RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 LRRC75A-AS1Q8N1F1 130 aa20.07■□□□□ 0.8
CPNE1-216ENST00000437340 FMC1Q96HJ9 113 aa20.07■□□□□ 0.8
CPNE1-216ENST00000437340 RNASE7Q9H1E1 156 aaKnown RBP20.07■□□□□ 0.8
CPNE1-216ENST00000437340 FASNP49327 2511 aaKnown RBP20.07■□□□□ 0.8
CPNE1-216ENST00000437340 NAV2Q8IVL1 2488 aa20.06■□□□□ 0.8
CPNE1-216ENST00000437340 TRBV19A0A075B6N1 114 aa20.06■□□□□ 0.8
CPNE1-216ENST00000437340 MRPS12O15235 138 aaKnown RBP20.06■□□□□ 0.8
CPNE1-216ENST00000437340 TCRAP04437 139 aa20.06■□□□□ 0.8
CPNE1-216ENST00000437340 RPL15P61313 204 aaKnown RBP20.06■□□□□ 0.8
CPNE1-216ENST00000437340 RHOGP84095 191 aa20.06■□□□□ 0.8
CPNE1-216ENST00000437340 TMEM219Q86XT9 240 aa20.06■□□□□ 0.8
CPNE1-216ENST00000437340 TRAV34A0A0B4J273 112 aa20.06■□□□□ 0.8
CPNE1-216ENST00000437340 S100A7P31151 101 aa20.06■□□□□ 0.8
CPNE1-216ENST00000437340 PITPNC1Q9UKF7 332 aa20.06■□□□□ 0.8
CPNE1-216ENST00000437340 LINC01548A6NM66 108 aa20.05■□□□□ 0.8
CPNE1-216ENST00000437340 IGHV3-23P01764 117 aa20.05■□□□□ 0.8
CPNE1-216ENST00000437340 AMY1AP04745 511 aa20.05■□□□□ 0.8
CPNE1-216ENST00000437340 GPR82Q96P67 336 aa20.05■□□□□ 0.8
CPNE1-216ENST00000437340 MAP1AP78559 2803 aaPredicted RBP20.04■□□□□ 0.8
CPNE1-216ENST00000437340 G3V318 75 aa20.04■□□□□ 0.8
CPNE1-216ENST00000437340 H3BTX0 84 aa20.04■□□□□ 0.8
CPNE1-216ENST00000437340 LINC01356Q8N9X3 169 aa20.04■□□□□ 0.8
CPNE1-216ENST00000437340 MBD6Q96DN6 1003 aa20.04■□□□□ 0.8
CPNE1-216ENST00000437340 A0A096LNT2 108 aa20.03■□□□□ 0.8
CPNE1-216ENST00000437340 ADMP35318 185 aa20.03■□□□□ 0.8
CPNE1-216ENST00000437340 MEOX2P50222 304 aa20.03■□□□□ 0.8
CPNE1-216ENST00000437340 RPL19P84098 196 aaKnown RBP20.03■□□□□ 0.8
CPNE1-216ENST00000437340 PDE6HQ13956 83 aa20.03■□□□□ 0.8
CPNE1-216ENST00000437340 C19orf54Q5BKX5 351 aa20.03■□□□□ 0.8
CPNE1-216ENST00000437340 CMTM2Q8TAZ6 248 aa20.03■□□□□ 0.8
CPNE1-216ENST00000437340 CHRDL1Q9BU40 450 aa20.03■□□□□ 0.8
CPNE1-216ENST00000437340 SH2D7A6NKC9 451 aaPredicted RBP20.03■□□□□ 0.8
CPNE1-216ENST00000437340 NHLRC2Q8NBF2 726 aa20.03■□□□□ 0.8
CPNE1-216ENST00000437340 TRAPPC1Q9Y5R8 145 aa20.03■□□□□ 0.8
CPNE1-216ENST00000437340 M0QZK8 103 aa20.02■□□□□ 0.8
CPNE1-216ENST00000437340 Q5PR19 223 aa20.02■□□□□ 0.8
CPNE1-216ENST00000437340 ATP6V0BQ99437 205 aa20.02■□□□□ 0.8
CPNE1-216ENST00000437340 MLST8Q9BVC4 326 aa20.02■□□□□ 0.8
CPNE1-216ENST00000437340 RPH3ALQ9UNE2 315 aa20.02■□□□□ 0.8
CPNE1-216ENST00000437340 CSMD1Q96PZ7 3565 aa20.02■□□□□ 0.79
CPNE1-216ENST00000437340 TRAV41A0A0B4J266 112 aa20.01■□□□□ 0.79
CPNE1-216ENST00000437340 A6NDX4 124 aa20.01■□□□□ 0.79
CPNE1-216ENST00000437340 LTAP01374 205 aa20.01■□□□□ 0.79
CPNE1-216ENST00000437340 SMIM6P0DI80 62 aa20.01■□□□□ 0.79
CPNE1-216ENST00000437340 EEF1AKMT3Q96AZ1 226 aa20.01■□□□□ 0.79
CPNE1-216ENST00000437340 C12orf57Q99622 126 aa20.01■□□□□ 0.79
CPNE1-216ENST00000437340 RABAC1Q9UI14 185 aa20.01■□□□□ 0.79
CPNE1-216ENST00000437340 TRBV7-1A0A0A6YYK4 115 aa20■□□□□ 0.79
CPNE1-216ENST00000437340 TRBV6-1A0A0K0K1D8 114 aa20■□□□□ 0.79
CPNE1-216ENST00000437340 ZNF705GA8MUZ8 300 aaPredicted RBP20■□□□□ 0.79
CPNE1-216ENST00000437340 BMPR1BO00238 502 aa20■□□□□ 0.79
CPNE1-216ENST00000437340 COA6Q5JTJ3 125 aaKnown RBP20■□□□□ 0.79
CPNE1-216ENST00000437340 SIGLEC15Q6ZMC9 328 aa20■□□□□ 0.79
CPNE1-216ENST00000437340 ZNF414Q96IQ9 312 aa20■□□□□ 0.79
CPNE1-216ENST00000437340 CR1P17927 2039 aa20■□□□□ 0.79
CPNE1-216ENST00000437340 SMIM27A0A1W2PRY6 76 aa20■□□□□ 0.79
CPNE1-216ENST00000437340 IGF1P05019 195 aa20■□□□□ 0.79
CPNE1-216ENST00000437340 RPL7P18124 248 aaKnown RBP20■□□□□ 0.79
CPNE1-216ENST00000437340 GPR183P32249 361 aa20■□□□□ 0.79
CPNE1-216ENST00000437340 KRTAP1-3Q8IUG1 177 aa20■□□□□ 0.79
CPNE1-216ENST00000437340 BCL6BQ8N143 479 aaPredicted RBP20■□□□□ 0.79
CPNE1-216ENST00000437340 HIST3H2BBQ8N257 126 aa20■□□□□ 0.79
CPNE1-216ENST00000437340 EXOC3-AS1Q8N2X6 119 aa20■□□□□ 0.79
CPNE1-216ENST00000437340 H3BUX3 64 aa19.99■□□□□ 0.79
CPNE1-216ENST00000437340 J3QLI3 93 aa19.99■□□□□ 0.79
CPNE1-216ENST00000437340 CLEC3BP05452 202 aa19.99■□□□□ 0.79
CPNE1-216ENST00000437340 OR8I2Q8N0Y5 310 aa19.99■□□□□ 0.79
CPNE1-216ENST00000437340 UNC79Q9P2D8 2635 aa19.98■□□□□ 0.79
CPNE1-216ENST00000437340 GATCO43716 136 aaKnown RBP19.98■□□□□ 0.79
CPNE1-216ENST00000437340 AVPP01185 164 aa19.98■□□□□ 0.79
CPNE1-216ENST00000437340 COX19Q49B96 90 aa19.98■□□□□ 0.79
CPNE1-216ENST00000437340 SERTAD4Q9NUC0 356 aa19.98■□□□□ 0.79
CPNE1-216ENST00000437340 SVEP1Q4LDE5 3571 aa19.98■□□□□ 0.79
CPNE1-216ENST00000437340 IFITM10A6NMD0 228 aa19.98■□□□□ 0.79
CPNE1-216ENST00000437340 LOXL1Q08397 574 aaPredicted RBP19.98■□□□□ 0.79
CPNE1-216ENST00000437340 NUDT10Q8NFP7 164 aa19.98■□□□□ 0.79
CPNE1-216ENST00000437340 NUDT11Q96G61 164 aa19.98■□□□□ 0.79
CPNE1-216ENST00000437340 GRAMD2BQ96HH9 432 aa19.98■□□□□ 0.79
CPNE1-216ENST00000437340 CCDC140Q96MF4 163 aa19.98■□□□□ 0.79
CPNE1-216ENST00000437340 C17orf77Q96MU5 243 aa19.98■□□□□ 0.79
CPNE1-216ENST00000437340 FAM223BA6NKX1 122 aa19.97■□□□□ 0.79
CPNE1-216ENST00000437340 BRI3O95415 125 aa19.97■□□□□ 0.79
CPNE1-216ENST00000437340 RAB9AP51151 201 aa19.97■□□□□ 0.79
CPNE1-216ENST00000437340 FAM223AQ8IWN6 122 aa19.97■□□□□ 0.79
CPNE1-216ENST00000437340 TMEM183AQ8IXX5 376 aa19.97■□□□□ 0.79
CPNE1-216ENST00000437340 IGHG2P01859 326 aa19.96■□□□□ 0.79
CPNE1-216ENST00000437340 S100A2P29034 98 aa19.96■□□□□ 0.79
CPNE1-216ENST00000437340 ATP5G2Q06055 141 aa19.96■□□□□ 0.79
CPNE1-216ENST00000437340 ZNF492Q9P255 531 aa19.96■□□□□ 0.79
CPNE1-216ENST00000437340 SOX21Q9Y651 276 aaPredicted RBP19.96■□□□□ 0.79
CPNE1-216ENST00000437340 PDZD2O15018 2839 aa19.96■□□□□ 0.79
CPNE1-216ENST00000437340 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.96■□□□□ 0.798e-8■■■■□ 20.3
CPNE1-216ENST00000437340 XKRY2A2RUG3 117 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 RNF223E7ERA6 249 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 LY6EQ16553 131 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 GFI1BQ5VTD9 330 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 TOMM20LQ6UXN7 152 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 TMEM75Q8N9X5 138 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 ZFAND3Q9H8U3 227 aa19.95■□□□□ 0.78
CPNE1-216ENST00000437340 K7EQM0 130 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms