RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 SPINK13Q1W4C9 94 aa11.32□□□□□ -0.6
GPC1-206ENST00000455111 SPATA31B1PQ5VZV4 182 aa11.32□□□□□ -0.6
GPC1-206ENST00000455111 TMEM88Q6PEY1 159 aa11.32□□□□□ -0.6
GPC1-206ENST00000455111 OR4D5Q8NGN0 318 aa11.32□□□□□ -0.6
GPC1-206ENST00000455111 PPP1R14BQ96C90 147 aa11.32□□□□□ -0.6
GPC1-206ENST00000455111 SDHCQ99643 169 aaPredicted RBP11.32□□□□□ -0.6
GPC1-206ENST00000455111 SLC25A21Q9BQT8 299 aaPredicted RBP11.32□□□□□ -0.6
GPC1-206ENST00000455111 SRRQ9GZT4 340 aa11.32□□□□□ -0.6
GPC1-206ENST00000455111 RPRMQ9NS64 109 aa11.32□□□□□ -0.6
GPC1-206ENST00000455111 C9orf170A2RU37 121 aa11.31□□□□□ -0.6
GPC1-206ENST00000455111 ZNF705GA8MUZ8 300 aaPredicted RBP11.31□□□□□ -0.6
GPC1-206ENST00000455111 MRPS12O15235 138 aaKnown RBP11.31□□□□□ -0.6
GPC1-206ENST00000455111 HTN3P15516 51 aa11.31□□□□□ -0.6
GPC1-206ENST00000455111 BTCP35070 178 aa11.31□□□□□ -0.6
GPC1-206ENST00000455111 FAUP35544 74 aaKnown RBP11.31□□□□□ -0.6
GPC1-206ENST00000455111 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
GPC1-206ENST00000455111 PATE2Q6UY27 113 aa11.31□□□□□ -0.6
GPC1-206ENST00000455111 CENPSQ8N2Z9 138 aa11.31□□□□□ -0.6
GPC1-206ENST00000455111 OR1B1Q8NGR6 318 aa11.31□□□□□ -0.6
GPC1-206ENST00000455111 IGF2BP2-AS1Q96M15 143 aa11.31□□□□□ -0.6
GPC1-206ENST00000455111 SLC25A39Q9BZJ4 359 aaPredicted RBP11.31□□□□□ -0.6
GPC1-206ENST00000455111 GOLT1BQ9Y3E0 138 aa11.31□□□□□ -0.6
GPC1-206ENST00000455111 MED6O75586 246 aa11.3□□□□□ -0.6
GPC1-206ENST00000455111 HBE1P02100 147 aa11.3□□□□□ -0.6
GPC1-206ENST00000455111 FABP1P07148 127 aa11.3□□□□□ -0.6
GPC1-206ENST00000455111 GALR1P47211 349 aa11.3□□□□□ -0.6
GPC1-206ENST00000455111 CYP2G1PQ6ZSU1 146 aa11.3□□□□□ -0.6
GPC1-206ENST00000455111 TMEM144Q7Z5S9 345 aa11.3□□□□□ -0.6
GPC1-206ENST00000455111 BAP18Q8IXM2 172 aa11.3□□□□□ -0.6
GPC1-206ENST00000455111 UHRF2Q96PU4 802 aa11.3□□□□□ -0.6
GPC1-206ENST00000455111 CIB3Q96Q77 187 aaPredicted RBP11.3□□□□□ -0.6
GPC1-206ENST00000455111 SHANK2-AS3Q9BTD1 123 aa11.3□□□□□ -0.6
GPC1-206ENST00000455111 PFDN2Q9UHV9 154 aa11.3□□□□□ -0.6
GPC1-206ENST00000455111 TRAV12-2A0A075B6T6 113 aa11.29□□□□□ -0.6
GPC1-206ENST00000455111 MEOX2P50222 304 aa11.29□□□□□ -0.6
GPC1-206ENST00000455111 PLP1P60201 277 aa11.29□□□□□ -0.6
GPC1-206ENST00000455111 ARL16Q0P5N6 197 aa11.29□□□□□ -0.6
GPC1-206ENST00000455111 FCN2Q15485 313 aa11.29□□□□□ -0.6
GPC1-206ENST00000455111 RRN3P1Q2M238 152 aa11.29□□□□□ -0.6
GPC1-206ENST00000455111 BPIFCQ8NFQ6 507 aa11.29□□□□□ -0.6
GPC1-206ENST00000455111 FAM210BQ96KR6 192 aa11.29□□□□□ -0.6
GPC1-206ENST00000455111 C7orf50Q9BRJ6 194 aaKnown RBP11.29□□□□□ -0.6
GPC1-206ENST00000455111 KRTAP4-5Q9BYR2 181 aa11.29□□□□□ -0.6
GPC1-206ENST00000455111 APOBP04114 4563 aaKnown RBP11.29□□□□□ -0.6
GPC1-206ENST00000455111 CFDP00746 253 aaPredicted RBP11.28□□□□□ -0.6
GPC1-206ENST00000455111 AP3S2P59780 193 aa11.28□□□□□ -0.6
GPC1-206ENST00000455111 AKR1C1Q04828 323 aa11.28□□□□□ -0.6
GPC1-206ENST00000455111 TMEM14EPQ6UXP3 125 aa11.28□□□□□ -0.6
GPC1-206ENST00000455111 STRAPQ9Y3F4 350 aaKnown RBP11.28□□□□□ -0.6
GPC1-206ENST00000455111 NDUFB6O95139 128 aa11.27□□□□□ -0.61
GPC1-206ENST00000455111 CXCL3P19876 107 aa11.27□□□□□ -0.61
GPC1-206ENST00000455111 UBE2MP61081 183 aaKnown RBP11.27□□□□□ -0.61
GPC1-206ENST00000455111 KIR3DS1Q14943 382 aa11.27□□□□□ -0.61
GPC1-206ENST00000455111 ZNF575Q86XF7 245 aa11.27□□□□□ -0.61
GPC1-206ENST00000455111 DEDD2Q8WXF8 326 aa11.27□□□□□ -0.61
GPC1-206ENST00000455111 TMEM147Q9BVK8 224 aa11.27□□□□□ -0.61
GPC1-206ENST00000455111 PSENENQ9NZ42 101 aa11.27□□□□□ -0.61
GPC1-206ENST00000455111 DNAH5Q8TE73 4624 aa11.27□□□□□ -0.61
GPC1-206ENST00000455111 A0A087X0K7 114 aa11.26□□□□□ -0.61
GPC1-206ENST00000455111 SSSCA1O60232 199 aa11.26□□□□□ -0.61
GPC1-206ENST00000455111 NOL3O60936 208 aaKnown RBP11.26□□□□□ -0.61
GPC1-206ENST00000455111 LINC00869P0C866 280 aa11.26□□□□□ -0.61
GPC1-206ENST00000455111 DAD1P61803 113 aa11.26□□□□□ -0.61
GPC1-206ENST00000455111 RRAS2P62070 204 aaPredicted RBP11.26□□□□□ -0.61
GPC1-206ENST00000455111 FGL1Q08830 312 aa11.26□□□□□ -0.61
GPC1-206ENST00000455111 RNF212Q495C1 297 aa11.26□□□□□ -0.61
GPC1-206ENST00000455111 MORN5Q5VZ52 161 aa11.26□□□□□ -0.61
GPC1-206ENST00000455111 ZBTB8BQ8NAP8 495 aaPredicted RBP11.26□□□□□ -0.61
GPC1-206ENST00000455111 SMIM8Q96KF7 97 aa11.26□□□□□ -0.61
GPC1-206ENST00000455111 RCL1Q9Y2P8 373 aaKnown RBP11.26□□□□□ -0.61
GPC1-206ENST00000455111 TEX48A0A1B0GUV7 120 aa11.25□□□□□ -0.61
GPC1-206ENST00000455111 IL5P05113 134 aa11.25□□□□□ -0.61
GPC1-206ENST00000455111 SNRPCP09234 159 aaKnown RBP11.25□□□□□ -0.61
GPC1-206ENST00000455111 OR4E1P0C645 316 aa11.25□□□□□ -0.61
GPC1-206ENST00000455111 METTL15P1P0C7V9 234 aa11.25□□□□□ -0.61
GPC1-206ENST00000455111 MED14OSP0DP75 135 aa11.25□□□□□ -0.61
GPC1-206ENST00000455111 ANXA7P20073 488 aaKnown RBP11.25□□□□□ -0.61
GPC1-206ENST00000455111 RPP30P78346 268 aaKnown RBP11.25□□□□□ -0.61
GPC1-206ENST00000455111 SLC38A11Q08AI6 406 aa11.25□□□□□ -0.61
GPC1-206ENST00000455111 SAMD13Q5VXD3 122 aa11.25□□□□□ -0.61
GPC1-206ENST00000455111 UBE2DNLQ8IWF7 75 aa11.25□□□□□ -0.61
GPC1-206ENST00000455111 GPR82Q96P67 336 aa11.25□□□□□ -0.61
GPC1-206ENST00000455111 PARD6GQ9BYG4 376 aaPredicted RBP11.25□□□□□ -0.61
GPC1-206ENST00000455111 HIGD1AQ9Y241 93 aa11.25□□□□□ -0.61
GPC1-206ENST00000455111 MUC4Q99102 2169 aa11.24□□□□□ -0.61
GPC1-206ENST00000455111 PIGBOS1A0A0B4J2F0 54 aa11.24□□□□□ -0.61
GPC1-206ENST00000455111 SMCO3A2RU48 225 aa11.24□□□□□ -0.61
GPC1-206ENST00000455111 BOLA2-SMG1P6H3BVE0 249 aa11.24□□□□□ -0.61
GPC1-206ENST00000455111 K7EPK0 472 aa11.24□□□□□ -0.61
GPC1-206ENST00000455111 DUSP14O95147 198 aaKnown RBP11.24□□□□□ -0.61
GPC1-206ENST00000455111 INSP01308 110 aa11.24□□□□□ -0.61
GPC1-206ENST00000455111 IFNA21P01568 189 aa11.24□□□□□ -0.61
GPC1-206ENST00000455111 OR8A1Q8NGG7 326 aa11.24□□□□□ -0.61
GPC1-206ENST00000455111 PRAC2D3DTV9 90 aa11.23□□□□□ -0.61
GPC1-206ENST00000455111 HYPMO75409 117 aa11.23□□□□□ -0.61
GPC1-206ENST00000455111 TSPOP30536 169 aa11.23□□□□□ -0.61
GPC1-206ENST00000455111 DLK1P80370 383 aa11.23□□□□□ -0.61
GPC1-206ENST00000455111 PSG3Q16557 428 aa11.23□□□□□ -0.61
GPC1-206ENST00000455111 ZNF738Q8NE65 137 aa11.23□□□□□ -0.61
GPC1-206ENST00000455111 ZNRF2Q8NHG8 242 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms