RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 A0A1W2PRD5 423 aa10.94□□□□□ -0.66
TOP3B-213ENST00000457179 A0A1W2PRF3 423 aa10.94□□□□□ -0.66
TOP3B-213ENST00000457179 A0A1W2PRM7 423 aa10.94□□□□□ -0.66
TOP3B-213ENST00000457179 HLA-DRB1P01911 266 aa10.94□□□□□ -0.66
TOP3B-213ENST00000457179 PPIAL4FP0DN26 164 aa10.94□□□□□ -0.66
TOP3B-213ENST00000457179 KIR3DS1Q14943 382 aa10.94□□□□□ -0.66
TOP3B-213ENST00000457179 GAFA1Q96PS6 74 aa10.94□□□□□ -0.66
TOP3B-213ENST00000457179 LSM4Q9Y4Z0 139 aaKnown RBP10.94□□□□□ -0.66
TOP3B-213ENST00000457179 A0A1B0GV72 72 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 CRXO43186 299 aaPredicted RBP10.93□□□□□ -0.66
TOP3B-213ENST00000457179 C17orf58Q2M2W7 97 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 FAM169BQ8N8A8 192 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 ZNF503Q96F45 646 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 VKORC1Q9BQB6 163 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 NPFFR1Q9GZQ6 430 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 VWC2LB2RUY7 222 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 IGKV1-16P04430 117 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 APOBEC3AP31941 199 aaPredicted RBP10.93□□□□□ -0.66
TOP3B-213ENST00000457179 SEC11AP67812 179 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 DIAPH2-AS1Q14236 149 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 NEGR1Q7Z3B1 354 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 PRSS46E5RG02 174 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 NDUFS8O00217 210 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 LHBP01229 141 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 IGHV3-48P01763 117 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 MLANAQ16655 118 aa10.93□□□□□ -0.66
TOP3B-213ENST00000457179 TRAV5A0A0B4J249 113 aa10.92□□□□□ -0.66
TOP3B-213ENST00000457179 KBTBD11-OT1A0A1B0GTJ5 212 aa10.92□□□□□ -0.66
TOP3B-213ENST00000457179 A6NDN8 102 aa10.92□□□□□ -0.66
TOP3B-213ENST00000457179 KLRB1Q12918 225 aa10.92□□□□□ -0.66
TOP3B-213ENST00000457179 PRSS57Q6UWY2 283 aa10.92□□□□□ -0.66
TOP3B-213ENST00000457179 WIPF2Q8TF74 440 aaPredicted RBP10.92□□□□□ -0.66
TOP3B-213ENST00000457179 SIGMAR1Q99720 223 aa10.92□□□□□ -0.66
TOP3B-213ENST00000457179 RABAC1Q9UI14 185 aa10.92□□□□□ -0.66
TOP3B-213ENST00000457179 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.92□□□□□ -0.66
TOP3B-213ENST00000457179 C22orf46C9J442 243 aa10.92□□□□□ -0.66
TOP3B-213ENST00000457179 COX8AP10176 69 aa10.92□□□□□ -0.66
TOP3B-213ENST00000457179 VDAC2P45880 294 aaPredicted RBP10.92□□□□□ -0.66
TOP3B-213ENST00000457179 UBE2L3P68036 154 aaKnown RBP10.92□□□□□ -0.66
TOP3B-213ENST00000457179 ZNF788Q6ZQV5 615 aa10.92□□□□□ -0.66
TOP3B-213ENST00000457179 ENY2Q9NPA8 101 aa10.92□□□□□ -0.66
TOP3B-213ENST00000457179 SETD2Q9BYW2 2564 aaPredicted RBP10.91□□□□□ -0.66
TOP3B-213ENST00000457179 USP24Q9UPU5 2620 aa10.91□□□□□ -0.66
TOP3B-213ENST00000457179 SHISA9B4DS77 424 aa10.91□□□□□ -0.66
TOP3B-213ENST00000457179 ENSAO43768 121 aaKnown RBP10.91□□□□□ -0.66
TOP3B-213ENST00000457179 GRAMD2BQ96HH9 432 aa10.91□□□□□ -0.66
TOP3B-213ENST00000457179 PGLYRP4Q96LB8 373 aa10.91□□□□□ -0.66
TOP3B-213ENST00000457179 TANC2Q9HCD6 1990 aa10.91□□□□□ -0.66
TOP3B-213ENST00000457179 OR2J3O76001 311 aa10.91□□□□□ -0.66
TOP3B-213ENST00000457179 CEACAM3P40198 252 aa10.91□□□□□ -0.66
TOP3B-213ENST00000457179 RAB9AP51151 201 aa10.91□□□□□ -0.66
TOP3B-213ENST00000457179 SCGB2A2Q13296 93 aa10.91□□□□□ -0.66
TOP3B-213ENST00000457179 OR10X1Q8NGY0 326 aa10.91□□□□□ -0.66
TOP3B-213ENST00000457179 ATP6V0BQ99437 205 aa10.91□□□□□ -0.66
TOP3B-213ENST00000457179 TSSC4Q9Y5U2 329 aaPredicted RBP10.91□□□□□ -0.66
TOP3B-213ENST00000457179 MBD6Q96DN6 1003 aa10.9□□□□□ -0.66
TOP3B-213ENST00000457179 IDI2-AS1Q9NZ38 188 aa10.9□□□□□ -0.66
TOP3B-213ENST00000457179 H3BRM9 83 aa10.9□□□□□ -0.66
TOP3B-213ENST00000457179 NDUFB3O43676 98 aa10.9□□□□□ -0.66
TOP3B-213ENST00000457179 COX7A1P24310 79 aa10.9□□□□□ -0.66
TOP3B-213ENST00000457179 GNG5P63218 68 aa10.9□□□□□ -0.66
TOP3B-213ENST00000457179 HBBP68871 147 aa10.9□□□□□ -0.66
TOP3B-213ENST00000457179 MS4A6AQ9H2W1 248 aa10.9□□□□□ -0.66
TOP3B-213ENST00000457179 AMMECR1Q9Y4X0 333 aaPredicted RBP10.9□□□□□ -0.66
TOP3B-213ENST00000457179 hADV38S2A0JD32 116 aa10.9□□□□□ -0.67
TOP3B-213ENST00000457179 NCR2O95944 276 aa10.9□□□□□ -0.67
TOP3B-213ENST00000457179 LIPFP07098 398 aa10.9□□□□□ -0.67
TOP3B-213ENST00000457179 HSD52Q0P140 79 aa10.9□□□□□ -0.67
TOP3B-213ENST00000457179 RTL8BQ17RB0 113 aa10.9□□□□□ -0.67
TOP3B-213ENST00000457179 MORN5Q5VZ52 161 aa10.9□□□□□ -0.67
TOP3B-213ENST00000457179 RASL11AQ6T310 242 aa10.9□□□□□ -0.67
TOP3B-213ENST00000457179 OR10W1Q8NGF6 305 aa10.9□□□□□ -0.67
TOP3B-213ENST00000457179 VSTM2AQ8TAG5 236 aa10.9□□□□□ -0.67
TOP3B-213ENST00000457179 TMUB1Q9BVT8 246 aa10.9□□□□□ -0.67
TOP3B-213ENST00000457179 F11RQ9Y624 299 aaKnown RBP10.9□□□□□ -0.67
TOP3B-213ENST00000457179 CREBBPQ92793 2442 aa10.9□□□□□ -0.67
TOP3B-213ENST00000457179 PYYP10082 97 aa10.89□□□□□ -0.67
TOP3B-213ENST00000457179 PRR20EP86478 221 aa10.89□□□□□ -0.67
TOP3B-213ENST00000457179 PRR20CP86479 221 aa10.89□□□□□ -0.67
TOP3B-213ENST00000457179 PRR20DP86480 221 aa10.89□□□□□ -0.67
TOP3B-213ENST00000457179 PRR20BP86481 221 aa10.89□□□□□ -0.67
TOP3B-213ENST00000457179 PRR20AP86496 221 aa10.89□□□□□ -0.67
TOP3B-213ENST00000457179 PET117Q6UWS5 81 aa10.89□□□□□ -0.67
TOP3B-213ENST00000457179 SRRM4A7MD48 611 aaKnown RBP10.89□□□□□ -0.67
TOP3B-213ENST00000457179 TMEM178BH3BS89 294 aa10.89□□□□□ -0.67
TOP3B-213ENST00000457179 F2RL2O00254 374 aa10.89□□□□□ -0.67
TOP3B-213ENST00000457179 TMEM200BQ69YZ2 307 aa10.89□□□□□ -0.67
TOP3B-213ENST00000457179 NUP37Q8NFH4 326 aa10.89□□□□□ -0.67
TOP3B-213ENST00000457179 CTSZQ9UBR2 303 aa10.89□□□□□ -0.67
TOP3B-213ENST00000457179 TRAV26-1A0A087WT03 109 aa10.88□□□□□ -0.67
TOP3B-213ENST00000457179 A0A1W2PPM0 123 aa10.88□□□□□ -0.67
TOP3B-213ENST00000457179 NDUFS7O75251 213 aa10.88□□□□□ -0.67
TOP3B-213ENST00000457179 UCNP55089 124 aa10.88□□□□□ -0.67
TOP3B-213ENST00000457179 OR8A1Q8NGG7 326 aa10.88□□□□□ -0.67
TOP3B-213ENST00000457179 CHCHD1Q96BP2 118 aaKnown RBP10.88□□□□□ -0.67
TOP3B-213ENST00000457179 C15orf61A6NNL5 157 aa10.88□□□□□ -0.67
TOP3B-213ENST00000457179 CHEK1O14757 476 aa10.88□□□□□ -0.67
TOP3B-213ENST00000457179 FCN3O75636 299 aa10.88□□□□□ -0.67
TOP3B-213ENST00000457179 OR5AL1P0C617 328 aa10.88□□□□□ -0.67
TOP3B-213ENST00000457179 TAS2R45P59539 299 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms