RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 TCRAP04437 139 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 MLANAQ16655 118 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 C1QTNF4Q9BXJ3 329 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 A0A1W2PRD5 423 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 A0A1W2PRF3 423 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 A0A1W2PRM7 423 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 H3BMG7 143 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 ATP5G2Q06055 141 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 GTSF1Q8WW33 167 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 COLQQ9Y215 455 aaPredicted RBP4.07□□□□□ -1.76
HERC1-201ENST00000443617 ZNF462Q96JM2 2506 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 MT-ATP8P03928 68 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 SAA2P0DJI9 122 aaPredicted RBP4.07□□□□□ -1.76
HERC1-201ENST00000443617 ZCCHC24Q8N2G6 241 aaKnown RBP4.07□□□□□ -1.76
HERC1-201ENST00000443617 IGHV1OR15-9A0A0B4J2B8 117 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 A6NJY4 79 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 NDUFA3O95167 84 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 CD69Q07108 199 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 MBNL2Q5VZF2 373 aaKnown RBP4.07□□□□□ -1.76
HERC1-201ENST00000443617 GCSAMQ8N6F7 178 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 PLGLAQ15195 96 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 LINC01559Q495D7 138 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 LINC00696Q6ZRV3 163 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 CIARTQ8N365 385 aaPredicted RBP4.07□□□□□ -1.76
HERC1-201ENST00000443617 FXYD5Q96DB9 178 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 MRPL20Q9BYC9 149 aaKnown RBP4.07□□□□□ -1.76
HERC1-201ENST00000443617 ORM1P02763 201 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 GAGE5Q13069 117 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 GAGE6Q13070 117 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 C18orf15Q96N68 181 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 TRGV9Q99603 122 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 AKIRIN1Q9H9L7 192 aaPredicted RBP4.07□□□□□ -1.76
HERC1-201ENST00000443617 C8orf86Q6ZUL3 223 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 GTSCR1Q86UQ5 136 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 ITLN1Q8WWA0 313 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 KLF12Q9Y4X4 402 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 LOC102723996A0A087X1L8 192 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 PPIFP30405 207 aaKnown RBP4.07□□□□□ -1.76
HERC1-201ENST00000443617 FXYD2P54710 66 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 C5orf64Q2M2E5 130 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 MOB3BQ86TA1 216 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 CEND1Q8N111 149 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 COQ2Q96H96 371 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 IGKCP01834 107 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 Q8N7P7 452 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 RNF183Q96D59 192 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 TMEM8BA6NDV4 472 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 RBP4P02753 201 aa4.07□□□□□ -1.76
HERC1-201ENST00000443617 HOXA4Q00056 320 aaPredicted RBP4.07□□□□□ -1.76
HERC1-201ENST00000443617 SPAG8Q99932 426 aaPredicted RBP4.07□□□□□ -1.76
HERC1-201ENST00000443617 SCGB2A1O75556 95 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 FAM90A1Q86YD7 464 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 RNASE2P10153 161 aaKnown RBP4.06□□□□□ -1.76
HERC1-201ENST00000443617 LGALS9BQ3B8N2 356 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 LGALS9CQ6DKI2 356 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 MOGAT3Q86VF5 341 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 A8MWV9 139 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 CELA3AP09093 270 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 FXYD7P58549 80 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 AAMDCQ9H7C9 122 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 JPT1Q9UK76 154 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 CNIH1O95406 144 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 MNX1P50219 401 aaPredicted RBP4.06□□□□□ -1.76
HERC1-201ENST00000443617 CRISPLD2Q9H0B8 497 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 MAP1LC3AQ9H492 121 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 PRSS46E5RG02 174 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 FAM104BQ5XKR9 115 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 FSCN3Q9NQT6 498 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 IQCF6A8MYZ5 107 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 K7ESF4 209 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 DKK2Q9UBU2 259 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 NPIPB5A8MRT5 1133 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 MYOD1P15172 320 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 RND1Q92730 232 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 HARBI1Q96MB7 349 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 IGHV3-21A0A0B4J1V1 117 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 SRSF1Q07955 248 aaKnown RBP eCLIP4.06□□□□□ -1.766e-7■□□□□ 10.2
HERC1-201ENST00000443617 ABHD17AQ96GS6 310 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 SAA1P0DJI8 122 aaPredicted RBP4.06□□□□□ -1.76
HERC1-201ENST00000443617 SCGB1D4Q6XE38 83 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 C1orf159Q96HA4 380 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 KLK10O43240 276 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 U3KQK5 164 aa4.06□□□□□ -1.76
HERC1-201ENST00000443617 EML6Q6ZMW3 1958 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 SPRY3O43610 288 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 PEAR1Q5VY43 1037 aaPredicted RBP4.05□□□□□ -1.76
HERC1-201ENST00000443617 ZNF562Q6V9R5 426 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 CD177Q8N6Q3 437 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 SYT8Q8NBV8 401 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 C8orf46Q8TAG6 207 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 SRSF6Q13247 344 aaKnown RBP4.05□□□□□ -1.76
HERC1-201ENST00000443617 WDR86Q86TI4 376 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 SCNM1Q9BWG6 230 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 DEFB127Q9H1M4 99 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 TANC2Q9HCD6 1990 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 ZNF134P52741 427 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 NXT2Q9NPJ8 142 aaKnown RBP4.05□□□□□ -1.76
HERC1-201ENST00000443617 FOXG1P55316 489 aaPredicted RBP4.05□□□□□ -1.76
HERC1-201ENST00000443617 TM2D2Q9BX73 214 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 FN1P02751 2386 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms