RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 RAB24Q969Q5 203 aa9.86□□□□□ -0.83
VPS33A-202ENST00000451053 MARC2Q969Z3 335 aa9.86□□□□□ -0.83
VPS33A-202ENST00000451053 NARS2Q96I59 477 aaKnown RBP9.86□□□□□ -0.83
VPS33A-202ENST00000451053 METTL26Q96S19 204 aa9.86□□□□□ -0.83
VPS33A-202ENST00000451053 SLC25A22Q9H936 323 aa9.86□□□□□ -0.83
VPS33A-202ENST00000451053 MRPL27Q9P0M9 148 aaKnown RBP9.86□□□□□ -0.83
VPS33A-202ENST00000451053 SMPXQ9UHP9 88 aa9.86□□□□□ -0.83
VPS33A-202ENST00000451053 MAP1LC3B2A6NCE7 125 aa9.85□□□□□ -0.83
VPS33A-202ENST00000451053 APOHP02749 345 aaPredicted RBP9.85□□□□□ -0.83
VPS33A-202ENST00000451053 FHITP49789 147 aa9.85□□□□□ -0.83
VPS33A-202ENST00000451053 KRTAP10-11P60412 298 aa9.85□□□□□ -0.83
VPS33A-202ENST00000451053 BEAN1Q3B7T3 259 aa9.85□□□□□ -0.83
VPS33A-202ENST00000451053 PATE2Q6UY27 113 aa9.85□□□□□ -0.83
VPS33A-202ENST00000451053 LINC00305Q7Z4B0 112 aa9.85□□□□□ -0.83
VPS33A-202ENST00000451053 STXBP6Q8NFX7 210 aa9.85□□□□□ -0.83
VPS33A-202ENST00000451053 DYNLRB2Q8TF09 96 aa9.85□□□□□ -0.83
VPS33A-202ENST00000451053 MBD3L1Q8WWY6 194 aa9.85□□□□□ -0.83
VPS33A-202ENST00000451053 MAP1LC3BQ9GZQ8 125 aa9.85□□□□□ -0.83
VPS33A-202ENST00000451053 TECRQ9NZ01 308 aaKnown RBP9.85□□□□□ -0.83
VPS33A-202ENST00000451053 TRAV1-1A0A0B4J248 108 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 IGHV3-66A0A0C4DH42 116 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 IZUMO1RA6ND01 250 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 CHEK1O14757 476 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 CXorf1O96002 111 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 NPPCP23582 126 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 CRYBB3P26998 211 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 BMI1P35226 326 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 EGFEM1PQ0D2K5 195 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 ZNF726P1Q15940 193 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 DEFB114Q30KQ6 69 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 CD300EQ496F6 205 aaPredicted RBP9.84□□□□□ -0.83
VPS33A-202ENST00000451053 PQLC2Q6ZP29 291 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 SFT2D1Q8WV19 159 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 SHANK2-AS3Q9BTD1 123 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 RHPN1-AS1Q9BWJ2 59 aa9.84□□□□□ -0.83
VPS33A-202ENST00000451053 SLC25A39Q9BZJ4 359 aaPredicted RBP9.84□□□□□ -0.83
VPS33A-202ENST00000451053 SEPSECSQ9HD40 501 aaKnown RBP9.84□□□□□ -0.83
VPS33A-202ENST00000451053 H3BRN7 92 aa9.83□□□□□ -0.84
VPS33A-202ENST00000451053 STAG3L2P0CL84 134 aa9.83□□□□□ -0.84
VPS33A-202ENST00000451053 STAG3L3P0CL85 134 aa9.83□□□□□ -0.84
VPS33A-202ENST00000451053 KPRPQ5T749 579 aaPredicted RBP9.83□□□□□ -0.84
VPS33A-202ENST00000451053 LCN15Q6UWW0 184 aa9.83□□□□□ -0.84
VPS33A-202ENST00000451053 MIR17HGQ75NE6 70 aa9.83□□□□□ -0.84
VPS33A-202ENST00000451053 UHRF2Q96PU4 802 aa9.83□□□□□ -0.84
VPS33A-202ENST00000451053 TMEM231Q9H6L2 316 aa9.83□□□□□ -0.84
VPS33A-202ENST00000451053 U3KQE9 123 aa9.83□□□□□ -0.84
VPS33A-202ENST00000451053 A0A1W2PS18 150 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 OR7C2O60412 319 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 PPT1P50897 306 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 C1orf194Q5T5A4 169 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 SPATA31B1PQ5VZV4 182 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 TMEM61Q8N0U2 210 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 OR2K2Q8NGT1 345 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 LYPD6BQ8NI32 183 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 GRAMD2BQ96HH9 432 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 GPR82Q96P67 336 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 HRH4Q9H3N8 390 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 TMEM167BQ9NRX6 74 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 PKD1L1Q8TDX9 2849 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 NOTCH3Q9UM47 2321 aa9.82□□□□□ -0.84
VPS33A-202ENST00000451053 ZNF98A6NK75 572 aa9.81□□□□□ -0.84
VPS33A-202ENST00000451053 HMGB3O15347 200 aaKnown RBP9.81□□□□□ -0.84
VPS33A-202ENST00000451053 IFNA1P01562 189 aa9.81□□□□□ -0.84
VPS33A-202ENST00000451053 ARL14EPLP0DKL9 152 aa9.81□□□□□ -0.84
VPS33A-202ENST00000451053 PSMB3P49720 205 aa9.81□□□□□ -0.84
VPS33A-202ENST00000451053 SSX7Q7RTT5 188 aa9.81□□□□□ -0.84
VPS33A-202ENST00000451053 BPIFA4PQ86YQ2 179 aa9.81□□□□□ -0.84
VPS33A-202ENST00000451053 PCNPQ8WW12 178 aaKnown RBP9.81□□□□□ -0.84
VPS33A-202ENST00000451053 SCRT1Q9BWW7 348 aa9.81□□□□□ -0.84
VPS33A-202ENST00000451053 TMEM14CQ9P0S9 112 aa9.81□□□□□ -0.84
VPS33A-202ENST00000451053 PRB2P02812 416 aaPredicted RBP9.8□□□□□ -0.84
VPS33A-202ENST00000451053 RPL7P18124 248 aaKnown RBP9.8□□□□□ -0.84
VPS33A-202ENST00000451053 GCHFRP30047 84 aa9.8□□□□□ -0.84
VPS33A-202ENST00000451053 FGF8P55075 233 aaPredicted RBP9.8□□□□□ -0.84
VPS33A-202ENST00000451053 NDUFA5Q16718 116 aa9.8□□□□□ -0.84
VPS33A-202ENST00000451053 LCN12Q6JVE5 192 aa9.8□□□□□ -0.84
VPS33A-202ENST00000451053 IQCF2Q8IXL9 164 aa9.8□□□□□ -0.84
VPS33A-202ENST00000451053 OR8I2Q8N0Y5 310 aa9.8□□□□□ -0.84
VPS33A-202ENST00000451053 FAM167A-AS1Q96KT0 104 aa9.8□□□□□ -0.84
VPS33A-202ENST00000451053 PAXXQ9BUH6 204 aa9.8□□□□□ -0.84
VPS33A-202ENST00000451053 SLC25A2Q9BXI2 301 aa9.8□□□□□ -0.84
VPS33A-202ENST00000451053 OR51M1Q9H341 326 aa9.8□□□□□ -0.84
VPS33A-202ENST00000451053 MED9Q9NWA0 146 aa9.8□□□□□ -0.84
VPS33A-202ENST00000451053 ZNF256Q9Y2P7 627 aaPredicted RBP9.8□□□□□ -0.84
VPS33A-202ENST00000451053 MGAM2Q2M2H8 2515 aa9.8□□□□□ -0.84
VPS33A-202ENST00000451053 A0A1B0GV50 99 aa9.79□□□□□ -0.84
VPS33A-202ENST00000451053 ZNF785A8K8V0 405 aa9.79□□□□□ -0.84
VPS33A-202ENST00000451053 BUB3O43684 328 aa9.79□□□□□ -0.84
VPS33A-202ENST00000451053 TAGLN2P37802 199 aaKnown RBP9.79□□□□□ -0.84
VPS33A-202ENST00000451053 UBE2L3P68036 154 aaKnown RBP9.79□□□□□ -0.84
VPS33A-202ENST00000451053 PMS2P11Q13670 270 aa9.79□□□□□ -0.84
VPS33A-202ENST00000451053 GUCA2BQ16661 112 aa9.79□□□□□ -0.84
VPS33A-202ENST00000451053 MORN5Q5VZ52 161 aa9.79□□□□□ -0.84
VPS33A-202ENST00000451053 FAM90A2PQ658T7 463 aa9.79□□□□□ -0.84
VPS33A-202ENST00000451053 C16orf54Q6UWD8 224 aa9.79□□□□□ -0.84
VPS33A-202ENST00000451053 RBPMS2Q6ZRY4 209 aaKnown RBP9.79□□□□□ -0.84
VPS33A-202ENST00000451053 TCF24Q7RTU0 167 aa9.79□□□□□ -0.84
VPS33A-202ENST00000451053 GLMPQ8WWB7 406 aa9.79□□□□□ -0.84
VPS33A-202ENST00000451053 PRR25Q96S07 402 aa9.79□□□□□ -0.84
VPS33A-202ENST00000451053 MANBALQ9NQG1 85 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms