RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 UCP1P25874 307 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 RPL30P62888 115 aaKnown RBP3.47□□□□□ -1.85
UBE4A-202ENST00000431736 DLK1P80370 383 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 NEU1Q99519 415 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 SDF2L1Q9HCN8 221 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 IGHV4-28A0A0C4DH34 117 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 PAX9P55771 341 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 ZNF266Q14584 549 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 POM121L12Q8N7R1 296 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 OR4C5Q8NGB2 326 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 GPHA2Q96T91 129 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 PAXXQ9BUH6 204 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 NDUFA4L2Q9NRX3 87 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 MLXQ9UH92 298 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 LSM4Q9Y4Z0 139 aaKnown RBP3.47□□□□□ -1.85
UBE4A-202ENST00000431736 DMXL2Q8TDJ6 3036 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 PRSS29PA6NIE9 313 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 POU2AF1Q16633 256 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 CRIP3Q6Q6R5 217 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 RITA1Q96K30 269 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 C16orf90A8MZG2 172 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 FAM3BP58499 235 aaPredicted RBP3.47□□□□□ -1.85
UBE4A-202ENST00000431736 TM2D3Q9BRN9 247 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 BIN3Q9NQY0 253 aa3.47□□□□□ -1.85
UBE4A-202ENST00000431736 GAGE12BA1L429 117 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 TMEM213A2RRL7 107 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 C9JCJ5 164 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 GAGE7O76087 117 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 GAGE12FP0CL80 117 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 GAGE12GP0CL81 117 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 GAGE12IP0CL82 117 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 PTHLHP12272 177 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 RNASE4P34096 147 aaKnown RBP3.46□□□□□ -1.86
UBE4A-202ENST00000431736 RPS11P62280 158 aaKnown RBP eCLIP3.46□□□□□ -1.86
UBE4A-202ENST00000431736 KHDC3LQ587J8 217 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 LGALS9CQ6DKI2 356 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 DHRS11Q6UWP2 260 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 SMIM4Q8WVI0 70 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 GPR146Q96CH1 333 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 YTHDF2Q9Y5A9 579 aaKnown RBP3.46□□□□□ -1.86
UBE4A-202ENST00000431736 IGHV4-4A0A075B6R2 117 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 A8MZ25 164 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 SFT2D2O95562 160 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 ORM1P02763 201 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 RPS19P39019 145 aaKnown RBP3.46□□□□□ -1.86
UBE4A-202ENST00000431736 SSTP61278 116 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 IRF3Q14653 427 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 IGF2BP2-AS1Q96M15 143 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 TRGV9Q99603 122 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 DNAJC4Q9NNZ3 241 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 PLA2G2EQ9NZK7 142 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 RCL1Q9Y2P8 373 aaKnown RBP3.46□□□□□ -1.86
UBE4A-202ENST00000431736 NBEAL1Q6ZS30 2694 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 REV3LO60673 3130 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 J3QL48 77 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 METTL15P1P0C7V9 234 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 FAM90A2PQ658T7 463 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 CHRDL1Q9BU40 450 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 CTDSP2O14595 271 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 PITX3O75364 302 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 PSG1P11464 419 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 FAM78BQ5VT40 261 aa3.46□□□□□ -1.86
UBE4A-202ENST00000431736 A0A0A6YYD4 124 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 FLI1Q01543 452 aaPredicted RBP3.45□□□□□ -1.86
UBE4A-202ENST00000431736 PSG3Q16557 428 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 SPINK13Q1W4C9 94 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 ZNF674Q2M3X9 581 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 SELENOHQ8IZQ5 122 aaKnown RBP3.45□□□□□ -1.86
UBE4A-202ENST00000431736 OR2T35Q8NGX2 323 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 DEDDO75618 318 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 MGST1P10620 155 aaKnown RBP3.45□□□□□ -1.86
UBE4A-202ENST00000431736 CDKN1BP46527 198 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 TAS2R60P59551 318 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 C14orf177Q52M58 125 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 WDR73Q6P4I2 378 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 ODF3L1Q8IXM7 274 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 OR4D5Q8NGN0 318 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 ACTR3CQ9C0K3 210 aaPredicted RBP3.45□□□□□ -1.86
UBE4A-202ENST00000431736 ZNF581Q9P0T4 197 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 SRRM4A7MD48 611 aaKnown RBP3.45□□□□□ -1.86
UBE4A-202ENST00000431736 E5RGE8 158 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 FAM229AH3BQW9 127 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 ARPC5O15511 151 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 ANKRD39Q53RE8 183 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 AMMECR1LQ6DCA0 310 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 LINC00477Q96M19 166 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 C11orf68Q9H3H3 251 aaKnown RBP3.45□□□□□ -1.86
UBE4A-202ENST00000431736 XIRP2A4UGR9 3374 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 PRRC2CQ9Y520 2896 aaKnown RBP3.45□□□□□ -1.86
UBE4A-202ENST00000431736 A0A0J9YY99 117 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 IGLC7A0M8Q6 106 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 TPT1P13693 172 aaKnown RBP3.45□□□□□ -1.86
UBE4A-202ENST00000431736 CXCL2P19875 107 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 LINC00205P59089 165 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 RHEBQ15382 184 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 DGAT2L7PQ6IED9 249 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 ZNF485Q8NCK3 441 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 BTF3L4Q96K17 158 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 C2orf50Q96LR7 162 aa3.45□□□□□ -1.86
UBE4A-202ENST00000431736 AGMATQ9BSE5 352 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms