RNA–Protein interactions for RNA: ENST00000446425.2

UBXN2A-203, Transcript of UBX domain protein 2A, humanhuman

TSL 1 (best)

Gene UBXN2A, Length 2,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-203ENST00000446425 D6R8Y8 96 aa13.47□□□□□ -0.25
UBXN2A-203ENST00000446425 DUX4L9Q6RFH8 374 aaPredicted RBP13.47□□□□□ -0.25
UBXN2A-203ENST00000446425 PRELID3AQ96N28 172 aa13.47□□□□□ -0.25
UBXN2A-203ENST00000446425 F11RQ9Y624 299 aaKnown RBP13.47□□□□□ -0.25
UBXN2A-203ENST00000446425 ZNF207O43670 478 aaKnown RBP13.46□□□□□ -0.25
UBXN2A-203ENST00000446425 GCSHP23434 173 aa13.46□□□□□ -0.25
UBXN2A-203ENST00000446425 C10orf55Q5SWW7 151 aa13.46□□□□□ -0.25
UBXN2A-203ENST00000446425 FAM201AQ5SY85 155 aa13.46□□□□□ -0.25
UBXN2A-203ENST00000446425 SPATA25Q9BR10 227 aa13.46□□□□□ -0.25
UBXN2A-203ENST00000446425 SPRY4Q9C004 299 aa13.46□□□□□ -0.25
UBXN2A-203ENST00000446425 TMEM14CQ9P0S9 112 aa13.46□□□□□ -0.25
UBXN2A-203ENST00000446425 KNTC1P50748 2209 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 PVRIGQ6DKI7 326 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 ORMDL3Q8N138 153 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 OR4C13Q8NGP0 309 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 PHLDA1Q8WV24 401 aaPredicted RBP13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 SPANXB1Q9NS25 103 aaPredicted RBP13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 SERTM2A0A1B0GWG4 89 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 FXYD2P54710 66 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 MSMPQ1L6U9 139 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 TMEM164Q5U3C3 297 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 FAM104BQ5XKR9 115 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 RUSC1-AS1Q66K80 236 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 CNEP1R1Q8N9A8 125 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 TMEM75Q8N9X5 138 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 GAFA1Q96PS6 74 aa13.45□□□□□ -0.26
UBXN2A-203ENST00000446425 NDUFS7O75251 213 aa13.44□□□□□ -0.26
UBXN2A-203ENST00000446425 Q71RC1 249 aaPredicted RBP13.44□□□□□ -0.26
UBXN2A-203ENST00000446425 EXOC3-AS1Q8N2X6 119 aa13.44□□□□□ -0.26
UBXN2A-203ENST00000446425 HIGD1AQ9Y241 93 aa13.44□□□□□ -0.26
UBXN2A-203ENST00000446425 PRR14LQ5THK1 2151 aa13.44□□□□□ -0.26
UBXN2A-203ENST00000446425 COL6A3P12111 3177 aa13.44□□□□□ -0.26
UBXN2A-203ENST00000446425 SHISA9B4DS77 424 aa13.44□□□□□ -0.26
UBXN2A-203ENST00000446425 TM4SF20Q53R12 229 aa13.44□□□□□ -0.26
UBXN2A-203ENST00000446425 S100A7AQ86SG5 101 aa13.44□□□□□ -0.26
UBXN2A-203ENST00000446425 DKK4Q9UBT3 224 aa13.44□□□□□ -0.26
UBXN2A-203ENST00000446425 NBEAQ8NFP9 2946 aa13.43□□□□□ -0.26
UBXN2A-203ENST00000446425 A0A1W2PPI3 338 aa13.43□□□□□ -0.26
UBXN2A-203ENST00000446425 RNF7Q9UBF6 113 aa13.43□□□□□ -0.26
UBXN2A-203ENST00000446425 DKK2Q9UBU2 259 aa13.43□□□□□ -0.26
UBXN2A-203ENST00000446425 HEATR1Q9H583 2144 aaKnown RBP13.43□□□□□ -0.26
UBXN2A-203ENST00000446425 E9PLD3 99 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 SPRY3O43610 288 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 IGLV2-23P01705 113 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 KIR2DL2P43627 348 aaPredicted RBP13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 CCDC144NLQ6NUI1 221 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 A0A1W2PRD5 423 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 A0A1W2PRF3 423 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 A0A1W2PRM7 423 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 WFDC2Q14508 124 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 ZNF788Q6ZQV5 615 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 C18orf15Q96N68 181 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 CCL13Q99616 98 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 CHAC1Q9BUX1 264 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 TPPP3Q9BW30 176 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 TM2D2Q9BX73 214 aa13.42□□□□□ -0.26
UBXN2A-203ENST00000446425 RAI1Q7Z5J4 1906 aaPredicted RBP13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 PRUNE2Q8WUY3 3088 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 COL27A1Q8IZC6 1860 aaPredicted RBP13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 K7EQM0 130 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 TNFRSF1AP19438 455 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 GATA4P43694 442 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 CRIP1P50238 77 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 FXYD7P58549 80 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 ZNF576Q9H609 170 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 ZMAT4Q9H898 229 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 PSG8Q9UQ74 426 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 CEP290O15078 2479 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 VSTM5A8MXK1 200 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 RAB9AP51151 201 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 CKS1BP61024 79 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 SCGB2A2Q13296 93 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 MRPL51Q4U2R6 128 aaKnown RBP13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 TCTEX1D4Q5JR98 221 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 PEAR1Q5VY43 1037 aaPredicted RBP13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 AMN1Q8IY45 258 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 ZNF71Q9NQZ8 489 aaPredicted RBP13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 LINC00312Q9Y6C7 94 aa13.41□□□□□ -0.26
UBXN2A-203ENST00000446425 WI2-2373I1.2A0A1W2PRP0 233 aa13.4□□□□□ -0.26
UBXN2A-203ENST00000446425 FBLL1A6NHQ2 334 aaKnown RBP13.4□□□□□ -0.26
UBXN2A-203ENST00000446425 PRSS47A8MTI9 375 aa13.4□□□□□ -0.26
UBXN2A-203ENST00000446425 K7ERJ3 54 aa13.4□□□□□ -0.26
UBXN2A-203ENST00000446425 SRSF1Q07955 248 aaKnown RBP eCLIP13.4□□□□□ -0.265e-8■■■■□ 25.6
UBXN2A-203ENST00000446425 HCP5Q6MZN7 132 aa13.4□□□□□ -0.26
UBXN2A-203ENST00000446425 FAM216BQ8N7L0 139 aa13.4□□□□□ -0.26
UBXN2A-203ENST00000446425 FAM169BQ8N8A8 192 aa13.4□□□□□ -0.26
UBXN2A-203ENST00000446425 DEFB108BQ8NET1 73 aa13.4□□□□□ -0.26
UBXN2A-203ENST00000446425 SLC25A39Q9BZJ4 359 aaPredicted RBP13.4□□□□□ -0.26
UBXN2A-203ENST00000446425 SH3BGRL2Q9UJC5 107 aa13.4□□□□□ -0.26
UBXN2A-203ENST00000446425 NAV3Q8IVL0 2385 aa13.4□□□□□ -0.26
UBXN2A-203ENST00000446425 MED13Q9UHV7 2174 aa13.4□□□□□ -0.26
UBXN2A-203ENST00000446425 PATE3B3GLJ2 98 aa13.39□□□□□ -0.27
UBXN2A-203ENST00000446425 THBDP07204 575 aa13.39□□□□□ -0.27
UBXN2A-203ENST00000446425 VMA21Q3ZAQ7 101 aa13.39□□□□□ -0.27
UBXN2A-203ENST00000446425 LYZL1Q6UWQ5 148 aa13.39□□□□□ -0.27
UBXN2A-203ENST00000446425 CEND1Q8N111 149 aa13.39□□□□□ -0.27
UBXN2A-203ENST00000446425 RITA1Q96K30 269 aa13.39□□□□□ -0.27
UBXN2A-203ENST00000446425 SPAG8Q99932 426 aaPredicted RBP13.39□□□□□ -0.27
UBXN2A-203ENST00000446425 IGKV2D-26A0A0A0MRZ7 120 aa13.39□□□□□ -0.27
UBXN2A-203ENST00000446425 PRR33A8MZF0 331 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms