RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 NABP1Q96AH0 204 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 KMT2EQ8IZD2 1858 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 AZU1P20160 251 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 PMVKQ15126 192 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 FNDC4Q9H6D8 234 aaPredicted RBP9.19□□□□□ -0.94
SCN4A-201ENST00000435607 PIN1P1O15428 100 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 SAMD5Q5TGI4 173 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.19□□□□□ -0.94
SCN4A-201ENST00000435607 PSME4Q14997 1843 aa9.19□□□□□ -0.94
SCN4A-201ENST00000435607 F8VVB4 439 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 F8VWA3 439 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 RPL23P62829 140 aaKnown RBP9.18□□□□□ -0.94
SCN4A-201ENST00000435607 SIGMAR1Q99720 223 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 TMEM243Q9BU79 118 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 IGFBP3P17936 291 aaPredicted RBP9.18□□□□□ -0.94
SCN4A-201ENST00000435607 FOXL1Q12952 345 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 SRP19P09132 144 aaKnown RBP9.18□□□□□ -0.94
SCN4A-201ENST00000435607 MEGF9Q9H1U4 602 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 FOXF2Q12947 444 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 ZGRF1Q86YA3 2104 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 FBLN5Q9UBX5 448 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 SCN10AQ9Y5Y9 1956 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 TCTEX1D4Q5JR98 221 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 XCL2Q9UBD3 114 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 SBF1O95248 1867 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 PCNX2A6NKB5 2137 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 MBD3L4A6NDZ8 208 aaPredicted RBP9.18□□□□□ -0.94
SCN4A-201ENST00000435607 MBD3L3A6NE82 208 aaPredicted RBP9.18□□□□□ -0.94
SCN4A-201ENST00000435607 MBD3L5A6NJ08 208 aaPredicted RBP9.18□□□□□ -0.94
SCN4A-201ENST00000435607 H2BFSP57053 126 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 NEGR1Q7Z3B1 354 aa9.18□□□□□ -0.94
SCN4A-201ENST00000435607 MBD3L2Q8NHZ7 208 aaPredicted RBP9.18□□□□□ -0.94
SCN4A-201ENST00000435607 RBM38Q9H0Z9 239 aaKnown RBP9.18□□□□□ -0.94
SCN4A-201ENST00000435607 IGLV3-32A0A0A0MS00 114 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 A6NNC1 897 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 LMO1P25800 156 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 PSG3Q16557 428 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 ZNF362Q5T0B9 420 aaPredicted RBP9.17□□□□□ -0.94
SCN4A-201ENST00000435607 SPATA31B1PQ5VZV4 182 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 UBL5Q9BZL1 73 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 GAGE2AQ6NT46 116 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 SCRT1Q9BWW7 348 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 CR1LQ2VPA4 569 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 PARP14Q460N5 1801 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 NTN3O00634 580 aaPredicted RBP9.17□□□□□ -0.94
SCN4A-201ENST00000435607 C18orf12Q96KH6 178 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 SIGLEC9Q9Y336 463 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 SELENOKQ9Y6D0 94 aa9.17□□□□□ -0.94
SCN4A-201ENST00000435607 TCF20Q9UGU0 1960 aaKnown RBP9.16□□□□□ -0.94
SCN4A-201ENST00000435607 TRAV8-3A0A0A6YYJ7 113 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 hADV29S1A0JD25 119 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 SERF1AO75920 110 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 TCRAP04437 139 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 LAMTOR2Q9Y2Q5 125 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 LOC285556D6RIA3 1793 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 C4orf51C9J302 202 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 OCIAD2Q56VL3 154 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 C14orf178Q8N769 122 aaPredicted RBP9.16□□□□□ -0.94
SCN4A-201ENST00000435607 SPXQ9BT56 116 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 GAGE12JA6NER3 117 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 D6R8Y8 96 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 UBE2E1P51965 193 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 GAGE1Q13065 139 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 GAGE4Q13068 117 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 GAGE5Q13069 117 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 WFDC6Q9BQY6 131 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 ZNF236Q9UL36 1845 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 TRAV8-1A0A0A6YYK1 113 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 CFHR3Q02985 330 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 EXOC3-AS1Q8N2X6 119 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 ADMP35318 185 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 Q0VFX4 171 aa9.16□□□□□ -0.94
SCN4A-201ENST00000435607 Q71RC1 249 aaPredicted RBP9.16□□□□□ -0.94
SCN4A-201ENST00000435607 PHF3Q92576 2039 aaKnown RBP9.16□□□□□ -0.94
SCN4A-201ENST00000435607 WISP3O95389 354 aaPredicted RBP9.15□□□□□ -0.94
SCN4A-201ENST00000435607 PRTN3P24158 256 aa9.15□□□□□ -0.94
SCN4A-201ENST00000435607 SH2D1AO60880 128 aa9.15□□□□□ -0.94
SCN4A-201ENST00000435607 RTBDNQ9BSG5 229 aaPredicted RBP9.15□□□□□ -0.94
SCN4A-201ENST00000435607 KLK5Q9Y337 293 aaPredicted RBP9.15□□□□□ -0.94
SCN4A-201ENST00000435607 OVOL3O00110 214 aa9.15□□□□□ -0.94
SCN4A-201ENST00000435607 IL17DQ8TAD2 202 aa9.15□□□□□ -0.94
SCN4A-201ENST00000435607 IGKV2D-24A0A075B6R9 120 aa9.15□□□□□ -0.95
SCN4A-201ENST00000435607 CCL18P55774 89 aa9.15□□□□□ -0.95
SCN4A-201ENST00000435607 KLF17Q5JT82 389 aaPredicted RBP9.15□□□□□ -0.95
SCN4A-201ENST00000435607 LYZL1Q6UWQ5 148 aa9.15□□□□□ -0.95
SCN4A-201ENST00000435607 RPRMLQ8N4K4 120 aa9.15□□□□□ -0.95
SCN4A-201ENST00000435607 ZNF837Q96EG3 531 aaPredicted RBP9.15□□□□□ -0.95
SCN4A-201ENST00000435607 IGHV1-69DA0A0B4J2H0 117 aa9.15□□□□□ -0.95
SCN4A-201ENST00000435607 IGHV1-69P01742 117 aa9.15□□□□□ -0.95
SCN4A-201ENST00000435607 ANGP03950 147 aaKnown RBP9.15□□□□□ -0.95
SCN4A-201ENST00000435607 TSSC4Q9Y5U2 329 aaPredicted RBP9.14□□□□□ -0.95
SCN4A-201ENST00000435607 TET1Q8NFU7 2136 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 K7ENP7 123 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 PDE6HQ13956 83 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 A0A087WWL8 130 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 CHKB-CPT1BH3BT56 60 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 CRYGSP22914 178 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 MDS2Q8NDY4 140 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 COX11Q9Y6N1 276 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 TMEM170AQ8WVE7 144 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms