RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 PSMB3P49720 205 aa17.54■□□□□ 0.4
CPSF4-204ENST00000436336 C1orf194Q5T5A4 169 aa17.54■□□□□ 0.4
CPSF4-204ENST00000436336 IQCF2Q8IXL9 164 aa17.54■□□□□ 0.4
CPSF4-204ENST00000436336 TMPRSS5Q9H3S3 457 aa17.54■□□□□ 0.4
CPSF4-204ENST00000436336 MED9Q9NWA0 146 aa17.54■□□□□ 0.4
CPSF4-204ENST00000436336 LINC00862A6NCI5 91 aa17.53■□□□□ 0.4
CPSF4-204ENST00000436336 MYCNOSP40205 109 aa17.53■□□□□ 0.4
CPSF4-204ENST00000436336 DLX4Q92988 240 aaPredicted RBP17.53■□□□□ 0.4
CPSF4-204ENST00000436336 TMEM167BQ9NRX6 74 aa17.53■□□□□ 0.4
CPSF4-204ENST00000436336 IGHV3-49A0A0A0MS15 119 aa17.52■□□□□ 0.4
CPSF4-204ENST00000436336 TMEM213A2RRL7 107 aa17.52■□□□□ 0.4
CPSF4-204ENST00000436336 PYYP10082 97 aa17.52■□□□□ 0.4
CPSF4-204ENST00000436336 GP9P14770 177 aa17.52■□□□□ 0.4
CPSF4-204ENST00000436336 RPL7P18124 248 aaKnown RBP17.52■□□□□ 0.4
CPSF4-204ENST00000436336 OR8I2Q8N0Y5 310 aa17.52■□□□□ 0.4
CPSF4-204ENST00000436336 PEMTQ9UBM1 199 aa17.52■□□□□ 0.4
CPSF4-204ENST00000436336 IGHV3OR16-13A0A075B7E8 117 aa17.52■□□□□ 0.39
CPSF4-204ENST00000436336 IGHV3-74A0A0B4J1X5 117 aa17.52■□□□□ 0.39
CPSF4-204ENST00000436336 UBE2L3P68036 154 aaKnown RBP17.52■□□□□ 0.39
CPSF4-204ENST00000436336 PMS2P11Q13670 270 aa17.52■□□□□ 0.39
CPSF4-204ENST00000436336 GRAMD2BQ96HH9 432 aa17.52■□□□□ 0.39
CPSF4-204ENST00000436336 GPR82Q96P67 336 aa17.52■□□□□ 0.39
CPSF4-204ENST00000436336 SMPXQ9UHP9 88 aa17.52■□□□□ 0.39
CPSF4-204ENST00000436336 IGHV3-66A0A0C4DH42 116 aa17.51■□□□□ 0.39
CPSF4-204ENST00000436336 MRPS12O15235 138 aaKnown RBP17.51■□□□□ 0.39
CPSF4-204ENST00000436336 OR10J4P0C629 311 aa17.51■□□□□ 0.39
CPSF4-204ENST00000436336 PPT1P50897 306 aa17.51■□□□□ 0.39
CPSF4-204ENST00000436336 C16orf54Q6UWD8 224 aa17.51■□□□□ 0.39
CPSF4-204ENST00000436336 OR9G4Q8NGQ1 327 aa17.51■□□□□ 0.39
CPSF4-204ENST00000436336 SUN5Q8TC36 379 aa17.51■□□□□ 0.39
CPSF4-204ENST00000436336 FXYD5Q96DB9 178 aa17.51■□□□□ 0.39
CPSF4-204ENST00000436336 TMEM231Q9H6L2 316 aa17.51■□□□□ 0.39
CPSF4-204ENST00000436336 BMI1P35226 326 aa17.5■□□□□ 0.39
CPSF4-204ENST00000436336 MARC2Q969Z3 335 aa17.5■□□□□ 0.39
CPSF4-204ENST00000436336 RHPN1-AS1Q9BWJ2 59 aa17.5■□□□□ 0.39
CPSF4-204ENST00000436336 ATRQ13535 2644 aa17.5■□□□□ 0.39
CPSF4-204ENST00000436336 C2orf70A6NJV1 201 aa17.5■□□□□ 0.39
CPSF4-204ENST00000436336 IFNA1P01562 189 aa17.5■□□□□ 0.39
CPSF4-204ENST00000436336 NDUFA5Q16718 116 aa17.5■□□□□ 0.39
CPSF4-204ENST00000436336 OR4F17Q8NGA8 305 aa17.5■□□□□ 0.39
CPSF4-204ENST00000436336 OR4F4Q96R69 305 aa17.5■□□□□ 0.39
CPSF4-204ENST00000436336 ZNF747Q9BV97 191 aa17.5■□□□□ 0.39
CPSF4-204ENST00000436336 GNG13Q9P2W3 67 aa17.5■□□□□ 0.39
CPSF4-204ENST00000436336 CHEK1O14757 476 aa17.49■□□□□ 0.39
CPSF4-204ENST00000436336 HIST1H1EP10412 219 aaKnown RBP17.49■□□□□ 0.39
CPSF4-204ENST00000436336 EDN2P20800 178 aa17.49■□□□□ 0.39
CPSF4-204ENST00000436336 GLMPQ8WWB7 406 aa17.49■□□□□ 0.39
CPSF4-204ENST00000436336 FAM210AQ96ND0 272 aa17.49■□□□□ 0.39
CPSF4-204ENST00000436336 MANBALQ9NQG1 85 aa17.49■□□□□ 0.39
CPSF4-204ENST00000436336 IGLC2P0DOY2 106 aa17.48■□□□□ 0.39
CPSF4-204ENST00000436336 CBLN1P23435 193 aa17.48■□□□□ 0.39
CPSF4-204ENST00000436336 ELOVL1Q9BW60 279 aa17.48■□□□□ 0.39
CPSF4-204ENST00000436336 NBEAP1P0C6P0 100 aa17.47■□□□□ 0.39
CPSF4-204ENST00000436336 GALR1P47211 349 aa17.47■□□□□ 0.39
CPSF4-204ENST00000436336 COMMD7Q86VX2 200 aa17.47■□□□□ 0.39
CPSF4-204ENST00000436336 RAB19A4D1S5 217 aa17.47■□□□□ 0.39
CPSF4-204ENST00000436336 OVOL1O14753 267 aa17.47■□□□□ 0.39
CPSF4-204ENST00000436336 C12orf54Q6X4T0 127 aa17.47■□□□□ 0.39
CPSF4-204ENST00000436336 SIGLEC15Q6ZMC9 328 aa17.47■□□□□ 0.39
CPSF4-204ENST00000436336 WNK1Q9H4A3 2382 aa17.46■□□□□ 0.39
CPSF4-204ENST00000436336 RBFOX3A6NFN3 312 aa17.46■□□□□ 0.39
CPSF4-204ENST00000436336 H3BQ15 152 aa17.46■□□□□ 0.39
CPSF4-204ENST00000436336 M0QZ24 198 aa17.46■□□□□ 0.39
CPSF4-204ENST00000436336 PF4P02776 101 aa17.46■□□□□ 0.39
CPSF4-204ENST00000436336 FOLR2P14207 255 aa17.46■□□□□ 0.39
CPSF4-204ENST00000436336 TAGLN2P37802 199 aaKnown RBP17.46■□□□□ 0.39
CPSF4-204ENST00000436336 GUK1Q16774 197 aa17.46■□□□□ 0.39
CPSF4-204ENST00000436336 HAGHQ16775 308 aa17.46■□□□□ 0.39
CPSF4-204ENST00000436336 ZNF586Q9NXT0 402 aa17.46■□□□□ 0.39
CPSF4-204ENST00000436336 SMAD5-AS1Q9Y6J3 95 aa17.46■□□□□ 0.39
CPSF4-204ENST00000436336 ARL2-SNX15V9GYD0 113 aa17.46■□□□□ 0.39
CPSF4-204ENST00000436336 BCL2P10415 239 aa17.45■□□□□ 0.38
CPSF4-204ENST00000436336 ATF4P18848 351 aaPredicted RBP17.45■□□□□ 0.38
CPSF4-204ENST00000436336 TOR2AQ5JU69 321 aa17.45■□□□□ 0.38
CPSF4-204ENST00000436336 LURAP1LQ8IV03 231 aa17.45■□□□□ 0.38
CPSF4-204ENST00000436336 C3orf56Q8N813 242 aa17.45■□□□□ 0.38
CPSF4-204ENST00000436336 BLNKQ8WV28 456 aa17.45■□□□□ 0.38
CPSF4-204ENST00000436336 TENM1Q9UKZ4 2725 aa17.45■□□□□ 0.38
CPSF4-204ENST00000436336 FBN1P35555 2871 aaKnown RBP17.44■□□□□ 0.38
CPSF4-204ENST00000436336 HELTA6NFD8 242 aa17.44■□□□□ 0.38
CPSF4-204ENST00000436336 PAGE4O60829 102 aa17.44■□□□□ 0.38
CPSF4-204ENST00000436336 SNRPCP09234 159 aaKnown RBP17.44■□□□□ 0.38
CPSF4-204ENST00000436336 UBE2G2P60604 165 aa17.44■□□□□ 0.38
CPSF4-204ENST00000436336 EIF5A2Q9GZV4 153 aaKnown RBP17.44■□□□□ 0.38
CPSF4-204ENST00000436336 A0A087X0K7 114 aa17.44■□□□□ 0.38
CPSF4-204ENST00000436336 LOC102723971A0A1B0GUV8 181 aa17.44■□□□□ 0.38
CPSF4-204ENST00000436336 CSN3P07498 182 aa17.44■□□□□ 0.38
CPSF4-204ENST00000436336 ZNF506Q5JVG8 444 aa17.44■□□□□ 0.38
CPSF4-204ENST00000436336 ADAMTSL5Q6ZMM2 481 aa17.44■□□□□ 0.38
CPSF4-204ENST00000436336 TRBV19A0A075B6N1 114 aa17.43■□□□□ 0.38
CPSF4-204ENST00000436336 A0A1W2PRE2 83 aa17.43■□□□□ 0.38
CPSF4-204ENST00000436336 FAM74A7A6NL05 159 aa17.43■□□□□ 0.38
CPSF4-204ENST00000436336 ZNF785A8K8V0 405 aa17.43■□□□□ 0.38
CPSF4-204ENST00000436336 PDE6HQ13956 83 aa17.43■□□□□ 0.38
CPSF4-204ENST00000436336 EIF4E3Q8N5X7 224 aaKnown RBP17.43■□□□□ 0.38
CPSF4-204ENST00000436336 RARRES2Q99969 163 aa17.43■□□□□ 0.38
CPSF4-204ENST00000436336 VAX2Q9UIW0 290 aa17.43■□□□□ 0.38
CPSF4-204ENST00000436336 MEOX2P50222 304 aa17.42■□□□□ 0.38
CPSF4-204ENST00000436336 SHISA2Q6UWI4 295 aa17.42■□□□□ 0.38
CPSF4-204ENST00000436336 YTHDF2Q9Y5A9 579 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms