RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 EIF3GO75821 320 aaKnown RBP eCLIP13.16□□□□□ -0.3
SGCE-206ENST00000445866 INSL3P51460 131 aa13.16□□□□□ -0.3
SGCE-206ENST00000445866 ALKAL2Q6UX46 152 aa13.16□□□□□ -0.3
SGCE-206ENST00000445866 TCF24Q7RTU0 167 aa13.16□□□□□ -0.3
SGCE-206ENST00000445866 PHYHIPLQ96FC7 376 aa13.16□□□□□ -0.3
SGCE-206ENST00000445866 MRPL32Q9BYC8 188 aaKnown RBP13.16□□□□□ -0.3
SGCE-206ENST00000445866 CD300EQ496F6 205 aaPredicted RBP13.15□□□□□ -0.3
SGCE-206ENST00000445866 RBPMS2Q6ZRY4 209 aaKnown RBP13.15□□□□□ -0.3
SGCE-206ENST00000445866 RAB24Q969Q5 203 aa13.15□□□□□ -0.3
SGCE-206ENST00000445866 IGKV3-7A0A075B6H7 116 aa13.15□□□□□ -0.31
SGCE-206ENST00000445866 HELTA6NFD8 242 aa13.15□□□□□ -0.31
SGCE-206ENST00000445866 HMGB3O15347 200 aaKnown RBP13.15□□□□□ -0.31
SGCE-206ENST00000445866 CD5P06127 495 aa13.15□□□□□ -0.31
SGCE-206ENST00000445866 CDC34P49427 236 aaPredicted RBP13.15□□□□□ -0.31
SGCE-206ENST00000445866 FHITP49789 147 aa13.15□□□□□ -0.31
SGCE-206ENST00000445866 FAM213BQ8TBF2 198 aa13.15□□□□□ -0.31
SGCE-206ENST00000445866 GLMPQ8WWB7 406 aa13.15□□□□□ -0.31
SGCE-206ENST00000445866 ZNF785A8K8V0 405 aa13.14□□□□□ -0.31
SGCE-206ENST00000445866 IGLV1-51P01701 117 aa13.14□□□□□ -0.31
SGCE-206ENST00000445866 RPL7P18124 248 aaKnown RBP13.14□□□□□ -0.31
SGCE-206ENST00000445866 GALR1P47211 349 aa13.14□□□□□ -0.31
SGCE-206ENST00000445866 RAB5CP51148 216 aa13.14□□□□□ -0.31
SGCE-206ENST00000445866 TAS2R45P59539 299 aa13.14□□□□□ -0.31
SGCE-206ENST00000445866 FAM74A1Q5RGS3 127 aa13.14□□□□□ -0.31
SGCE-206ENST00000445866 SIGLEC15Q6ZMC9 328 aa13.14□□□□□ -0.31
SGCE-206ENST00000445866 BPIFA4PQ86YQ2 179 aa13.14□□□□□ -0.31
SGCE-206ENST00000445866 GPR82Q96P67 336 aa13.14□□□□□ -0.31
SGCE-206ENST00000445866 SULT1A2P50226 295 aa13.13□□□□□ -0.31
SGCE-206ENST00000445866 FAM90A2PQ658T7 463 aa13.13□□□□□ -0.31
SGCE-206ENST00000445866 TEX261Q6UWH6 196 aa13.13□□□□□ -0.31
SGCE-206ENST00000445866 GBGT1Q8N5D6 347 aa13.13□□□□□ -0.31
SGCE-206ENST00000445866 FAM167A-AS1Q96KT0 104 aa13.13□□□□□ -0.31
SGCE-206ENST00000445866 SLC25A2Q9BXI2 301 aa13.13□□□□□ -0.31
SGCE-206ENST00000445866 DNHD1Q96M86 4753 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 SNRPCP09234 159 aaKnown RBP13.12□□□□□ -0.31
SGCE-206ENST00000445866 ZNF726P1Q15940 193 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 OXLD1Q5BKU9 147 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 DPPA3Q6W0C5 159 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 GPR61Q9BZJ8 451 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 OR51M1Q9H341 326 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 SMAD5-AS1Q9Y6J3 95 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 IZUMO1RA6ND01 250 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 DNASE2O00115 360 aaPredicted RBP13.12□□□□□ -0.31
SGCE-206ENST00000445866 OR7C2O60412 319 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 PAFAH1B2P68402 229 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 LCN15Q6UWW0 184 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 WFDC3Q8IUB2 231 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 TMEM61Q8N0U2 210 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 ZNF680Q8NEM1 530 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 STXBP6Q8NFX7 210 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 PAXXQ9BUH6 204 aa13.12□□□□□ -0.31
SGCE-206ENST00000445866 TRAV25A0A0B4J276 109 aa13.11□□□□□ -0.31
SGCE-206ENST00000445866 CTXND1A0A1B0GTU2 59 aa13.11□□□□□ -0.31
SGCE-206ENST00000445866 ATF4P18848 351 aaPredicted RBP13.11□□□□□ -0.31
SGCE-206ENST00000445866 TFPI2P48307 235 aa13.11□□□□□ -0.31
SGCE-206ENST00000445866 GUCA2BQ16661 112 aa13.11□□□□□ -0.31
SGCE-206ENST00000445866 KHDC3LQ587J8 217 aa13.11□□□□□ -0.31
SGCE-206ENST00000445866 OR2K2Q8NGT1 345 aa13.11□□□□□ -0.31
SGCE-206ENST00000445866 SFT2D1Q8WV19 159 aa13.11□□□□□ -0.31
SGCE-206ENST00000445866 RNF141Q8WVD5 230 aa13.11□□□□□ -0.31
SGCE-206ENST00000445866 TMEM14CQ9P0S9 112 aa13.11□□□□□ -0.31
SGCE-206ENST00000445866 ZNF705EA8MWA4 302 aaPredicted RBP13.1□□□□□ -0.31
SGCE-206ENST00000445866 TSPAN4O14817 238 aa13.1□□□□□ -0.31
SGCE-206ENST00000445866 IFNA7P01567 189 aa13.1□□□□□ -0.31
SGCE-206ENST00000445866 H2AFB1P0C5Y9 115 aa13.1□□□□□ -0.31
SGCE-206ENST00000445866 PYYP10082 97 aa13.1□□□□□ -0.31
SGCE-206ENST00000445866 SSX7Q7RTT5 188 aa13.1□□□□□ -0.31
SGCE-206ENST00000445866 MS4A6AQ9H2W1 248 aa13.1□□□□□ -0.31
SGCE-206ENST00000445866 MRPS12O15235 138 aaKnown RBP13.09□□□□□ -0.31
SGCE-206ENST00000445866 STAG3L2P0CL84 134 aa13.09□□□□□ -0.31
SGCE-206ENST00000445866 STAG3L3P0CL85 134 aa13.09□□□□□ -0.31
SGCE-206ENST00000445866 LCN12Q6JVE5 192 aa13.09□□□□□ -0.31
SGCE-206ENST00000445866 PQLC2Q6ZP29 291 aa13.09□□□□□ -0.31
SGCE-206ENST00000445866 LRRC20Q8TCA0 184 aa13.09□□□□□ -0.31
SGCE-206ENST00000445866 NOTCH3Q9UM47 2321 aa13.09□□□□□ -0.31
SGCE-206ENST00000445866 H3BQ15 152 aa13.08□□□□□ -0.31
SGCE-206ENST00000445866 H3BTX0 84 aa13.08□□□□□ -0.31
SGCE-206ENST00000445866 CXorf1O96002 111 aa13.08□□□□□ -0.31
SGCE-206ENST00000445866 OR10J4P0C629 311 aa13.08□□□□□ -0.31
SGCE-206ENST00000445866 ARL14EPLP0DKL9 152 aa13.08□□□□□ -0.31
SGCE-206ENST00000445866 HIST1H1EP10412 219 aaKnown RBP13.08□□□□□ -0.31
SGCE-206ENST00000445866 GP9P14770 177 aa13.08□□□□□ -0.31
SGCE-206ENST00000445866 FGF8P55075 233 aaPredicted RBP13.08□□□□□ -0.31
SGCE-206ENST00000445866 IQCF2Q8IXL9 164 aa13.08□□□□□ -0.31
SGCE-206ENST00000445866 MBD3L1Q8WWY6 194 aa13.08□□□□□ -0.31
SGCE-206ENST00000445866 ZNF503Q96F45 646 aa13.08□□□□□ -0.31
SGCE-206ENST00000445866 C17orf77Q96MU5 243 aa13.08□□□□□ -0.31
SGCE-206ENST00000445866 HRH4Q9H3N8 390 aa13.08□□□□□ -0.31
SGCE-206ENST00000445866 NRN1Q9NPD7 142 aa13.08□□□□□ -0.31
SGCE-206ENST00000445866 MAP1LC3B2A6NCE7 125 aa13.08□□□□□ -0.32
SGCE-206ENST00000445866 NBEAP1P0C6P0 100 aa13.08□□□□□ -0.32
SGCE-206ENST00000445866 BLNKQ8WV28 456 aa13.08□□□□□ -0.32
SGCE-206ENST00000445866 MAP1LC3BQ9GZQ8 125 aa13.08□□□□□ -0.32
SGCE-206ENST00000445866 PKD1L1Q8TDX9 2849 aa13.07□□□□□ -0.32
SGCE-206ENST00000445866 A0A1B0GV50 99 aa13.07□□□□□ -0.32
SGCE-206ENST00000445866 IGLC2P0DOY2 106 aa13.07□□□□□ -0.32
SGCE-206ENST00000445866 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.07□□□□□ -0.32
SGCE-206ENST00000445866 SPAG8Q99932 426 aaPredicted RBP13.07□□□□□ -0.32
SGCE-206ENST00000445866 ZNF586Q9NXT0 402 aa13.07□□□□□ -0.32
SGCE-206ENST00000445866 UBQLN2Q9UHD9 624 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms