RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 ZFP2Q6ZN57 461 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 ZNF493Q6ZR52 646 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 LINC00526Q96FQ7 95 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 HS3ST6Q96QI5 342 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 TRAV8-1A0A0A6YYK1 113 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 TRGV8A0A0C4DH27 118 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 DPM2O94777 84 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 TCL1BO95988 128 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 CA6P23280 308 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 COL8A2P25067 703 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 DUTP33316 252 aaKnown RBP8.58□□□□□ -1.04
LINC00342-202ENST00000448494 HSPE1P61604 102 aaKnown RBP8.58□□□□□ -1.04
LINC00342-202ENST00000448494 FOXC1Q12948 553 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 TWIST1Q15672 202 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 TMSB15BA0A087X1C1 80 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 TRAV2A0A0B4J234 112 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 A0A1W2PRU2 124 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 OOSP1A8MZH6 123 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 H3BVH4 76 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 CRYGDP07320 174 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 UBE2D1P51668 147 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 EDDM3AQ14507 147 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 GTSCR1Q86UQ5 136 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 MAPKAPK5-AS1Q8N8E1 139 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 LINC01600Q96MT4 127 aa8.58□□□□□ -1.04
LINC00342-202ENST00000448494 LINC01549A6NIU2 74 aa8.57□□□□□ -1.04
LINC00342-202ENST00000448494 PRSS12P56730 875 aa8.57□□□□□ -1.04
LINC00342-202ENST00000448494 ZC2HC1BQ5TFG8 222 aa8.57□□□□□ -1.04
LINC00342-202ENST00000448494 FAM27BQ5VT28 67 aa8.57□□□□□ -1.04
LINC00342-202ENST00000448494 TEX36Q5VZQ5 186 aa8.57□□□□□ -1.04
LINC00342-202ENST00000448494 FGFBP3Q8TAT2 258 aa8.57□□□□□ -1.04
LINC00342-202ENST00000448494 KLF13Q9Y2Y9 288 aaPredicted RBP8.57□□□□□ -1.04
LINC00342-202ENST00000448494 SLC25A20O43772 301 aa8.57□□□□□ -1.04
LINC00342-202ENST00000448494 ATP5LO75964 103 aa8.57□□□□□ -1.04
LINC00342-202ENST00000448494 RPL13AP40429 203 aaKnown RBP8.57□□□□□ -1.04
LINC00342-202ENST00000448494 LINC00322Q6ZN03 302 aaPredicted RBP8.57□□□□□ -1.04
LINC00342-202ENST00000448494 ITLN1Q8WWA0 313 aa8.57□□□□□ -1.04
LINC00342-202ENST00000448494 FAM167A-AS1Q96KT0 104 aa8.57□□□□□ -1.04
LINC00342-202ENST00000448494 COL5A1P20908 1838 aaPredicted RBP8.57□□□□□ -1.04
LINC00342-202ENST00000448494 OVOL3O00110 214 aa8.56□□□□□ -1.04
LINC00342-202ENST00000448494 ASCL5Q7RTU5 278 aa8.56□□□□□ -1.04
LINC00342-202ENST00000448494 MYOZ3Q8TDC0 251 aa8.56□□□□□ -1.04
LINC00342-202ENST00000448494 IMUPQ9GZP8 106 aa8.56□□□□□ -1.04
LINC00342-202ENST00000448494 EFNA2O43921 213 aa8.56□□□□□ -1.04
LINC00342-202ENST00000448494 ATP5G1P05496 136 aa8.56□□□□□ -1.04
LINC00342-202ENST00000448494 MYCNOSP40205 109 aa8.56□□□□□ -1.04
LINC00342-202ENST00000448494 DLX6P56179 175 aa8.56□□□□□ -1.04
LINC00342-202ENST00000448494 FMC1Q96HJ9 113 aa8.56□□□□□ -1.04
LINC00342-202ENST00000448494 CHCHD2Q9Y6H1 151 aaPredicted RBP8.56□□□□□ -1.04
LINC00342-202ENST00000448494 CACNA1IQ9P0X4 2223 aa8.56□□□□□ -1.04
LINC00342-202ENST00000448494 LOC389332A0A1B0GUA5 103 aa8.55□□□□□ -1.04
LINC00342-202ENST00000448494 NCBP2LA6PVI3 153 aaKnown RBP8.55□□□□□ -1.04
LINC00342-202ENST00000448494 CD7P09564 240 aa8.55□□□□□ -1.04
LINC00342-202ENST00000448494 ZNF497Q6ZNH5 498 aa8.55□□□□□ -1.04
LINC00342-202ENST00000448494 TRPT1Q86TN4 253 aaKnown RBP8.55□□□□□ -1.04
LINC00342-202ENST00000448494 Q8N1Y9 231 aa8.55□□□□□ -1.04
LINC00342-202ENST00000448494 TIMD4Q96H15 378 aa8.55□□□□□ -1.04
LINC00342-202ENST00000448494 ASCL2Q99929 193 aa8.55□□□□□ -1.04
LINC00342-202ENST00000448494 GNG5P63218 68 aa8.55□□□□□ -1.04
LINC00342-202ENST00000448494 C11orf53Q8IXP5 236 aa8.55□□□□□ -1.04
LINC00342-202ENST00000448494 ORMDL3Q8N138 153 aa8.55□□□□□ -1.04
LINC00342-202ENST00000448494 CFHR4Q92496 578 aa8.55□□□□□ -1.04
LINC00342-202ENST00000448494 TANC2Q9HCD6 1990 aa8.55□□□□□ -1.04
LINC00342-202ENST00000448494 MUC22E2RYF6 1773 aaPredicted RBP8.55□□□□□ -1.04
LINC00342-202ENST00000448494 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 TIMM23O14925 209 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 DEFB110Q30KQ9 67 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 ZNF441Q8N8Z8 693 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 CALYQ9NYX4 217 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 PTPRBP23467 1997 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 EYSQ5T1H1 3165 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 FAM240AA0A1B0GVK7 77 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 PRSS38A1L453 326 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 TMEM150CB9EJG8 249 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 D6R8Y8 96 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 LGALS1P09382 135 aaKnown RBP8.54□□□□□ -1.04
LINC00342-202ENST00000448494 SLC37A2Q8TED4 501 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 TMEM190Q8WZ59 177 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 FLYWCH2Q96CP2 140 aaKnown RBP8.54□□□□□ -1.04
LINC00342-202ENST00000448494 PAXXQ9BUH6 204 aa8.54□□□□□ -1.04
LINC00342-202ENST00000448494 VCANP13611 3396 aa8.53□□□□□ -1.04
LINC00342-202ENST00000448494 IGHV3OR15-7A0A075B7D8 119 aa8.53□□□□□ -1.04
LINC00342-202ENST00000448494 MBD3L4A6NDZ8 208 aaPredicted RBP8.53□□□□□ -1.04
LINC00342-202ENST00000448494 MBD3L3A6NE82 208 aaPredicted RBP8.53□□□□□ -1.04
LINC00342-202ENST00000448494 MBD3L5A6NJ08 208 aaPredicted RBP8.53□□□□□ -1.04
LINC00342-202ENST00000448494 J3QLI3 93 aa8.53□□□□□ -1.04
LINC00342-202ENST00000448494 PRSS1P07477 247 aa8.53□□□□□ -1.04
LINC00342-202ENST00000448494 MMABQ96EY8 250 aaPredicted RBP8.53□□□□□ -1.04
LINC00342-202ENST00000448494 FAM173AQ9BQD7 235 aa8.53□□□□□ -1.04
LINC00342-202ENST00000448494 FGF23Q9GZV9 251 aaPredicted RBP8.53□□□□□ -1.04
LINC00342-202ENST00000448494 AAMDCQ9H7C9 122 aa8.53□□□□□ -1.04
LINC00342-202ENST00000448494 TTC28Q96AY4 2481 aa8.53□□□□□ -1.04
LINC00342-202ENST00000448494 RBAKDNA6NC62 111 aa8.53□□□□□ -1.04
LINC00342-202ENST00000448494 ARMS2P0C7Q2 107 aa8.53□□□□□ -1.04
LINC00342-202ENST00000448494 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
LINC00342-202ENST00000448494 POM121L12Q8N7R1 296 aa8.53□□□□□ -1.04
LINC00342-202ENST00000448494 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.53□□□□□ -1.04
LINC00342-202ENST00000448494 IGFBPL1Q8WX77 278 aa8.53□□□□□ -1.04
LINC00342-202ENST00000448494 MRPL20Q9BYC9 149 aaKnown RBP8.53□□□□□ -1.04
LINC00342-202ENST00000448494 SEC61GP60059 68 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms