RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 MRPL27Q9P0M9 148 aaKnown RBP12.78□□□□□ -0.36
NLE1-202ENST00000442241 ITPR1Q14643 2758 aa12.78□□□□□ -0.36
NLE1-202ENST00000442241 SMIM27A0A1W2PRY6 76 aa12.77□□□□□ -0.36
NLE1-202ENST00000442241 ATOH7Q8N100 152 aa12.77□□□□□ -0.36
NLE1-202ENST00000442241 CRYGCP07315 174 aa12.77□□□□□ -0.37
NLE1-202ENST00000442241 NBEAP1P0C6P0 100 aa12.77□□□□□ -0.37
NLE1-202ENST00000442241 CAMPP49913 170 aa12.77□□□□□ -0.37
NLE1-202ENST00000442241 SLAQ13239 276 aa12.77□□□□□ -0.37
NLE1-202ENST00000442241 BCL6BQ8N143 479 aaPredicted RBP12.77□□□□□ -0.37
NLE1-202ENST00000442241 EXOC3-AS1Q8N2X6 119 aa12.77□□□□□ -0.37
NLE1-202ENST00000442241 BORCS7Q96B45 105 aa12.77□□□□□ -0.37
NLE1-202ENST00000442241 PERPQ96FX8 193 aa12.77□□□□□ -0.37
NLE1-202ENST00000442241 F11RQ9Y624 299 aaKnown RBP12.77□□□□□ -0.37
NLE1-202ENST00000442241 UBE2G1P62253 170 aa12.76□□□□□ -0.37
NLE1-202ENST00000442241 GDF5OSQ5U4N7 250 aa12.76□□□□□ -0.37
NLE1-202ENST00000442241 LCN12Q6JVE5 192 aa12.76□□□□□ -0.37
NLE1-202ENST00000442241 C18orf32Q8TCD1 76 aa12.76□□□□□ -0.37
NLE1-202ENST00000442241 C17orf77Q96MU5 243 aa12.76□□□□□ -0.37
NLE1-202ENST00000442241 HIVEP3Q5T1R4 2406 aa12.76□□□□□ -0.37
NLE1-202ENST00000442241 IGHV3-23P01764 117 aa12.76□□□□□ -0.37
NLE1-202ENST00000442241 TCF24Q7RTU0 167 aa12.76□□□□□ -0.37
NLE1-202ENST00000442241 EPDR1Q9UM22 224 aa12.76□□□□□ -0.37
NLE1-202ENST00000442241 TRAV9-2A0A087WT02 112 aa12.76□□□□□ -0.37
NLE1-202ENST00000442241 VWC2LB2RUY7 222 aa12.75□□□□□ -0.37
NLE1-202ENST00000442241 APCSP02743 223 aa12.75□□□□□ -0.37
NLE1-202ENST00000442241 NTF3P20783 257 aa12.75□□□□□ -0.37
NLE1-202ENST00000442241 LY6DQ14210 128 aa12.75□□□□□ -0.37
NLE1-202ENST00000442241 ETFRF1Q6IPR1 90 aa12.75□□□□□ -0.37
NLE1-202ENST00000442241 TMEM116Q8NCL8 245 aa12.75□□□□□ -0.37
NLE1-202ENST00000442241 NUP35Q8NFH5 326 aa12.75□□□□□ -0.37
NLE1-202ENST00000442241 TRGV9Q99603 122 aa12.75□□□□□ -0.37
NLE1-202ENST00000442241 Q9H3A6 140 aa12.75□□□□□ -0.37
NLE1-202ENST00000442241 MSRB2Q9Y3D2 182 aa12.75□□□□□ -0.37
NLE1-202ENST00000442241 A0A1W2PPR1 153 aa12.74□□□□□ -0.37
NLE1-202ENST00000442241 LIPFP07098 398 aa12.74□□□□□ -0.37
NLE1-202ENST00000442241 GP9P14770 177 aa12.74□□□□□ -0.37
NLE1-202ENST00000442241 DYNAPQ8N1N2 210 aa12.74□□□□□ -0.37
NLE1-202ENST00000442241 WIPF2Q8TF74 440 aaPredicted RBP12.74□□□□□ -0.37
NLE1-202ENST00000442241 LY6LH3BQJ8 138 aa12.74□□□□□ -0.37
NLE1-202ENST00000442241 IGLC1P0CG04 106 aa12.74□□□□□ -0.37
NLE1-202ENST00000442241 MYCNOSP40205 109 aa12.74□□□□□ -0.37
NLE1-202ENST00000442241 SSX8Q7RTT4 187 aa12.74□□□□□ -0.37
NLE1-202ENST00000442241 IGHV3OR16-8A0A075B7F1 116 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 IZUMO1RA6ND01 250 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 FAM181BA6NEQ2 426 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 HIGD1CA8MV81 97 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 I3L2K1 104 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 PPBPP02775 128 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 IGLL1P15814 213 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 EBLN2Q6P2I7 272 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 HIGD1AQ9Y241 93 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 HTR1DP28221 377 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 OR4C5Q8NGB2 326 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 TNFRSF14Q92956 283 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 RASL11BQ9BPW5 248 aa12.73□□□□□ -0.37
NLE1-202ENST00000442241 ZNF331Q9NQX6 463 aaPredicted RBP12.73□□□□□ -0.37
NLE1-202ENST00000442241 TRAV30A0A087WSZ9 112 aa12.72□□□□□ -0.37
NLE1-202ENST00000442241 RASL11AQ6T310 242 aa12.72□□□□□ -0.37
NLE1-202ENST00000442241 CIARTQ8N365 385 aaPredicted RBP12.72□□□□□ -0.37
NLE1-202ENST00000442241 C8orf46Q8TAG6 207 aa12.72□□□□□ -0.37
NLE1-202ENST00000442241 SLC25A39Q9BZJ4 359 aaPredicted RBP12.72□□□□□ -0.37
NLE1-202ENST00000442241 RAB1BQ9H0U4 201 aa12.72□□□□□ -0.37
NLE1-202ENST00000442241 C2orf70A6NJV1 201 aa12.72□□□□□ -0.37
NLE1-202ENST00000442241 NCBP2LA6PVI3 153 aaKnown RBP12.72□□□□□ -0.37
NLE1-202ENST00000442241 IGKV1-17P01599 117 aa12.72□□□□□ -0.37
NLE1-202ENST00000442241 RHOGP84095 191 aa12.71□□□□□ -0.37
NLE1-202ENST00000442241 KLRB1Q12918 225 aa12.71□□□□□ -0.37
NLE1-202ENST00000442241 IGHV3-35A0A0C4DH35 117 aa12.71□□□□□ -0.38
NLE1-202ENST00000442241 K7EIM0 57 aa12.71□□□□□ -0.38
NLE1-202ENST00000442241 KLF5Q13887 457 aaPredicted RBP12.71□□□□□ -0.38
NLE1-202ENST00000442241 GOLT1AQ6ZVE7 132 aa12.71□□□□□ -0.38
NLE1-202ENST00000442241 PRNTQ86SH4 94 aa12.71□□□□□ -0.38
NLE1-202ENST00000442241 MBD6Q96DN6 1003 aa12.71□□□□□ -0.38
NLE1-202ENST00000442241 C7orf69Q9H7B7 122 aa12.71□□□□□ -0.38
NLE1-202ENST00000442241 M0QZ24 198 aa12.7□□□□□ -0.38
NLE1-202ENST00000442241 Q56UQ5 140 aa12.7□□□□□ -0.38
NLE1-202ENST00000442241 PGLYRP4Q96LB8 373 aa12.7□□□□□ -0.38
NLE1-202ENST00000442241 DPM3Q9P2X0 92 aa12.7□□□□□ -0.38
NLE1-202ENST00000442241 NBR2O15453 112 aa12.7□□□□□ -0.38
NLE1-202ENST00000442241 HSBP1O75506 76 aa12.7□□□□□ -0.38
NLE1-202ENST00000442241 TCRAP04437 139 aa12.7□□□□□ -0.38
NLE1-202ENST00000442241 ZFP36P26651 326 aaKnown RBP12.7□□□□□ -0.38
NLE1-202ENST00000442241 RPS20P60866 119 aaKnown RBP12.7□□□□□ -0.38
NLE1-202ENST00000442241 PVRIGQ6DKI7 326 aa12.7□□□□□ -0.38
NLE1-202ENST00000442241 GRAMD2BQ96HH9 432 aa12.7□□□□□ -0.38
NLE1-202ENST00000442241 SPATA12Q7Z6I5 190 aa12.69□□□□□ -0.38
NLE1-202ENST00000442241 LY6G5BQ8NDX9 201 aa12.69□□□□□ -0.38
NLE1-202ENST00000442241 CFHR4Q92496 578 aa12.69□□□□□ -0.38
NLE1-202ENST00000442241 M0R2Z0 102 aa12.69□□□□□ -0.38
NLE1-202ENST00000442241 IL4P05112 153 aa12.69□□□□□ -0.38
NLE1-202ENST00000442241 FOXA3P55318 350 aaPredicted RBP12.69□□□□□ -0.38
NLE1-202ENST00000442241 NDPQ00604 133 aa12.69□□□□□ -0.38
NLE1-202ENST00000442241 FBXL19-AS1Q494R0 122 aa12.69□□□□□ -0.38
NLE1-202ENST00000442241 TIMD4Q96H15 378 aa12.69□□□□□ -0.38
NLE1-202ENST00000442241 GTSF1Q8WW33 167 aa12.68□□□□□ -0.38
NLE1-202ENST00000442241 GPR82Q96P67 336 aa12.68□□□□□ -0.38
NLE1-202ENST00000442241 FCGR2BP31994 310 aaPredicted RBP12.68□□□□□ -0.38
NLE1-202ENST00000442241 RNF151Q2KHN1 245 aa12.68□□□□□ -0.38
NLE1-202ENST00000442241 VMO1Q7Z5L0 202 aa12.68□□□□□ -0.38
NLE1-202ENST00000442241 SH2D7A6NKC9 451 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms