RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 IGKV1-5P01602 117 aa10.31□□□□□ -0.76
SF3B4-202ENST00000457312 HSMCR30P0CW71 290 aa10.31□□□□□ -0.76
SF3B4-202ENST00000457312 PSMA1P25786 263 aaKnown RBP10.31□□□□□ -0.76
SF3B4-202ENST00000457312 AHSA2Q719I0 299 aa10.31□□□□□ -0.76
SF3B4-202ENST00000457312 Q8N976 141 aa10.31□□□□□ -0.76
SF3B4-202ENST00000457312 TMEM170AQ8WVE7 144 aa10.31□□□□□ -0.76
SF3B4-202ENST00000457312 PDCD10Q9BUL8 212 aa10.31□□□□□ -0.76
SF3B4-202ENST00000457312 MRPL32Q9BYC8 188 aaKnown RBP10.31□□□□□ -0.76
SF3B4-202ENST00000457312 RNF222A6NCQ9 220 aa10.3□□□□□ -0.76
SF3B4-202ENST00000457312 ZNF90Q03938 601 aa10.3□□□□□ -0.76
SF3B4-202ENST00000457312 ZNF846Q147U1 533 aa10.3□□□□□ -0.76
SF3B4-202ENST00000457312 PHLDA2Q53GA4 152 aa10.3□□□□□ -0.76
SF3B4-202ENST00000457312 PCNPQ8WW12 178 aaKnown RBP10.3□□□□□ -0.76
SF3B4-202ENST00000457312 LSM2Q9Y333 95 aaKnown RBP10.3□□□□□ -0.76
SF3B4-202ENST00000457312 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.3□□□□□ -0.76
SF3B4-202ENST00000457312 C2orf83Q53S99 150 aa10.29□□□□□ -0.76
SF3B4-202ENST00000457312 C1orf146Q5VVC0 180 aa10.29□□□□□ -0.76
SF3B4-202ENST00000457312 ETFRF1Q6IPR1 90 aa10.29□□□□□ -0.76
SF3B4-202ENST00000457312 OR5AP2Q8NGF4 316 aa10.29□□□□□ -0.76
SF3B4-202ENST00000457312 TXNDC17Q9BRA2 123 aa10.29□□□□□ -0.76
SF3B4-202ENST00000457312 SLC25A22Q9H936 323 aa10.29□□□□□ -0.76
SF3B4-202ENST00000457312 RRP15Q9Y3B9 282 aaKnown RBP10.29□□□□□ -0.76
SF3B4-202ENST00000457312 IGKV1D-37A0A075B6S9 117 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 TIRAPP58753 221 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 TAS2R20P59543 309 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 WDR73Q6P4I2 378 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 TBC1D26Q86UD7 250 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 ZNF680Q8NEM1 530 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 PYDC1Q8WXC3 89 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 UFD1Q92890 307 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 PYGO2Q9BRQ0 406 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 ZNF2Q9BSG1 426 aaPredicted RBP10.28□□□□□ -0.76
SF3B4-202ENST00000457312 MND1Q9BWT6 205 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 EHFQ9NZC4 300 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 PSORS1C1Q9UIG5 152 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 KLF12Q9Y4X4 402 aa10.28□□□□□ -0.76
SF3B4-202ENST00000457312 KRTAP9-7A8MTY7 169 aa10.27□□□□□ -0.77
SF3B4-202ENST00000457312 MRPL16Q9NX20 251 aaKnown RBP10.27□□□□□ -0.77
SF3B4-202ENST00000457312 ORM1P02763 201 aa10.26□□□□□ -0.77
SF3B4-202ENST00000457312 FABP5Q01469 135 aa10.26□□□□□ -0.77
SF3B4-202ENST00000457312 FGL1Q08830 312 aa10.26□□□□□ -0.77
SF3B4-202ENST00000457312 SPHARQ15513 63 aa10.26□□□□□ -0.77
SF3B4-202ENST00000457312 FFAR4Q5NUL3 377 aa10.26□□□□□ -0.77
SF3B4-202ENST00000457312 DHRS11Q6UWP2 260 aa10.26□□□□□ -0.77
SF3B4-202ENST00000457312 ZNF555Q8NEP9 628 aa10.26□□□□□ -0.77
SF3B4-202ENST00000457312 OR1B1Q8NGR6 318 aa10.26□□□□□ -0.77
SF3B4-202ENST00000457312 CXCL3P19876 107 aa10.25□□□□□ -0.77
SF3B4-202ENST00000457312 PPT1P50897 306 aa10.25□□□□□ -0.77
SF3B4-202ENST00000457312 TCL1AP56279 114 aa10.25□□□□□ -0.77
SF3B4-202ENST00000457312 LAIR2Q6ISS4 152 aa10.25□□□□□ -0.77
SF3B4-202ENST00000457312 Q8N3U1 123 aa10.25□□□□□ -0.77
SF3B4-202ENST00000457312 ATP6V0E2Q8NHE4 81 aa10.25□□□□□ -0.77
SF3B4-202ENST00000457312 SLC25A31Q9H0C2 315 aa10.25□□□□□ -0.77
SF3B4-202ENST00000457312 TRAV12-3A0A0B4J271 114 aa10.24□□□□□ -0.77
SF3B4-202ENST00000457312 TRGV4A0A0C4DH28 118 aa10.24□□□□□ -0.77
SF3B4-202ENST00000457312 ZFP92A6NM28 416 aa10.24□□□□□ -0.77
SF3B4-202ENST00000457312 PDCD5O14737 125 aa10.24□□□□□ -0.77
SF3B4-202ENST00000457312 SCGNO76038 276 aa10.24□□□□□ -0.77
SF3B4-202ENST00000457312 AKR1C2P52895 323 aa10.24□□□□□ -0.77
SF3B4-202ENST00000457312 CCDC190Q86UF4 302 aa10.24□□□□□ -0.77
SF3B4-202ENST00000457312 C9orf16Q9BUW7 83 aa10.24□□□□□ -0.77
SF3B4-202ENST00000457312 FKBP14Q9NWM8 211 aa10.24□□□□□ -0.77
SF3B4-202ENST00000457312 TRAV8-3A0A0A6YYJ7 113 aa10.23□□□□□ -0.77
SF3B4-202ENST00000457312 TRAV8-6A0A0B4J262 113 aa10.23□□□□□ -0.77
SF3B4-202ENST00000457312 J3KRW8 73 aa10.23□□□□□ -0.77
SF3B4-202ENST00000457312 RFX2P48378 723 aa10.23□□□□□ -0.77
SF3B4-202ENST00000457312 TRAM1Q15629 374 aa10.23□□□□□ -0.77
SF3B4-202ENST00000457312 OR4D5Q8NGN0 318 aa10.23□□□□□ -0.77
SF3B4-202ENST00000457312 A0A0G2JRQ6 117 aa10.22□□□□□ -0.77
SF3B4-202ENST00000457312 LOC100131303A0A0U1RQF7 123 aa10.22□□□□□ -0.77
SF3B4-202ENST00000457312 SNRPGP15A8MWD9 76 aa10.22□□□□□ -0.77
SF3B4-202ENST00000457312 SFTA3P0C7M3 94 aa10.22□□□□□ -0.77
SF3B4-202ENST00000457312 GNGT1P63211 74 aa10.22□□□□□ -0.77
SF3B4-202ENST00000457312 KLF9Q13886 244 aaPredicted RBP10.22□□□□□ -0.77
SF3B4-202ENST00000457312 OR10J3Q5JRS4 329 aa10.22□□□□□ -0.77
SF3B4-202ENST00000457312 RPUSD4Q96CM3 377 aaKnown RBP10.22□□□□□ -0.77
SF3B4-202ENST00000457312 GPR82Q96P67 336 aa10.22□□□□□ -0.77
SF3B4-202ENST00000457312 HEYLQ9NQ87 328 aaPredicted RBP10.22□□□□□ -0.77
SF3B4-202ENST00000457312 HRH1P35367 487 aa10.21□□□□□ -0.77
SF3B4-202ENST00000457312 SPCS3P61009 180 aa10.21□□□□□ -0.77
SF3B4-202ENST00000457312 IQCF2Q8IXL9 164 aa10.21□□□□□ -0.77
SF3B4-202ENST00000457312 BOLA1Q9Y3E2 137 aa10.21□□□□□ -0.77
SF3B4-202ENST00000457312 TRAV1-2A0A0B4J238 106 aa10.2□□□□□ -0.78
SF3B4-202ENST00000457312 MEIS3P1A6NDR6 274 aa10.2□□□□□ -0.78
SF3B4-202ENST00000457312 S100GP29377 79 aa10.2□□□□□ -0.78
SF3B4-202ENST00000457312 AARDQ4LEZ3 155 aa10.2□□□□□ -0.78
SF3B4-202ENST00000457312 TEPPQ6URK8 271 aa10.2□□□□□ -0.78
SF3B4-202ENST00000457312 ZNF479Q96JC4 524 aa10.2□□□□□ -0.78
SF3B4-202ENST00000457312 MED4Q9NPJ6 270 aa10.2□□□□□ -0.78
SF3B4-202ENST00000457312 COX11Q9Y6N1 276 aa10.2□□□□□ -0.78
SF3B4-202ENST00000457312 KIF25-AS1Q9Y6Z4 181 aa10.2□□□□□ -0.78
SF3B4-202ENST00000457312 TMEM56-RWDD3S4R434 201 aa10.2□□□□□ -0.78
SF3B4-202ENST00000457312 LINC00854A0A1B0GVQ3 168 aa10.19□□□□□ -0.78
SF3B4-202ENST00000457312 RAB3BP20337 219 aa10.19□□□□□ -0.78
SF3B4-202ENST00000457312 ANXA2RQ3ZCQ2 193 aa10.19□□□□□ -0.78
SF3B4-202ENST00000457312 NMSQ5H8A3 153 aa10.19□□□□□ -0.78
SF3B4-202ENST00000457312 SH2D6Q7Z4S9 175 aa10.19□□□□□ -0.78
SF3B4-202ENST00000457312 SLC45A2Q9UMX9 530 aa10.19□□□□□ -0.78
SF3B4-202ENST00000457312 TRAV18A0A075B6X5 111 aa10.18□□□□□ -0.78
SF3B4-202ENST00000457312 SMIM30A4D0T7 59 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms