RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 H0YGG7 62 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 M0R135 149 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 TNFSF11O14788 317 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 SYNGR1O43759 233 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 APOMO95445 188 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 TMEM50AO95807 157 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 CT45A10P0DMU9 189 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 PSG2P11465 335 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 GDF1P27539 372 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 GCHFRP30047 84 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 HBBP68871 147 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 PLGLB1Q02325 96 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 CEACAM16Q2WEN9 425 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 C15orf32Q32M92 178 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 DMRTC1Q5HYR2 192 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 CXCL17Q6UXB2 119 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 Q6ZS92 163 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 Q6ZSR3 168 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 Q6ZSR6 202 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 FAM231DQ6ZW35 169 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 TPRX1Q8N7U7 411 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR2M3Q8NG83 312 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR10G6Q8NH81 332 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR9G1Q8NH87 305 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 ZNF721Q8TF20 911 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 RDH5Q92781 318 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 CLDN23Q96B33 292 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 ZNF799Q96GE5 643 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 TNFRSF19Q9NS68 423 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 MTCH1Q9NZJ7 389 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 V9GYV3 84 aa3.36□□□□□ -1.87
HMGB1P16-201ENST00000447155 MYO7BQ6PIF6 2116 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 GOLGA4Q13439 2230 aaKnown RBP3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 A0A1B0GX78 115 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 C2orf70A6NJV1 201 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 TMEM262E9PQX1 116 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 K7EQS6 105 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 PGLYRP1O75594 196 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 NAPSAO96009 420 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 IGKV1D-33P01593 117 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 IGKV1-33P01594 117 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 SMIM13P0DJ93 91 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 CCL2P13500 99 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 HLA-DRB4P13762 266 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 G6PCP35575 357 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 LMO4P61968 165 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 RPS21P63220 83 aaKnown RBP3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 TFF3Q07654 80 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 KRTAP27-1Q3LI81 207 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 SPATA46Q5T0L3 261 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 LINC01545Q5VT33 79 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 ZFAND6Q6FIF0 208 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 MKXQ8IYA7 352 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 FAM19A2Q8N3H0 131 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR4A5Q8NH83 315 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 C19orf24Q9BVV8 132 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 SPANXDQ9BXN6 97 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 MRPL32Q9BYC8 188 aaKnown RBP3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 UBE2ZQ9H832 354 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 WDR54Q9H977 334 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 HES4Q9HCC6 221 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 OR1A1Q9P1Q5 309 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 HLA-DRB4X5D2U9 266 aa3.35□□□□□ -1.87
HMGB1P16-201ENST00000447155 NCOA6Q14686 2063 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 TRBV20OR9-2A0A075B6H5 130 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 TRBV6-6A0A0A6YYG2 114 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 IGKV3D-20A0A0C4DH25 116 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 IGHV1-24A0A0C4DH33 117 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 A0A1W2PRE2 83 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 ZNF716A6NP11 495 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 FNDC10F2Z333 226 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 KLF7O75840 302 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 CNIH1O95406 144 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 SPINK8P0C7L1 97 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 P2RY2P41231 377 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 UQCRFS1P47985 274 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 FGF12P61328 243 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 PCBD1P61457 104 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 ZNF77Q15935 545 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 IGFBP7Q16270 282 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 TNXAQ16473 311 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 Q1RN00 199 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 PIGYQ3MUY2 71 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 C10orf128Q5T292 105 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 LCN12Q6JVE5 192 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 EBLN2Q6P2I7 272 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 SSX8Q7RTT4 187 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 PRSS41Q7RTY9 318 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 H2BFWTQ7Z2G1 175 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 SPATA12Q7Z6I5 190 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 TMEM25Q86YD3 366 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 DOLPP1Q86YN1 238 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 TEX29Q8N6K0 151 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 FADS6Q8N9I5 356 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 TMEM54Q969K7 222 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 FAM131CQ96AQ9 280 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 SH2D2AQ9NP31 389 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 FAM60AQ9NP50 221 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms