RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 ASH1LQ9NR48 2969 aaKnown RBP13.09□□□□□ -0.31
CCDC43-202ENST00000457422 F2Z2F3 143 aa13.08□□□□□ -0.32
CCDC43-202ENST00000457422 IGLV2-11P01706 119 aa13.08□□□□□ -0.32
CCDC43-202ENST00000457422 FCGR2BP31994 310 aaPredicted RBP13.08□□□□□ -0.32
CCDC43-202ENST00000457422 BRS3P32247 399 aa13.08□□□□□ -0.32
CCDC43-202ENST00000457422 KLK9Q2XQG4 91 aa13.08□□□□□ -0.32
CCDC43-202ENST00000457422 SIGLEC15Q6ZMC9 328 aa13.08□□□□□ -0.32
CCDC43-202ENST00000457422 LINC00322Q6ZN03 302 aaPredicted RBP13.08□□□□□ -0.32
CCDC43-202ENST00000457422 MS4A10Q96PG2 267 aa13.08□□□□□ -0.32
CCDC43-202ENST00000457422 KLK9Q9UKQ9 250 aa13.08□□□□□ -0.32
CCDC43-202ENST00000457422 POLR3KQ9Y2Y1 108 aaPredicted RBP13.08□□□□□ -0.32
CCDC43-202ENST00000457422 AKAP6Q13023 2319 aa13.08□□□□□ -0.32
CCDC43-202ENST00000457422 HIGD1CA8MV81 97 aa13.08□□□□□ -0.32
CCDC43-202ENST00000457422 NDUFB8O95169 186 aa13.08□□□□□ -0.32
CCDC43-202ENST00000457422 IGHV4-39P01824 125 aa13.08□□□□□ -0.32
CCDC43-202ENST00000457422 Q56UQ5 140 aa13.08□□□□□ -0.32
CCDC43-202ENST00000457422 CACNA1AO00555 2505 aa13.07□□□□□ -0.32
CCDC43-202ENST00000457422 IGHV3-23P01764 117 aa13.07□□□□□ -0.32
CCDC43-202ENST00000457422 APCSP02743 223 aa13.07□□□□□ -0.32
CCDC43-202ENST00000457422 SAA4P35542 130 aa13.07□□□□□ -0.32
CCDC43-202ENST00000457422 PDE6HQ13956 83 aa13.07□□□□□ -0.32
CCDC43-202ENST00000457422 KIAA1644Q3SXP7 199 aa13.07□□□□□ -0.32
CCDC43-202ENST00000457422 BCL6BQ8N143 479 aaPredicted RBP13.07□□□□□ -0.32
CCDC43-202ENST00000457422 TMEM75Q8N9X5 138 aa13.07□□□□□ -0.32
CCDC43-202ENST00000457422 TXN2Q99757 166 aa13.07□□□□□ -0.32
CCDC43-202ENST00000457422 PIEZO1Q92508 2521 aa13.07□□□□□ -0.32
CCDC43-202ENST00000457422 A0A1B0GXF2 115 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 A8MWL6 223 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 NPIPB6E9PJ23 425 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 SCGB2A1O75556 95 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 OR2J3O76001 311 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 GOLT1AQ6ZVE7 132 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 ZNF414Q96IQ9 312 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 C17orf77Q96MU5 243 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 GFRA4Q9GZZ7 299 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 TRAV8-1A0A0A6YYK1 113 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 GOSR1O95249 250 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 P01737 135 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 SRIP30626 198 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 SLAQ13239 276 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 ZNF664Q8N3J9 261 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 HSPB9Q9BQS6 159 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 PRO1933Q9H354 126 aa13.06□□□□□ -0.32
CCDC43-202ENST00000457422 FAM231BA6NCW3 169 aa13.05□□□□□ -0.32
CCDC43-202ENST00000457422 VWC2LB2RUY7 222 aa13.05□□□□□ -0.32
CCDC43-202ENST00000457422 DDTP30046 118 aa13.05□□□□□ -0.32
CCDC43-202ENST00000457422 FAM110DQ8TAY7 271 aaPredicted RBP13.05□□□□□ -0.32
CCDC43-202ENST00000457422 VN1R17PQ8TDU5 208 aa13.05□□□□□ -0.32
CCDC43-202ENST00000457422 SOX21Q9Y651 276 aaPredicted RBP13.05□□□□□ -0.32
CCDC43-202ENST00000457422 CSMD1Q96PZ7 3565 aa13.05□□□□□ -0.32
CCDC43-202ENST00000457422 DEFA6Q01524 100 aa13.04□□□□□ -0.32
CCDC43-202ENST00000457422 GDF5OSQ5U4N7 250 aa13.04□□□□□ -0.32
CCDC43-202ENST00000457422 C16orf54Q6UWD8 224 aa13.04□□□□□ -0.32
CCDC43-202ENST00000457422 OR4B1Q8NGF8 309 aa13.04□□□□□ -0.32
CCDC43-202ENST00000457422 DAZAP1Q96EP5 407 aaKnown RBP13.04□□□□□ -0.32
CCDC43-202ENST00000457422 NOL4LQ96MY1 436 aaPredicted RBP13.04□□□□□ -0.32
CCDC43-202ENST00000457422 TMEM8BA6NDV4 472 aa13.04□□□□□ -0.32
CCDC43-202ENST00000457422 NPFFO15130 113 aa13.04□□□□□ -0.32
CCDC43-202ENST00000457422 FAM209BQ5JX69 171 aa13.04□□□□□ -0.32
CCDC43-202ENST00000457422 Q6ZWC4 215 aa13.04□□□□□ -0.32
CCDC43-202ENST00000457422 Q71RC1 249 aaPredicted RBP13.04□□□□□ -0.32
CCDC43-202ENST00000457422 NAGKQ9UJ70 344 aa13.04□□□□□ -0.32
CCDC43-202ENST00000457422 FBXL7Q9UJT9 491 aa13.04□□□□□ -0.32
CCDC43-202ENST00000457422 ZFP30Q9Y2G7 519 aa13.04□□□□□ -0.32
CCDC43-202ENST00000457422 OR2T8A6NH00 312 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 K7EQM0 130 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 ZNF253O75346 499 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 SCGB1D1O95968 90 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 CTSGP08311 255 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 PRNTQ86SH4 94 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 KCNS1Q96KK3 526 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 CENPVL3A0A0U1RRI6 287 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 GPX1P07203 203 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 TCF24Q7RTU0 167 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 CIARTQ8N365 385 aaPredicted RBP13.03□□□□□ -0.32
CCDC43-202ENST00000457422 GTSF1Q8WW33 167 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 SAMD10Q9BYL1 202 aa13.03□□□□□ -0.32
CCDC43-202ENST00000457422 HBBP68871 147 aa13.02□□□□□ -0.33
CCDC43-202ENST00000457422 PSG3Q16557 428 aa13.02□□□□□ -0.33
CCDC43-202ENST00000457422 ECSCRQ19T08 205 aa13.02□□□□□ -0.33
CCDC43-202ENST00000457422 RCHY1Q96PM5 261 aa13.02□□□□□ -0.33
CCDC43-202ENST00000457422 CFAP46Q8IYW2 2715 aa13.02□□□□□ -0.33
CCDC43-202ENST00000457422 A8MWP6 167 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 DIRC3C9JPN6 131 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 PRB4P10163 310 aaPredicted RBP13.01□□□□□ -0.33
CCDC43-202ENST00000457422 COL8A1P27658 744 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 PAX8Q06710 450 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 KLF5Q13887 457 aaPredicted RBP13.01□□□□□ -0.33
CCDC43-202ENST00000457422 ARL6IP6Q8N6S5 226 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 C18orf32Q8TCD1 76 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 SERTM2A0A1B0GWG4 89 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 ATP6V0E1O15342 81 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 RPL7P18124 248 aaKnown RBP13.01□□□□□ -0.33
CCDC43-202ENST00000457422 UNQ5815/PRO19632Q6UWF5 114 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 RBPMS2Q6ZRY4 209 aaKnown RBP13.01□□□□□ -0.33
CCDC43-202ENST00000457422 REC114Q7Z4M0 266 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 C14orf144Q96I85 54 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 TMUB1Q9BVT8 246 aa13.01□□□□□ -0.33
CCDC43-202ENST00000457422 AAMDCQ9H7C9 122 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms