RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CFAP47Q6ZTR5 3102 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 SMKR1H3BMG3 65 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 NKX2-8O15522 239 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 CCL3L1P16619 93 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 ZNF788Q6ZQV5 615 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 AMN1Q8IY45 258 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 PIP4P2Q8N4L2 257 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 COL25A1Q9BXS0 654 aaPredicted RBP9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 TPSG1Q9NRR2 321 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 DKK2Q9UBU2 259 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 TMEM213A2RRL7 107 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 C9orf172C9J069 976 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 RPRMLQ8N4K4 120 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 OR10X1Q8NGY0 326 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 DSCAMO60469 2012 aa9.23□□□□□ -0.93
HMGCS1-202ENST00000433297 TNFRSF1AP19438 455 aa9.23□□□□□ -0.93
HMGCS1-202ENST00000433297 ADAMTSL5Q6ZMM2 481 aa9.23□□□□□ -0.93
HMGCS1-202ENST00000433297 SLC25A48Q6ZT89 311 aaKnown RBP9.23□□□□□ -0.93
HMGCS1-202ENST00000433297 OSR1Q8TAX0 266 aaPredicted RBP9.23□□□□□ -0.93
HMGCS1-202ENST00000433297 PRELID3AQ96N28 172 aa9.23□□□□□ -0.93
HMGCS1-202ENST00000433297 PPIAL4EA0A075B759 164 aa9.23□□□□□ -0.93
HMGCS1-202ENST00000433297 PPIAL4FP0DN26 164 aa9.23□□□□□ -0.93
HMGCS1-202ENST00000433297 OR9G4Q8NGQ1 327 aa9.23□□□□□ -0.93
HMGCS1-202ENST00000433297 NHP2Q9NX24 153 aaKnown RBP9.23□□□□□ -0.93
HMGCS1-202ENST00000433297 A0A096LNJ9 63 aa9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 FXYD2P54710 66 aa9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 OR4X2Q8NGF9 303 aa9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 WFDC12Q8WWY7 111 aa9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 C17orf77Q96MU5 243 aa9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 RPUSD1Q9UJJ7 312 aaKnown RBP9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 CGB1A6NKQ9 187 aa9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 ZCCHC24Q8N2G6 241 aaKnown RBP9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 IFI27L1Q96BM0 104 aa9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 SMG1Q96Q15 3661 aaKnown RBP9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 TPRP12270 2363 aaKnown RBP9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 A0A1W2PPI3 338 aa9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 KIR2DL2P43627 348 aaPredicted RBP9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 MBNL2Q5VZF2 373 aaKnown RBP9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 ABHD17AQ96GS6 310 aa9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 MUC3AQ02505 3323 aa9.22□□□□□ -0.93
HMGCS1-202ENST00000433297 RBP4P02753 201 aa9.21□□□□□ -0.93
HMGCS1-202ENST00000433297 GP9P14770 177 aa9.21□□□□□ -0.93
HMGCS1-202ENST00000433297 WFDC2Q14508 124 aa9.21□□□□□ -0.93
HMGCS1-202ENST00000433297 UBALD2Q8IYN6 164 aa9.21□□□□□ -0.93
HMGCS1-202ENST00000433297 C9orf106Q8NAJ2 232 aa9.21□□□□□ -0.93
HMGCS1-202ENST00000433297 RITA1Q96K30 269 aa9.21□□□□□ -0.93
HMGCS1-202ENST00000433297 FCER1GP30273 86 aa9.21□□□□□ -0.94
HMGCS1-202ENST00000433297 PRB3Q04118 309 aaPredicted RBP9.21□□□□□ -0.94
HMGCS1-202ENST00000433297 SH2D6Q7Z4S9 175 aa9.21□□□□□ -0.94
HMGCS1-202ENST00000433297 OR4C13Q8NGP0 309 aa9.21□□□□□ -0.94
HMGCS1-202ENST00000433297 RNF7Q9UBF6 113 aa9.21□□□□□ -0.94
HMGCS1-202ENST00000433297 HIGD1AQ9Y241 93 aa9.21□□□□□ -0.94
HMGCS1-202ENST00000433297 PRSS1P07477 247 aa9.21□□□□□ -0.94
HMGCS1-202ENST00000433297 APOBEC3AP31941 199 aaPredicted RBP9.21□□□□□ -0.94
HMGCS1-202ENST00000433297 LGALS9BQ3B8N2 356 aa9.21□□□□□ -0.94
HMGCS1-202ENST00000433297 TMEM164Q5U3C3 297 aa9.21□□□□□ -0.94
HMGCS1-202ENST00000433297 LGALS9CQ6DKI2 356 aa9.21□□□□□ -0.94
HMGCS1-202ENST00000433297 MDS2Q8NDY4 140 aa9.21□□□□□ -0.94
HMGCS1-202ENST00000433297 GAGE12HA6NDE8 117 aa9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 HBDP02042 147 aa9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 CKS2P33552 79 aa9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 TNFAIP6P98066 277 aaPredicted RBP9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 LYZL1Q6UWQ5 148 aa9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 THAP8Q8NA92 274 aa9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 FAM222BQ8WU58 562 aa9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 ZDBF2Q9HCK1 2354 aa9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 NPIPB6E9PJ23 425 aa9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 ETDBQ3ZM63 59 aa9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 AMTNQ6UX39 209 aa9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 GAFA1Q96PS6 74 aa9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 PLCE1Q9P212 2302 aa9.2□□□□□ -0.94
HMGCS1-202ENST00000433297 A0A1B0GV72 72 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 M0R3E3 92 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 SMIM17P0DL12 118 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 ORMDL3Q8N138 153 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 C8orf46Q8TAG6 207 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 GPR179Q6PRD1 2367 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 IGKV2D-26A0A0A0MRZ7 120 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 M0R296 226 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 CT45A10P0DMU9 189 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 CCL8P80075 99 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 GTSCR1Q86UQ5 136 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 C8orf49Q96NF6 230 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 VGLL1Q99990 258 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 OTORQ9NRC9 128 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 PSG8Q9UQ74 426 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 H3BMG7 143 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 IGLV2-11P01706 119 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 TMEM167AQ8TBQ9 72 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 ARPC1AQ92747 370 aa9.19□□□□□ -0.94
HMGCS1-202ENST00000433297 PRSS47A8MTI9 375 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 LHBP01229 141 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 BMI1P35226 326 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 NCOR1O75376 2440 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 ZNF785A8K8V0 405 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 NDUFS7O75251 213 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 FTH1P19P0C7X4 201 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 TWIST1Q15672 202 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 CD300EQ496F6 205 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms