RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 GAGE12JA6NER3 117 aa11.27□□□□□ -0.6
LRCH3-206ENST00000438796 VWC2LB2RUY7 222 aa11.27□□□□□ -0.6
LRCH3-206ENST00000438796 LEPROTO15243 131 aa11.27□□□□□ -0.6
LRCH3-206ENST00000438796 GAGE1Q13065 139 aa11.27□□□□□ -0.6
LRCH3-206ENST00000438796 GAGE4Q13068 117 aa11.27□□□□□ -0.6
LRCH3-206ENST00000438796 GAGE5Q13069 117 aa11.27□□□□□ -0.6
LRCH3-206ENST00000438796 GAGE13Q4V321 117 aa11.27□□□□□ -0.6
LRCH3-206ENST00000438796 RHPN1-AS1Q9BWJ2 59 aa11.27□□□□□ -0.6
LRCH3-206ENST00000438796 A8MWV9 139 aa11.27□□□□□ -0.61
LRCH3-206ENST00000438796 MCRIP2Q9BUT9 160 aaKnown RBP11.27□□□□□ -0.61
LRCH3-206ENST00000438796 LGALS1P09382 135 aaKnown RBP11.27□□□□□ -0.61
LRCH3-206ENST00000438796 SAMD5Q5TGI4 173 aa11.27□□□□□ -0.61
LRCH3-206ENST00000438796 LINC00114Q6XXX2 140 aa11.27□□□□□ -0.61
LRCH3-206ENST00000438796 COL6A6A6NMZ7 2263 aa11.27□□□□□ -0.61
LRCH3-206ENST00000438796 TRAV8-1A0A0A6YYK1 113 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 HOXD3P31249 432 aaPredicted RBP11.26□□□□□ -0.61
LRCH3-206ENST00000438796 LINC00518Q8N0U6 118 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 SLC25A48Q6ZT89 311 aaKnown RBP11.26□□□□□ -0.61
LRCH3-206ENST00000438796 MINOS1Q5TGZ0 78 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 DLX4Q92988 240 aaPredicted RBP11.26□□□□□ -0.61
LRCH3-206ENST00000438796 TMEM126AQ9H061 195 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 MINOS1-NBL1R4GNA1 71 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 C5orf64Q2M2E5 130 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 OVOL3O00110 214 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 PSPNO60542 156 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 LAMTOR2Q9Y2Q5 125 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 RFNGQ9Y644 331 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 RNF222A6NCQ9 220 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 H0YJW9 148 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 SPINK13Q1W4C9 94 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 GAFA1Q96PS6 74 aa11.26□□□□□ -0.61
LRCH3-206ENST00000438796 TMEM238C9JI98 176 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 NTN3O00634 580 aaPredicted RBP11.25□□□□□ -0.61
LRCH3-206ENST00000438796 OCIAD2Q56VL3 154 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 EREGO14944 169 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 LAIR2Q6ISS4 152 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 TSKUQ8WUA8 353 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 C1QTNF4Q9BXJ3 329 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 IGLV3-12A0A075B6K2 115 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 ESDP10768 282 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 GBF1Q92538 1859 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 IGKV1-12A0A0C4DH73 117 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 IGKV1D-12P01611 117 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 ATRAIDQ6UW56 229 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 TICRRQ7Z2Z1 1910 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 PLXND1Q9Y4D7 1925 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 A6NNC1 897 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 TREML4Q6UXN2 200 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 TNFRSF14Q92956 283 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 OSTCQ9NRP0 149 aa11.25□□□□□ -0.61
LRCH3-206ENST00000438796 hDV102S1A0JD36 115 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 TRAV25A0A0B4J276 109 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 IGHV3-38A0A0C4DH36 116 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 PPBPP02775 128 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 PFN2P35080 140 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 NABP1Q96AH0 204 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 A0A1W2PRE2 83 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 IL18BPO95998 194 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 MLANAQ16655 118 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 PRIMA1Q86XR5 153 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 THAP8Q8NA92 274 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 ZNF479Q96JC4 524 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 GGTLC1Q9BX51 225 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 HGFACQ04756 655 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 TMEM170AQ8WVE7 144 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 IGKV1-27A0A075B6S5 117 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 GAGE12BA1L429 117 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 E7EQL1 145 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 GAGE7O76087 117 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 GAGE12FP0CL80 117 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 GAGE12GP0CL81 117 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 GAGE12IP0CL82 117 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 PAX9P55771 341 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 NKAPP1Q8N9T2 125 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 A0A1B0GWJ7 208 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 FAM223BA6NKX1 122 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 FAM223AQ8IWN6 122 aa11.24□□□□□ -0.61
LRCH3-206ENST00000438796 SPTBN1Q01082 2364 aaKnown RBP11.23□□□□□ -0.61
LRCH3-206ENST00000438796 TNFRSF6BO95407 300 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 TRAV9-1A0A075B6T8 112 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 GNB1LQ9BYB4 327 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 GAGE2AQ6NT46 116 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 HEPN1Q6WQI6 88 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 SNHG12Q9BXW3 62 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 GREB1LQ9C091 1923 aaPredicted RBP11.23□□□□□ -0.61
LRCH3-206ENST00000438796 MST1P26927 711 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 CHCHD1Q96BP2 118 aaKnown RBP11.23□□□□□ -0.61
LRCH3-206ENST00000438796 TRAV12-2A0A075B6T6 113 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 M0R1W7 72 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 VCYO14598 125 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 TMEM158Q8WZ71 300 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 USMG5Q96IX5 58 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 A0A087WWC5 75 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 LINC01619G3V211 115 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 PSG3Q16557 428 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 C2orf82Q6UX34 121 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 GSN-AS1Q9NRJ2 163 aa11.23□□□□□ -0.61
LRCH3-206ENST00000438796 MYLKQ15746 1914 aa11.22□□□□□ -0.61
LRCH3-206ENST00000438796 FLVCR1-AS1Q8TAF5 88 aa11.22□□□□□ -0.61
LRCH3-206ENST00000438796 TRAV9-2A0A087WT02 112 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms