RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 LYZL2Q7Z4W2 148 aa12.54□□□□□ -0.4
CHCHD3-203ENST00000448878 IL22RA2Q969J5 263 aa12.54□□□□□ -0.4
CHCHD3-203ENST00000448878 NOP10Q9NPE3 64 aaKnown RBP12.54□□□□□ -0.4
CHCHD3-203ENST00000448878 A0A0J9YY99 117 aa12.53□□□□□ -0.4
CHCHD3-203ENST00000448878 BOLA2-SMG1P6H3BVE0 249 aa12.53□□□□□ -0.4
CHCHD3-203ENST00000448878 CFDP00746 253 aaPredicted RBP12.53□□□□□ -0.4
CHCHD3-203ENST00000448878 IAPPP10997 89 aa12.53□□□□□ -0.4
CHCHD3-203ENST00000448878 HIST1H1AQ02539 215 aaPredicted RBP12.53□□□□□ -0.4
CHCHD3-203ENST00000448878 TMEM144Q7Z5S9 345 aa12.53□□□□□ -0.4
CHCHD3-203ENST00000448878 C16orf74Q96GX8 76 aa12.53□□□□□ -0.4
CHCHD3-203ENST00000448878 TMEM147Q9BVK8 224 aa12.53□□□□□ -0.4
CHCHD3-203ENST00000448878 KRTAP1-5Q9BYS1 174 aa12.53□□□□□ -0.4
CHCHD3-203ENST00000448878 TRAV26-1A0A087WT03 109 aa12.52□□□□□ -0.41
CHCHD3-203ENST00000448878 AKAIN1P0CW23 69 aa12.52□□□□□ -0.41
CHCHD3-203ENST00000448878 AKR1C4P17516 323 aa12.52□□□□□ -0.41
CHCHD3-203ENST00000448878 GATA2P23769 480 aaPredicted RBP12.52□□□□□ -0.41
CHCHD3-203ENST00000448878 S100A7P31151 101 aa12.52□□□□□ -0.41
CHCHD3-203ENST00000448878 TAS2R60P59551 318 aa12.52□□□□□ -0.41
CHCHD3-203ENST00000448878 TMEM256Q8N2U0 113 aa12.52□□□□□ -0.41
CHCHD3-203ENST00000448878 BPIFCQ8NFQ6 507 aa12.52□□□□□ -0.41
CHCHD3-203ENST00000448878 C17orf77Q96MU5 243 aa12.52□□□□□ -0.41
CHCHD3-203ENST00000448878 GPR82Q96P67 336 aa12.52□□□□□ -0.41
CHCHD3-203ENST00000448878 Q9H3A6 140 aa12.52□□□□□ -0.41
CHCHD3-203ENST00000448878 ZNF586Q9NXT0 402 aa12.52□□□□□ -0.41
CHCHD3-203ENST00000448878 IGKV1OR2-108A0A075B7D4 117 aa12.51□□□□□ -0.41
CHCHD3-203ENST00000448878 A0A0B4J2A0 478 aa12.51□□□□□ -0.41
CHCHD3-203ENST00000448878 RGS5O15539 181 aa12.51□□□□□ -0.41
CHCHD3-203ENST00000448878 PRB4P10163 310 aaPredicted RBP12.51□□□□□ -0.41
CHCHD3-203ENST00000448878 OR51S1Q8NGJ8 323 aa12.51□□□□□ -0.41
CHCHD3-203ENST00000448878 OR4D5Q8NGN0 318 aa12.51□□□□□ -0.41
CHCHD3-203ENST00000448878 OR10J6PQ8NGY7 276 aa12.51□□□□□ -0.41
CHCHD3-203ENST00000448878 LRRC20Q8TCA0 184 aa12.51□□□□□ -0.41
CHCHD3-203ENST00000448878 PRRT1Q99946 306 aa12.51□□□□□ -0.41
CHCHD3-203ENST00000448878 SHPKQ9UHJ6 478 aa12.51□□□□□ -0.41
CHCHD3-203ENST00000448878 APOBP04114 4563 aaKnown RBP12.51□□□□□ -0.41
CHCHD3-203ENST00000448878 TRAV8-2A0A0B4J237 113 aa12.5□□□□□ -0.41
CHCHD3-203ENST00000448878 BTF3P20290 206 aaKnown RBP12.5□□□□□ -0.41
CHCHD3-203ENST00000448878 SSBP1Q04837 148 aaKnown RBP12.5□□□□□ -0.41
CHCHD3-203ENST00000448878 CLVS1Q8IUQ0 354 aaPredicted RBP12.5□□□□□ -0.41
CHCHD3-203ENST00000448878 THAP8Q8NA92 274 aa12.5□□□□□ -0.41
CHCHD3-203ENST00000448878 PTTG2Q9NZH5 202 aa12.5□□□□□ -0.41
CHCHD3-203ENST00000448878 SLC45A2Q9UMX9 530 aa12.5□□□□□ -0.41
CHCHD3-203ENST00000448878 ADAP1O75689 374 aa12.49□□□□□ -0.41
CHCHD3-203ENST00000448878 ANXA3P12429 323 aa12.49□□□□□ -0.41
CHCHD3-203ENST00000448878 M6PRP20645 277 aa12.49□□□□□ -0.41
CHCHD3-203ENST00000448878 ESRGQ1W209 222 aa12.49□□□□□ -0.41
CHCHD3-203ENST00000448878 RXFP4Q8TDU9 374 aa12.49□□□□□ -0.41
CHCHD3-203ENST00000448878 HERC1Q15751 4861 aa12.49□□□□□ -0.41
CHCHD3-203ENST00000448878 FUSP35637 526 aaKnown RBP eCLIP12.48□□□□□ -0.41
CHCHD3-203ENST00000448878 MRPS10P82664 201 aaKnown RBP12.48□□□□□ -0.41
CHCHD3-203ENST00000448878 AKR1C1Q04828 323 aa12.48□□□□□ -0.41
CHCHD3-203ENST00000448878 TMEM182Q6ZP80 229 aaPredicted RBP12.48□□□□□ -0.41
CHCHD3-203ENST00000448878 ZNF493Q6ZR52 646 aa12.48□□□□□ -0.41
CHCHD3-203ENST00000448878 OR8A1Q8NGG7 326 aa12.48□□□□□ -0.41
CHCHD3-203ENST00000448878 SCGB3A2Q96PL1 93 aa12.48□□□□□ -0.41
CHCHD3-203ENST00000448878 A0A1W2PPQ1 181 aa12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 GAGE12BA1L429 117 aa12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 ZNF701M0R085 212 aaPredicted RBP12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 GAGE7O76087 117 aa12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 RAP2BP61225 183 aa12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 RPP30P78346 268 aaKnown RBP12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 CCDC28AQ8IWP9 274 aa12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 MCUBQ9NWR8 336 aa12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 SCP2D1Q9UJQ7 156 aa12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 DNAH5Q8TE73 4624 aa12.47□□□□□ -0.41
CHCHD3-203ENST00000448878 WRBO00258 174 aa12.46□□□□□ -0.41
CHCHD3-203ENST00000448878 EREGO14944 169 aa12.46□□□□□ -0.41
CHCHD3-203ENST00000448878 CDKN1BP46527 198 aa12.46□□□□□ -0.41
CHCHD3-203ENST00000448878 SRPXP78539 464 aa12.46□□□□□ -0.41
CHCHD3-203ENST00000448878 IL18Q14116 193 aa12.46□□□□□ -0.41
CHCHD3-203ENST00000448878 TMEM263Q8WUH6 116 aaKnown RBP12.46□□□□□ -0.41
CHCHD3-203ENST00000448878 UPK3BQ9BT76 320 aa12.46□□□□□ -0.41
CHCHD3-203ENST00000448878 NAA50Q9GZZ1 169 aaKnown RBP12.46□□□□□ -0.41
CHCHD3-203ENST00000448878 MIXL1Q9H2W2 232 aa12.46□□□□□ -0.41
CHCHD3-203ENST00000448878 PGPEP1Q9NXJ5 209 aa12.46□□□□□ -0.41
CHCHD3-203ENST00000448878 SMCO3A2RU48 225 aa12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 MED6O75586 246 aa12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 RLN2P04090 185 aa12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 OR5G3P0C626 314 aa12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 RPL7P18124 248 aaKnown RBP12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 LINC00315P59091 139 aa12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 PSG3Q16557 428 aa12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 LYPD1Q8N2G4 141 aa12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 RNASE8Q8TDE3 154 aaKnown RBP12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 SMIM4Q8WVI0 70 aa12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 FRZBQ92765 325 aa12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 ZNF503Q96F45 646 aa12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 HIGD1AQ9Y241 93 aa12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 MRPS16Q9Y3D3 137 aaKnown RBP12.45□□□□□ -0.42
CHCHD3-203ENST00000448878 SNURFLB1AK76 121 aa12.44□□□□□ -0.42
CHCHD3-203ENST00000448878 H3BRN7 92 aa12.44□□□□□ -0.42
CHCHD3-203ENST00000448878 H7BYZ3 331 aa12.44□□□□□ -0.42
CHCHD3-203ENST00000448878 IL5P05113 134 aa12.44□□□□□ -0.42
CHCHD3-203ENST00000448878 CXCL3P19876 107 aa12.44□□□□□ -0.42
CHCHD3-203ENST00000448878 HOXA5P20719 270 aa12.44□□□□□ -0.42
CHCHD3-203ENST00000448878 SPANXN5Q5MJ07 72 aa12.44□□□□□ -0.42
CHCHD3-203ENST00000448878 CTDSP2O14595 271 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms