RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, human

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-208	ENST00000448611	TRBV7-1	A0A0A6YYK4	115 aa		13.75	□□□□□ -0.21
LMNA-208	ENST00000448611		A0A1W2PPQ1	181 aa		13.75	□□□□□ -0.21
LMNA-208	ENST00000448611	TMEM183B	Q1AE95	376 aa		13.75	□□□□□ -0.21
LMNA-208	ENST00000448611	KCNIP4	Q6PIL6	250 aa		13.75	□□□□□ -0.21
LMNA-208	ENST00000448611	OR4F17	Q8NGA8	305 aa		13.75	□□□□□ -0.21
LMNA-208	ENST00000448611	OTOR	Q9NRC9	128 aa		13.75	□□□□□ -0.21
LMNA-208	ENST00000448611	RNF24	Q9Y225	148 aa		13.75	□□□□□ -0.21
LMNA-208	ENST00000448611	KLF12	Q9Y4X4	402 aa		13.75	□□□□□ -0.21
LMNA-208	ENST00000448611	TRAV34	A0A0B4J273	112 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	FAM223B	A6NKX1	122 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	ISLR	O14498	428 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	TGOLN2	O43493	480 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	PPIF	P30405	207 aa	Known RBP	13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	FAM3B	P58499	235 aa	Predicted RBP	13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	FOXL1	Q12952	345 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	CLEC19A	Q6UXS0	136 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	FAM223A	Q8IWN6	122 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	ATG101	Q9BSB4	218 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	SAV1	Q9H4B6	383 aa	Predicted RBP	13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	ZFAND3	Q9H8U3	227 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	BRI3	O95415	125 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	IGHV4-59	P01825	116 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	TRGC2	P03986	189 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	TCRA	P04437	139 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	ATP5G2	Q06055	141 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	TOMM20L	Q6UXN7	152 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611		Q6ZS46	218 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	C17orf77	Q96MU5	243 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	SRD5A3	Q9H8P0	318 aa		13.74	□□□□□ -0.21
LMNA-208	ENST00000448611	IER3	P46695	156 aa		13.73	□□□□□ -0.21
LMNA-208	ENST00000448611	ERVFC1-1	P60608	527 aa		13.73	□□□□□ -0.21
LMNA-208	ENST00000448611	C9orf139	Q6ZV77	190 aa		13.73	□□□□□ -0.21
LMNA-208	ENST00000448611	EXOC3-AS1	Q8N2X6	119 aa		13.73	□□□□□ -0.21
LMNA-208	ENST00000448611	NOL4L	Q96MY1	436 aa	Predicted RBP	13.73	□□□□□ -0.21
LMNA-208	ENST00000448611	ATP6V0B	Q99437	205 aa		13.73	□□□□□ -0.21
LMNA-208	ENST00000448611	RABAC1	Q9UI14	185 aa		13.73	□□□□□ -0.21
LMNA-208	ENST00000448611	IGHV3-35	A0A0C4DH35	117 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	SLC17A3	O00476	420 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	PHOX2A	O14813	284 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	TYMS	P04818	313 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	BAGE2	Q86Y30	109 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	OSTC	Q9NRP0	149 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611		V9GYV3	84 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	NOTCH2	Q04721	2471 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	C5orf52	A6NGY3	159 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611		H3BUA1	57 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	BMPR1B	O00238	502 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	TRGV3	P03979	118 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	SNRPE	P62304	92 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	SIGLEC15	Q6ZMC9	328 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	LYPD1	Q8N2G4	141 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	NHLRC2	Q8NBF2	726 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	TMEM190	Q8WZ59	177 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	FOXC2	Q99958	501 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	RNASE7	Q9H1E1	156 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	IL36B	Q9NZH7	164 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	RPH3AL	Q9UNE2	315 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	CCDC168	Q8NDH2	2452 aa		13.72	□□□□□ -0.21
LMNA-208	ENST00000448611	PPP5D1	E7EU14	171 aa		13.71	□□□□□ -0.21
LMNA-208	ENST00000448611	AP4M1	O00189	453 aa		13.71	□□□□□ -0.21
LMNA-208	ENST00000448611	MGST1	P10620	155 aa	Known RBP	13.71	□□□□□ -0.21
LMNA-208	ENST00000448611	UBE2G1	P62253	170 aa		13.71	□□□□□ -0.21
LMNA-208	ENST00000448611	IGHV3OR16-8	A0A075B7F1	116 aa		13.7	□□□□□ -0.22
LMNA-208	ENST00000448611	S100A9	P06702	114 aa	Known RBP	13.7	□□□□□ -0.22
LMNA-208	ENST00000448611	S100A6	P06703	90 aa		13.7	□□□□□ -0.22
LMNA-208	ENST00000448611	PDE6H	Q13956	83 aa		13.7	□□□□□ -0.22
LMNA-208	ENST00000448611	FMC1	Q96HJ9	113 aa		13.7	□□□□□ -0.22
LMNA-208	ENST00000448611	GNB4	Q9HAV0	340 aa		13.7	□□□□□ -0.22
LMNA-208	ENST00000448611	RPL7	P18124	248 aa	Known RBP	13.7	□□□□□ -0.22
LMNA-208	ENST00000448611	CYB5R2	Q6BCY4	276 aa		13.7	□□□□□ -0.22
LMNA-208	ENST00000448611	WFDC11	Q8NEX6	87 aa		13.7	□□□□□ -0.22
LMNA-208	ENST00000448611	SGK494	Q96LW2	274 aa		13.7	□□□□□ -0.22
LMNA-208	ENST00000448611	ZNF580	Q9UK33	172 aa		13.7	□□□□□ -0.22
LMNA-208	ENST00000448611	PRRC2A	P48634	2157 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-208	ENST00000448611	CLPSL1	A2RUU4	121 aa		13.69	□□□□□ -0.22
LMNA-208	ENST00000448611	S100A7	P31151	101 aa		13.69	□□□□□ -0.22
LMNA-208	ENST00000448611	TPPP2	P59282	170 aa		13.69	□□□□□ -0.22
LMNA-208	ENST00000448611	IBA57	Q5T440	356 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-208	ENST00000448611	OR5R1	Q8NH85	324 aa		13.69	□□□□□ -0.22
LMNA-208	ENST00000448611	CMTM2	Q8TAZ6	248 aa		13.69	□□□□□ -0.22
LMNA-208	ENST00000448611	FRZB	Q92765	325 aa		13.69	□□□□□ -0.22
LMNA-208	ENST00000448611	SMIM12	Q96EX1	92 aa		13.69	□□□□□ -0.22
LMNA-208	ENST00000448611	GPR82	Q96P67	336 aa		13.69	□□□□□ -0.22
LMNA-208	ENST00000448611	CSPG4	Q6UVK1	2322 aa		13.69	□□□□□ -0.22
LMNA-208	ENST00000448611	HIST1H2BK	O60814	126 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	LTA	P01374	205 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	HIST1H2BJ	P06899	126 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	HIST1H2BO	P23527	126 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	HIST1H2BB	P33778	126 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	HIST1H2BD	P58876	126 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	RPL15	P61313	204 aa	Known RBP	13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	HIST1H2BC	P62807	126 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	CFHR3	Q02985	330 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	REL	Q04864	619 aa	Predicted RBP	13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	HIST2H2BE	Q16778	126 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	HIST1H2BH	Q93079	126 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	BTF3L4	Q96K17	158 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	HIST1H2BN	Q99877	126 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	HIST1H2BM	Q99879	126 aa		13.68	□□□□□ -0.22

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