RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 OSTCQ9NRP0 149 aa9.24□□□□□ -0.93
VTA1-203ENST00000452973 IGHV4-38-2P0DP08 117 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 HIST1H1EP10412 219 aaKnown RBP9.23□□□□□ -0.93
VTA1-203ENST00000452973 C21orf62-AS1Q17RA5 79 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 C15orf32Q32M92 178 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 C5orf17Q8NAS9 161 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 OR4F17Q8NGA8 305 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 ATG101Q9BSB4 218 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 SHANK2-AS3Q9BTD1 123 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 CHRDL1Q9BU40 450 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
VTA1-203ENST00000452973 GNB4Q9HAV0 340 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 F8W735 103 aaPredicted RBP9.23□□□□□ -0.93
VTA1-203ENST00000452973 TCRAP04437 139 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 GPR183P32249 361 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 KIAA1644Q3SXP7 199 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 Q71RC1 249 aaPredicted RBP9.23□□□□□ -0.93
VTA1-203ENST00000452973 NUDT10Q8NFP7 164 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 NUDT11Q96G61 164 aa9.23□□□□□ -0.93
VTA1-203ENST00000452973 GATCO43716 136 aaKnown RBP9.22□□□□□ -0.93
VTA1-203ENST00000452973 HLA-DRB1P01911 266 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 TMEM256Q8N2U0 113 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 TMEM68Q96MH6 324 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 C7orf69Q9H7B7 122 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 NAT8BQ9UHF3 227 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 ZANQ9Y493 2812 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 AMY1AP04745 511 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 RHOGP84095 191 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 PAX8Q06710 450 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 TMEM183BQ1AE95 376 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 PRNTQ86SH4 94 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 MAPK1IP1LQ8NDC0 245 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 TRAV30A0A087WSZ9 112 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 H3BRN7 92 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 M0R3E3 92 aa9.22□□□□□ -0.93
VTA1-203ENST00000452973 IGHV3OR16-13A0A075B7E8 117 aa9.21□□□□□ -0.93
VTA1-203ENST00000452973 IGHV3-74A0A0B4J1X5 117 aa9.21□□□□□ -0.93
VTA1-203ENST00000452973 IGHV1-69DA0A0B4J2H0 117 aa9.21□□□□□ -0.93
VTA1-203ENST00000452973 IGHV1-69P01742 117 aa9.21□□□□□ -0.93
VTA1-203ENST00000452973 AMBPP02760 352 aa9.21□□□□□ -0.93
VTA1-203ENST00000452973 CTSGP08311 255 aa9.21□□□□□ -0.93
VTA1-203ENST00000452973 GPR82Q96P67 336 aa9.21□□□□□ -0.93
VTA1-203ENST00000452973 CLEC3BP05452 202 aa9.21□□□□□ -0.94
VTA1-203ENST00000452973 LINC00322Q6ZN03 302 aaPredicted RBP9.21□□□□□ -0.94
VTA1-203ENST00000452973 TRBV19A0A075B6N1 114 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 IGHV3-66A0A0C4DH42 116 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 WI2-2373I1.2A0A1W2PRP0 233 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 YPEL3P61236 119 aaPredicted RBP9.2□□□□□ -0.94
VTA1-203ENST00000452973 CIARTQ8N365 385 aaPredicted RBP9.2□□□□□ -0.94
VTA1-203ENST00000452973 FBN2P35556 2912 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 NUPR1O60356 82 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 COL8A1P27658 744 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 IGFL4Q6B9Z1 124 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 CLEC19AQ6UXS0 136 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 OTORQ9NRC9 128 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 HIF1ANQ9NWT6 349 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 TMEM14CQ9P0S9 112 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 IGHV3-49A0A0A0MS15 119 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 C5orf56Q8N8D9 126 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 GSN-AS1Q9NRJ2 163 aa9.2□□□□□ -0.94
VTA1-203ENST00000452973 TRAV20A0A0B4J274 112 aa9.19□□□□□ -0.94
VTA1-203ENST00000452973 CRISP2P16562 243 aa9.19□□□□□ -0.94
VTA1-203ENST00000452973 CAMPP49913 170 aa9.19□□□□□ -0.94
VTA1-203ENST00000452973 TCF24Q7RTU0 167 aa9.19□□□□□ -0.94
VTA1-203ENST00000452973 DAZAP1Q96EP5 407 aaKnown RBP9.19□□□□□ -0.94
VTA1-203ENST00000452973 FMC1Q96HJ9 113 aa9.19□□□□□ -0.94
VTA1-203ENST00000452973 NAV2Q8IVL1 2488 aa9.19□□□□□ -0.94
VTA1-203ENST00000452973 SMIM27A0A1W2PRY6 76 aa9.19□□□□□ -0.94
VTA1-203ENST00000452973 ZNF207O43670 478 aaKnown RBP9.19□□□□□ -0.94
VTA1-203ENST00000452973 MSMBP08118 114 aa9.19□□□□□ -0.94
VTA1-203ENST00000452973 IGLC2P0DOY2 106 aa9.19□□□□□ -0.94
VTA1-203ENST00000452973 FAM110DQ8TAY7 271 aaPredicted RBP9.19□□□□□ -0.94
VTA1-203ENST00000452973 KLF12Q9Y4X4 402 aa9.19□□□□□ -0.94
VTA1-203ENST00000452973 HIGD1CA8MV81 97 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 F2Z2F3 143 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 H3BUX3 64 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 NDUFS8O00217 210 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 ZNF414Q96IQ9 312 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 NEU1Q99519 415 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 ZNF331Q9NQX6 463 aaPredicted RBP9.18□□□□□ -0.94
VTA1-203ENST00000452973 TRAV9-1A0A075B6T8 112 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 VWC2LB2RUY7 222 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 RPL19P84098 196 aaKnown RBP9.18□□□□□ -0.94
VTA1-203ENST00000452973 SIGLEC15Q6ZMC9 328 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 BAGE3Q86Y29 109 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 ZNF843Q8N446 348 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 NUP35Q8NFH5 326 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 P01737 135 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 GZMBP10144 247 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 COX6B1P14854 86 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 PIFOQ8TCI5 191 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 NOL4LQ96MY1 436 aaPredicted RBP9.18□□□□□ -0.94
VTA1-203ENST00000452973 RABAC1Q9UI14 185 aa9.18□□□□□ -0.94
VTA1-203ENST00000452973 SCGB2A1O75556 95 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 AVPP01185 164 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 LTAP01374 205 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 SSTP61278 116 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 Q86TA4 180 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 GRAMD2BQ96HH9 432 aa9.17□□□□□ -0.94
VTA1-203ENST00000452973 SSBP4Q9BWG4 385 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms