RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 CLEC19AQ6UXS0 136 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 SLC25A48Q6ZT89 311 aaKnown RBP6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 SSC4DQ8WTU2 575 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 EFNB3Q15768 340 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 MIR17HGQ75NE6 70 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 HIST1H2BKO60814 126 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 HIST1H2BJP06899 126 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 HIST1H2BOP23527 126 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 NPPCP23582 126 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 HIST1H2BBP33778 126 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 HIST1H2BDP58876 126 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 HIST1H2BCP62807 126 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 HIST2H2BEQ16778 126 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 C11orf53Q8IXP5 236 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 HIST1H2BHQ93079 126 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 EEF1AKMT3Q96AZ1 226 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 HIST1H2BNQ99877 126 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 HIST1H2BMQ99879 126 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 VSIRQ9H7M9 311 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 FUT9Q9Y231 359 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 UNC80Q8N2C7 3258 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 LRP4O75096 1905 aa6.61□□□□□ -1.35
TMEM39A-202ENST00000438581 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 OR2T8A6NH00 312 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 MFAP2P55001 183 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 KRTDAPP60985 99 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 TEX45Q8NA69 505 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 DUX3Q96PT4 197 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 TBX15Q96SF7 602 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 C1QTNF4Q9BXJ3 329 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 A0A1B0GX51 115 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 H0YJW9 148 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 RPL7P18124 248 aaKnown RBP6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 CCL20P78556 96 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 CD69Q07108 199 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 C3orf36Q3SXR2 165 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 FAM106AQ4KMX7 169 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 TMEM78Q5T7P6 136 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 GOLT1AQ6ZVE7 132 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 C11orf44Q8N8P7 122 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 SNURFLB1AK76 121 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 SHISA9B4DS77 424 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 BUB1B-PAK6H3BSN5 160 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 ATP5G3P48201 142 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 SEC11AP67812 179 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 ICAM4Q14773 271 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 MLANAQ16655 118 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 TEX43Q6ZNM6 134 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 PLXNB1O43157 2135 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 DYSFO75923 2080 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 CD5LO43866 347 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 GCSHP23434 173 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 LOXP28300 417 aaPredicted RBP6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 FAM162BQ5T6X4 162 aa6.6□□□□□ -1.35
TMEM39A-202ENST00000438581 ZNF253O75346 499 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 SRSF3P84103 164 aaKnown RBP6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 CYTL1Q9NRR1 136 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 WDR83OSQ9Y284 106 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 LOC102723971A0A1B0GUV8 181 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 A0A1W2PS18 150 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 B4DSR2 109 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 H3BUX3 64 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 CRXO43186 299 aaPredicted RBP6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 IGKV3-20P01619 116 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 VPREB1P12018 145 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 CFHR2P36980 270 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 ZNF134P52741 427 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 TMEM155Q4W5P6 130 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 IBA57Q5T440 356 aaKnown RBP6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 PRSS3P2Q8NHM4 247 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 Q8TCH9 128 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 TXNDC17Q9BRA2 123 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 SIRPDQ9H106 197 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 FNDC4Q9H6D8 234 aaPredicted RBP6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 SELENOKQ9Y6D0 94 aa6.59□□□□□ -1.35
TMEM39A-202ENST00000438581 CRISP2P16562 243 aa6.59□□□□□ -1.36
TMEM39A-202ENST00000438581 C17orf58Q2M2W7 97 aa6.59□□□□□ -1.36
TMEM39A-202ENST00000438581 TEX29Q8N6K0 151 aa6.59□□□□□ -1.36
TMEM39A-202ENST00000438581 C19orf24Q9BVV8 132 aa6.59□□□□□ -1.36
TMEM39A-202ENST00000438581 MAP1LC3AQ9H492 121 aa6.59□□□□□ -1.36
TMEM39A-202ENST00000438581 JKAMPQ9P055 326 aa6.59□□□□□ -1.36
TMEM39A-202ENST00000438581 RNF223E7ERA6 249 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 PRTN3P24158 256 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 MSMPQ1L6U9 139 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 TREML4Q6UXN2 200 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 LYPD6Q86Y78 171 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 CLDND2Q8NHS1 167 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 RAB37Q96AX2 223 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 ANAPC10Q9UM13 185 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 ABCA12Q86UK0 2595 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 USP34Q70CQ2 3546 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 TRGC2P03986 189 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 SAA4P35542 130 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 ADORA2A-AS1P86434 159 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 TTC9CQ8N5M4 171 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 MRPL32Q9BYC8 188 aaKnown RBP6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 DSCAMO60469 2012 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms