RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 IGLV3-19P01714 112 aa16.02■□□□□ 0.15
SNX27-204ENST00000458013 ZFAND6Q6FIF0 208 aa16.02■□□□□ 0.15
SNX27-204ENST00000458013 E9PLN8 166 aa16.02■□□□□ 0.15
SNX27-204ENST00000458013 SYNJ2BPP57105 145 aa16.02■□□□□ 0.15
SNX27-204ENST00000458013 RPP25LQ8N5L8 163 aaKnown RBP16.02■□□□□ 0.15
SNX27-204ENST00000458013 GAS1P54826 345 aa16.01■□□□□ 0.15
SNX27-204ENST00000458013 COL4A6Q14031 1691 aa16.01■□□□□ 0.15
SNX27-204ENST00000458013 LCTP09848 1927 aa16.01■□□□□ 0.15
SNX27-204ENST00000458013 C3orf79P0CE67 100 aa16.01■□□□□ 0.15
SNX27-204ENST00000458013 A0A1B0GWJ7 208 aa16.01■□□□□ 0.15
SNX27-204ENST00000458013 PPBPP02775 128 aa16.01■□□□□ 0.15
SNX27-204ENST00000458013 PRR30Q53SZ7 412 aaPredicted RBP16.01■□□□□ 0.15
SNX27-204ENST00000458013 MS4A6AQ9H2W1 248 aa16.01■□□□□ 0.15
SNX27-204ENST00000458013 SSBP2P81877 361 aaPredicted RBP16■□□□□ 0.15
SNX27-204ENST00000458013 HS3ST6Q96QI5 342 aa16■□□□□ 0.15
SNX27-204ENST00000458013 SCN5AQ14524 2016 aa16■□□□□ 0.15
SNX27-204ENST00000458013 DOCK3Q8IZD9 2030 aa16■□□□□ 0.15
SNX27-204ENST00000458013 TP53BP1Q12888 1972 aaPredicted RBP16■□□□□ 0.15
SNX27-204ENST00000458013 IGHV3-38A0A0C4DH36 116 aa16■□□□□ 0.15
SNX27-204ENST00000458013 KIR3DS1Q14943 382 aa16■□□□□ 0.15
SNX27-204ENST00000458013 TMEM213A2RRL7 107 aa16■□□□□ 0.15
SNX27-204ENST00000458013 PRB1P04280 392 aa16■□□□□ 0.15
SNX27-204ENST00000458013 A0A096LPF7 62 aa16■□□□□ 0.15
SNX27-204ENST00000458013 IGKV1D-17A0A075B6S4 117 aa16■□□□□ 0.15
SNX27-204ENST00000458013 IGKV1-16P04430 117 aa15.99■□□□□ 0.15
SNX27-204ENST00000458013 IL17RELQ6ZVW7 336 aa15.99■□□□□ 0.15
SNX27-204ENST00000458013 RPL36AP83881 106 aaKnown RBP15.99■□□□□ 0.15
SNX27-204ENST00000458013 RPL36ALQ969Q0 106 aaKnown RBP15.99■□□□□ 0.15
SNX27-204ENST00000458013 PLSCR4Q9NRQ2 329 aa15.98■□□□□ 0.15
SNX27-204ENST00000458013 IGLV3-32A0A0A0MS00 114 aa15.98■□□□□ 0.15
SNX27-204ENST00000458013 EFNA4P52798 201 aa15.98■□□□□ 0.15
SNX27-204ENST00000458013 BPESC1Q9GZL8 116 aa15.98■□□□□ 0.15
SNX27-204ENST00000458013 SRRM5B3KS81 715 aa15.98■□□□□ 0.15
SNX27-204ENST00000458013 LGALS1P09382 135 aaKnown RBP15.98■□□□□ 0.15
SNX27-204ENST00000458013 NEGR1Q7Z3B1 354 aa15.98■□□□□ 0.15
SNX27-204ENST00000458013 FAM90A9PA6NNJ1 464 aa15.98■□□□□ 0.15
SNX27-204ENST00000458013 Q6P435 159 aa15.98■□□□□ 0.15
SNX27-204ENST00000458013 SIPA1L1O43166 1804 aa15.98■□□□□ 0.15
SNX27-204ENST00000458013 GAGE2BQ13066 116 aa15.97■□□□□ 0.15
SNX27-204ENST00000458013 ZNF114Q8NC26 417 aa15.97■□□□□ 0.15
SNX27-204ENST00000458013 RHPN1-AS1Q9BWJ2 59 aa15.97■□□□□ 0.15
SNX27-204ENST00000458013 LEPROTO15243 131 aa15.97■□□□□ 0.15
SNX27-204ENST00000458013 SPSB3Q6PJ21 355 aa15.97■□□□□ 0.15
SNX27-204ENST00000458013 RASL10AQ92737 203 aa15.97■□□□□ 0.15
SNX27-204ENST00000458013 TRBV7-1A0A0A6YYK4 115 aa15.97■□□□□ 0.15
SNX27-204ENST00000458013 ESDP10768 282 aa15.97■□□□□ 0.15
SNX27-204ENST00000458013 MPZP25189 248 aa15.97■□□□□ 0.15
SNX27-204ENST00000458013 XCL2Q9UBD3 114 aa15.97■□□□□ 0.15
SNX27-204ENST00000458013 CFHR2P36980 270 aa15.97■□□□□ 0.15
SNX27-204ENST00000458013 FAM166AQ6J272 317 aa15.97■□□□□ 0.15
SNX27-204ENST00000458013 GAGE12JA6NER3 117 aa15.96■□□□□ 0.15
SNX27-204ENST00000458013 OVOL3O00110 214 aa15.96■□□□□ 0.15
SNX27-204ENST00000458013 GAGE1Q13065 139 aa15.96■□□□□ 0.15
SNX27-204ENST00000458013 GAGE4Q13068 117 aa15.96■□□□□ 0.15
SNX27-204ENST00000458013 GAGE5Q13069 117 aa15.96■□□□□ 0.15
SNX27-204ENST00000458013 TRGV9Q99603 122 aa15.96■□□□□ 0.15
SNX27-204ENST00000458013 TRAV12-2A0A075B6T6 113 aa15.96■□□□□ 0.15
SNX27-204ENST00000458013 RNF223E7ERA6 249 aa15.96■□□□□ 0.15
SNX27-204ENST00000458013 TIMM21Q9BVV7 248 aa15.96■□□□□ 0.15
SNX27-204ENST00000458013 MPDZO75970 2070 aa15.96■□□□□ 0.15
SNX27-204ENST00000458013 REG4Q9BYZ8 158 aa15.96■□□□□ 0.15
SNX27-204ENST00000458013 DUX4L9Q6RFH8 374 aaPredicted RBP15.96■□□□□ 0.14
SNX27-204ENST00000458013 C9JAW5 83 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 SYS1-DBNDD2H3BUS1 97 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 TCF15Q12870 199 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 C5orf64Q2M2E5 130 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 SIGLEC9Q9Y336 463 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 NTN3O00634 580 aaPredicted RBP15.95■□□□□ 0.14
SNX27-204ENST00000458013 SAA4P35542 130 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 ANK1P16157 1881 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 VWC2LB2RUY7 222 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 DEFB131AP59861 70 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 SEC11AP67812 179 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 PFN2P35080 140 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 SPINK13Q1W4C9 94 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 SUMO4Q6EEV6 95 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 CLPSL2Q6UWE3 100 aa15.95■□□□□ 0.14
SNX27-204ENST00000458013 NMSQ5H8A3 153 aa15.94■□□□□ 0.14
SNX27-204ENST00000458013 C15orf62A8K5M9 175 aa15.94■□□□□ 0.14
SNX27-204ENST00000458013 ZNF124Q15973 351 aa15.94■□□□□ 0.14
SNX27-204ENST00000458013 SSC4DQ8WTU2 575 aa15.94■□□□□ 0.14
SNX27-204ENST00000458013 CHAC1Q9BUX1 264 aa15.94■□□□□ 0.14
SNX27-204ENST00000458013 ADAMTSL5Q6ZMM2 481 aa15.94■□□□□ 0.14
SNX27-204ENST00000458013 ARMS2P0C7Q2 107 aa15.94■□□□□ 0.14
SNX27-204ENST00000458013 IGFBPL1Q8WX77 278 aa15.94■□□□□ 0.14
SNX27-204ENST00000458013 VCYO14598 125 aa15.94■□□□□ 0.14
SNX27-204ENST00000458013 LHFPL1Q86WI0 220 aa15.94■□□□□ 0.14
SNX27-204ENST00000458013 PRIMA1Q86XR5 153 aa15.94■□□□□ 0.14
SNX27-204ENST00000458013 SPOCK3Q9BQ16 436 aa15.94■□□□□ 0.14
SNX27-204ENST00000458013 HAPLN4Q86UW8 402 aa15.93■□□□□ 0.14
SNX27-204ENST00000458013 PLEKHB2Q96CS7 222 aa15.93■□□□□ 0.14
SNX27-204ENST00000458013 F8WEM9 126 aa15.93■□□□□ 0.14
SNX27-204ENST00000458013 RNASE13Q5GAN3 156 aaKnown RBP15.93■□□□□ 0.14
SNX27-204ENST00000458013 SVILO95425 2214 aa15.93■□□□□ 0.14
SNX27-204ENST00000458013 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.93■□□□□ 0.14
SNX27-204ENST00000458013 RPRMLQ8N4K4 120 aa15.93■□□□□ 0.14
SNX27-204ENST00000458013 Q6ZRM9 215 aa15.93■□□□□ 0.14
SNX27-204ENST00000458013 ZC2HC1BQ5TFG8 222 aa15.92■□□□□ 0.14
SNX27-204ENST00000458013 ABCA7Q8IZY2 2146 aa15.92■□□□□ 0.14
SNX27-204ENST00000458013 SCN10AQ9Y5Y9 1956 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms