RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 LINC00311Q8N616 119 aa10.31□□□□□ -0.76
SHC1-210ENST00000448116 C5orf17Q8NAS9 161 aa10.31□□□□□ -0.76
SHC1-210ENST00000448116 WIPF2Q8TF74 440 aaPredicted RBP10.31□□□□□ -0.76
SHC1-210ENST00000448116 IGFBPL1Q8WX77 278 aa10.31□□□□□ -0.76
SHC1-210ENST00000448116 IGHV1-69-2A0A0G2JMI3 117 aa10.31□□□□□ -0.76
SHC1-210ENST00000448116 CSN3P07498 182 aa10.31□□□□□ -0.76
SHC1-210ENST00000448116 MEGF9Q9H1U4 602 aa10.31□□□□□ -0.76
SHC1-210ENST00000448116 HIGD1AQ9Y241 93 aa10.31□□□□□ -0.76
SHC1-210ENST00000448116 S4R3C0 116 aa10.31□□□□□ -0.76
SHC1-210ENST00000448116 E7EQL1 145 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 CHEK1O14757 476 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 TCRAP04437 139 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 PSG1P11464 419 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 MYCNOSP40205 109 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 ZNF138P52744 262 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 MRGPRG-AS1Q2M3A8 158 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 OCIAD2Q56VL3 154 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 RASL11AQ6T310 242 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 Q71RC1 249 aaPredicted RBP10.3□□□□□ -0.76
SHC1-210ENST00000448116 ASCL5Q7RTU5 278 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 GTSF1Q8WW33 167 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 TRGV9Q99603 122 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 TPPP3Q9BW30 176 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 SIGLEC9Q9Y336 463 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 KALRNO60229 2985 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 C7orf69Q9H7B7 122 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 WNK2Q9Y3S1 2297 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 TLN1Q9Y490 2541 aaKnown RBP10.3□□□□□ -0.76
SHC1-210ENST00000448116 DLX6P56179 175 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 MRPL52Q86TS9 123 aaKnown RBP10.3□□□□□ -0.76
SHC1-210ENST00000448116 PPP1R27Q86WC6 154 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 TEX45Q8NA69 505 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 RPEQ96AT9 228 aa10.3□□□□□ -0.76
SHC1-210ENST00000448116 MCRIP2Q9BUT9 160 aaKnown RBP10.3□□□□□ -0.76
SHC1-210ENST00000448116 IGHV2-26A0A0B4J1V2 119 aa10.29□□□□□ -0.76
SHC1-210ENST00000448116 TACC2O95359 2948 aa10.29□□□□□ -0.76
SHC1-210ENST00000448116 PRR30Q53SZ7 412 aaPredicted RBP10.29□□□□□ -0.76
SHC1-210ENST00000448116 ATP5J2P56134 94 aa10.29□□□□□ -0.76
SHC1-210ENST00000448116 LINC00173Q6ZV60 143 aa10.29□□□□□ -0.76
SHC1-210ENST00000448116 C8orf46Q8TAG6 207 aa10.29□□□□□ -0.76
SHC1-210ENST00000448116 TP73-AS1Q9UF72 201 aa10.29□□□□□ -0.76
SHC1-210ENST00000448116 A0A1W2PRD5 423 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 A0A1W2PRF3 423 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 A0A1W2PRM7 423 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 CRYGCP07315 174 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 GP9P14770 177 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 IGLL1P15814 213 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 FAM71F2Q6NXP2 309 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 IGHV1-3A0A0C4DH29 117 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 TOMM40O96008 361 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 TSPOP30536 169 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 TMEM116Q8NCL8 245 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 FMC1Q96HJ9 113 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 RALYQ9UKM9 306 aaKnown RBP10.28□□□□□ -0.76
SHC1-210ENST00000448116 TRAV9-2A0A087WT02 112 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 OR2J3O76001 311 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 SRSF12Q8WXF0 261 aaKnown RBP10.28□□□□□ -0.76
SHC1-210ENST00000448116 MLST8Q9BVC4 326 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 CST9LQ9H4G1 147 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 KLF12Q9Y4X4 402 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 CEP295Q9C0D2 2601 aa10.28□□□□□ -0.76
SHC1-210ENST00000448116 A0A1B0GXF2 115 aa10.27□□□□□ -0.76
SHC1-210ENST00000448116 TNFRSF13BO14836 293 aaPredicted RBP10.27□□□□□ -0.76
SHC1-210ENST00000448116 KLF5Q13887 457 aaPredicted RBP10.27□□□□□ -0.76
SHC1-210ENST00000448116 ATP5L2Q7Z4Y8 100 aa10.27□□□□□ -0.76
SHC1-210ENST00000448116 SPATA12Q7Z6I5 190 aa10.27□□□□□ -0.76
SHC1-210ENST00000448116 OR8B3Q8NGG8 313 aa10.27□□□□□ -0.76
SHC1-210ENST00000448116 C17orf77Q96MU5 243 aa10.27□□□□□ -0.76
SHC1-210ENST00000448116 NGBQ9NPG2 151 aa10.27□□□□□ -0.76
SHC1-210ENST00000448116 F11RQ9Y624 299 aaKnown RBP10.27□□□□□ -0.76
SHC1-210ENST00000448116 ZNF292O60281 2723 aa10.27□□□□□ -0.76
SHC1-210ENST00000448116 ARHGAP32A7KAX9 2087 aa10.27□□□□□ -0.77
SHC1-210ENST00000448116 UNQ5815/PRO19632Q6UWF5 114 aa10.27□□□□□ -0.77
SHC1-210ENST00000448116 RBPMS2Q6ZRY4 209 aaKnown RBP10.27□□□□□ -0.77
SHC1-210ENST00000448116 URB1-AS1Q96HZ7 61 aa10.27□□□□□ -0.77
SHC1-210ENST00000448116 TMEM70Q9BUB7 260 aa10.27□□□□□ -0.77
SHC1-210ENST00000448116 SLC25A39Q9BZJ4 359 aaPredicted RBP10.27□□□□□ -0.77
SHC1-210ENST00000448116 ONECUT1Q9UBC0 465 aa10.27□□□□□ -0.77
SHC1-210ENST00000448116 CACNA1BQ00975 2339 aa10.27□□□□□ -0.77
SHC1-210ENST00000448116 A4D1N5 150 aa10.27□□□□□ -0.77
SHC1-210ENST00000448116 C2orf70A6NJV1 201 aa10.27□□□□□ -0.77
SHC1-210ENST00000448116 HILPDAQ9Y5L2 63 aa10.27□□□□□ -0.77
SHC1-210ENST00000448116 PPIAL4CA0A0B4J2A2 164 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 OR4C46A6NHA9 309 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 SHISA9B4DS77 424 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 LTAP01374 205 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 PPIAL4GP0DN37 164 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 KLF17Q5JT82 389 aaPredicted RBP10.26□□□□□ -0.77
SHC1-210ENST00000448116 BUB1B-PAK6H3BSN5 160 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 LEPROTL1O95214 131 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 C8orf31Q8N9H6 132 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 LINC01560Q8TB33 94 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 PMCHL2Q9BQD1 86 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 SAP30O75446 220 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 IGLC1P0CG04 106 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 HTR1DP28221 377 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 RAB9AP51151 201 aa10.26□□□□□ -0.77
SHC1-210ENST00000448116 UBE2V1Q13404 147 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms