RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 RPL29P47914 159 aaKnown RBP12.87□□□□□ -0.35
PRPF40A-204ENST00000450303 ZNF90Q03938 601 aa12.87□□□□□ -0.35
PRPF40A-204ENST00000450303 GUCA2BQ16661 112 aa12.87□□□□□ -0.35
PRPF40A-204ENST00000450303 ATRAIDQ6UW56 229 aa12.87□□□□□ -0.35
PRPF40A-204ENST00000450303 OR51G1Q8NGK1 321 aa12.87□□□□□ -0.35
PRPF40A-204ENST00000450303 RCHY1Q96PM5 261 aa12.87□□□□□ -0.35
PRPF40A-204ENST00000450303 RSG1Q9BU20 258 aa12.87□□□□□ -0.35
PRPF40A-204ENST00000450303 SIGLEC8Q9NYZ4 499 aa12.87□□□□□ -0.35
PRPF40A-204ENST00000450303 TENM3Q9P273 2699 aa12.87□□□□□ -0.35
PRPF40A-204ENST00000450303 HUWE1Q7Z6Z7 4374 aaKnown RBP12.86□□□□□ -0.35
PRPF40A-204ENST00000450303 A0A1B0GV50 99 aa12.86□□□□□ -0.35
PRPF40A-204ENST00000450303 PSG1P11464 419 aa12.86□□□□□ -0.35
PRPF40A-204ENST00000450303 TAGLN2P37802 199 aaKnown RBP12.86□□□□□ -0.35
PRPF40A-204ENST00000450303 LCN12Q6JVE5 192 aa12.86□□□□□ -0.35
PRPF40A-204ENST00000450303 S100A7AQ86SG5 101 aa12.86□□□□□ -0.35
PRPF40A-204ENST00000450303 MBD3L1Q8WWY6 194 aa12.86□□□□□ -0.35
PRPF40A-204ENST00000450303 GGTLC1Q9BX51 225 aa12.86□□□□□ -0.35
PRPF40A-204ENST00000450303 SLC45A2Q9UMX9 530 aa12.86□□□□□ -0.35
PRPF40A-204ENST00000450303 PUS1Q9Y606 427 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRPF40A-204ENST00000450303 IGHV3-35A0A0C4DH35 117 aa12.85□□□□□ -0.35
PRPF40A-204ENST00000450303 DNASE2O00115 360 aaPredicted RBP12.85□□□□□ -0.35
PRPF40A-204ENST00000450303 ACOT6Q3I5F7 207 aaPredicted RBP12.85□□□□□ -0.35
PRPF40A-204ENST00000450303 CD300EQ496F6 205 aaPredicted RBP12.85□□□□□ -0.35
PRPF40A-204ENST00000450303 KHDC3LQ587J8 217 aa12.85□□□□□ -0.35
PRPF40A-204ENST00000450303 ZNF506Q5JVG8 444 aa12.85□□□□□ -0.35
PRPF40A-204ENST00000450303 CLRN3Q8NCR9 226 aa12.85□□□□□ -0.35
PRPF40A-204ENST00000450303 DYNLRB2Q8TF09 96 aa12.85□□□□□ -0.35
PRPF40A-204ENST00000450303 SLC39A9Q9NUM3 307 aa12.85□□□□□ -0.35
PRPF40A-204ENST00000450303 C19orf73Q9NVV2 129 aa12.85□□□□□ -0.35
PRPF40A-204ENST00000450303 PXMP4Q9Y6I8 212 aa12.85□□□□□ -0.35
PRPF40A-204ENST00000450303 ZNF320A2RRD8 509 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 C2orf70A6NJV1 201 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 LGALS9O00182 355 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 IL4P05112 153 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 LINC00869P0C866 280 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 FOLR2P14207 255 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 ELLP55199 621 aaPredicted RBP12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 B2MP61769 119 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 SOHLH1Q5JUK2 328 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 TOMM20LQ6UXN7 152 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 C20orf24Q9BUV8 137 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 ACTR3CQ9C0K3 210 aaPredicted RBP12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 ZMAT4Q9H898 229 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 RPRMQ9NS64 109 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 UFC1Q9Y3C8 167 aa12.84□□□□□ -0.35
PRPF40A-204ENST00000450303 MAP1LC3B2A6NCE7 125 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 ZNF785A8K8V0 405 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 GATA2P23769 480 aaPredicted RBP12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 LYZP61626 148 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 DEFB114Q30KQ6 69 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 FFAR4Q5NUL3 377 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 MIC13Q5XKP0 118 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 GTSCR1Q86UQ5 136 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 STPG3Q8N7X2 389 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 OR1L4Q8NGR5 311 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 RNF125Q96EQ8 232 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 MAP1LC3BQ9GZQ8 125 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 SMCO4Q9NRQ5 59 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 RFNGQ9Y644 331 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 STAB2Q8WWQ8 2551 aa12.83□□□□□ -0.36
PRPF40A-204ENST00000450303 CTXND1A0A1B0GTU2 59 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 A8MZ25 164 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 K7EMT4 169 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 M0R036 132 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 HYPMO75409 117 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 PLP1P60201 277 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 PRR20EP86478 221 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 PRR20CP86479 221 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 PRR20DP86480 221 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 PRR20BP86481 221 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 PRR20AP86496 221 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 HAGHQ16775 308 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 OR10G4Q8NGN3 311 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 OR2K2Q8NGT1 345 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 TMEM190Q8WZ59 177 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 METTL26Q96S19 204 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 PFDN5Q99471 154 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 SCRT1Q9BWW7 348 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 TUBA4BQ9H853 241 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 RABAC1Q9UI14 185 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 RNF24Q9Y225 148 aa12.82□□□□□ -0.36
PRPF40A-204ENST00000450303 NBEAL2Q6ZNJ1 2754 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 ELOA3CA0A087WX78 387 aaPredicted RBP12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 LOC102723971A0A1B0GUV8 181 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 FAM74A7A6NL05 159 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 C9JQL5 133 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 COX7A2P2O60397 106 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 OR5G3P0C626 314 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 ATF4P18848 351 aaPredicted RBP12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 ORM2P19652 201 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 CBLN1P23435 193 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 NPPCP23582 126 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 BMI1P35226 326 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 CD81P60033 236 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 PMS2P11Q13670 270 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 RHEBQ15382 184 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 FAM74A3Q4VXF1 159 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 LCN15Q6UWW0 184 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 OR10G9Q8NGN4 311 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 OR10G7Q8NGN6 311 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms