.11
CCM2-203ENST00000461377 B4DSR2 109 aa15.74■□□□□ 0.11
CCM2-203ENST00000461377 SPINK4O60575 86 aa15.74■□□□□ 0.11
CCM2-203ENST00000461377 MT-ND6P03923 174 aa15.74■□□□□ 0.11
CCM2-203ENST00000461377 SLC35B1P78383 322 aa15.74■□□□□ 0.11
CCM2-203ENST00000461377 TRAV8-1A0A0A6YYK1 113 aa15.73■□□□□ 0.11
CCM2-203ENST00000461377 C19orf71A6NCJ1 209 aa15.73■□□□□ 0.11
CCM2-203ENST00000461377 SLC25A16P16260 332 aa15.73■□□□□ 0.11
CCM2-203ENST00000461377 S100A12P80511 92 aa15.73■□□□□ 0.11
CCM2-203ENST00000461377 LINC00322Q6ZN03 302 aaPredicted RBP15.73■□□□□ 0.11
CCM2-203ENST00000461377 TMEM136Q6ZRR5 245 aa15.73■□□□□ 0.11
CCM2-203ENST00000461377 CCDC140Q96MF4 163 aa15.73■□□□□ 0.11
CCM2-203ENST00000461377 TMEM75Q8N9X5 138 aa15.73■□□□□ 0.11
CCM2-203ENST00000461377 TSKUQ8WUA8 353 aa15.73■□□□□ 0.11
CCM2-203ENST00000461377 PRSS22Q9GZN4 317 aa15.73■□□□□ 0.11
CCM2-203ENST00000461377 HIF1ANQ9NWT6 349 aa15.73■□□□□ 0.11
CCM2-203ENST00000461377 SOX21Q9Y651 276 aaPredicted RBP15.73■□□□□ 0.11
CCM2-203ENST00000461377 BMPR1BO00238 502 aa15.72■□□□□ 0.11
CCM2-203ENST00000461377 CLEC3BP05452 202 aa15.72■□□□□ 0.11
CCM2-203ENST00000461377 RPL7P18124 248 aaKnown RBP15.72■□□□□ 0.11
CCM2-203ENST00000461377 MRPL54Q6P161 138 aaKnown RBP15.72■□□□□ 0.11
CCM2-203ENST00000461377 ZFAND3Q9H8U3 227 aa15.72■□□□□ 0.11
CCM2-203ENST00000461377 TRAV41A0A0B4J266 112 aa15.71■□□□□ 0.11
CCM2-203ENST00000461377 TOMM20LQ6UXN7 152 aa15.71■□□□□ 0.11
CCM2-203ENST00000461377 EEF1AKMT3Q96AZ1 226 aa15.71■□□□□ 0.11
CCM2-203ENST00000461377 RPP21Q9H633 154 aaKnown RBP15.71■□□□□ 0.11
CCM2-203ENST00000461377 NAT8BQ9UHF3 227 aa15.71■□□□□ 0.11
CCM2-203ENST00000461377 TRAV20A0A0B4J274 112 aa15.71■□□□□ 0.1
CCM2-203ENST00000461377 A6NDX4 124 aa15.71■□□□□ 0.1
CCM2-203ENST00000461377 S100A7P31151 101 aa15.71■□□□□ 0.1
CCM2-203ENST00000461377 CT83Q5H943 113 aa15.71■□□□□ 0.1
CCM2-203ENST00000461377 PRNTQ86SH4 94 aa15.71■□□□□ 0.1
CCM2-203ENST00000461377 GBGT1Q8N5D6 347 aa15.71■□□□□ 0.1
CCM2-203ENST00000461377 NUP35Q8NFH5 326 aa15.71■□□□□ 0.1
CCM2-203ENST00000461377 TRBV7-1A0A0A6YYK4 115 aa15.7■□□□□ 0.1
CCM2-203ENST00000461377 DIRC3C9JPN6 131 aa15.7■□□□□ 0.1
CCM2-203ENST00000461377 GATA3P23771 443 aa15.7■□□□□ 0.1
CCM2-203ENST00000461377 RASL11AQ6T310 242 aa15.7■□□□□ 0.1
CCM2-203ENST00000461377 WIPF2Q8TF74 440 aaPredicted RBP15.7■□□□□ 0.1
CCM2-203ENST00000461377 MS4A10Q96PG2 267 aa15.7■□□□□ 0.1
CCM2-203ENST00000461377 NEU1Q99519 415 aa15.7■□□□□ 0.1
CCM2-203ENST00000461377 A0A1B0GUS0 222 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 GRIFINA4D1Z8 144 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 K7EQM0 130 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 AAMDCQ9H7C9 122 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 A0A096LNT2 108 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 IGHV3-35A0A0C4DH35 117 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 A1L4Q6 167 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 H3BUX3 64 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 AVPP01185 164 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 P01737 135 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 HLA-DQA1P01909 254 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 CRISP2P16562 243 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 PSG9Q00887 426 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 PSG3Q16557 428 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 DNLZQ5SXM8 178 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 CLEC19AQ6UXS0 136 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 TMEM256Q8N2U0 113 aa15.69■□□□□ 0.1
CCM2-203ENST00000461377 CIARTQ8N365 385 aaPredicted RBP15.69■□□□□ 0.1
CCM2-203ENST00000461377 ZNF331Q9NQX6 463 aaPredicted RBP15.69■□□□□ 0.1
CCM2-203ENST00000461377 SMAD5-AS1Q9Y6J3 95 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms