RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 LINC00479Q96M42 142 aa10.09□□□□□ -0.79
DDX56-204ENST00000431640 PACRGQ96M98 296 aaPredicted RBP10.09□□□□□ -0.79
DDX56-204ENST00000431640 HIST1H2BLQ99880 126 aa10.09□□□□□ -0.79
DDX56-204ENST00000431640 C21orf62Q9NYP8 219 aa10.09□□□□□ -0.79
DDX56-204ENST00000431640 KLK9Q9UKQ9 250 aa10.09□□□□□ -0.79
DDX56-204ENST00000431640 SVEP1Q4LDE5 3571 aa10.08□□□□□ -0.8
DDX56-204ENST00000431640 IZUMO1RA6ND01 250 aa10.08□□□□□ -0.8
DDX56-204ENST00000431640 TCRAP04437 139 aa10.08□□□□□ -0.8
DDX56-204ENST00000431640 Q56UQ5 140 aa10.08□□□□□ -0.8
DDX56-204ENST00000431640 KLF17Q5JT82 389 aaPredicted RBP10.08□□□□□ -0.8
DDX56-204ENST00000431640 RASL11AQ6T310 242 aa10.08□□□□□ -0.8
DDX56-204ENST00000431640 TMEM18Q96B42 140 aa10.08□□□□□ -0.8
DDX56-204ENST00000431640 MRPL18Q9H0U6 180 aaKnown RBP10.08□□□□□ -0.8
DDX56-204ENST00000431640 CELSR1Q9NYQ6 3014 aa10.08□□□□□ -0.8
DDX56-204ENST00000431640 TRAV34A0A0B4J273 112 aa10.07□□□□□ -0.8
DDX56-204ENST00000431640 TRBV6-1A0A0K0K1D8 114 aa10.07□□□□□ -0.8
DDX56-204ENST00000431640 CENPVL3A0A0U1RRI6 287 aa10.07□□□□□ -0.8
DDX56-204ENST00000431640 IL4P05112 153 aa10.07□□□□□ -0.8
DDX56-204ENST00000431640 EGR2P11161 476 aaPredicted RBP10.07□□□□□ -0.8
DDX56-204ENST00000431640 FBLN7Q53RD9 439 aa10.07□□□□□ -0.8
DDX56-204ENST00000431640 PYY3Q5JQD4 70 aa10.07□□□□□ -0.8
DDX56-204ENST00000431640 FAM120AOSQ5T036 256 aa10.07□□□□□ -0.8
DDX56-204ENST00000431640 LEMD1Q68G75 181 aa10.07□□□□□ -0.8
DDX56-204ENST00000431640 MAPK1IP1LQ8NDC0 245 aa10.07□□□□□ -0.8
DDX56-204ENST00000431640 NUDT10Q8NFP7 164 aa10.07□□□□□ -0.8
DDX56-204ENST00000431640 FAM110DQ8TAY7 271 aaPredicted RBP10.07□□□□□ -0.8
DDX56-204ENST00000431640 NUDT11Q96G61 164 aa10.07□□□□□ -0.8
DDX56-204ENST00000431640 ZNF586Q9NXT0 402 aa10.07□□□□□ -0.8
DDX56-204ENST00000431640 OTOGQ6ZRI0 2925 aa10.06□□□□□ -0.8
DDX56-204ENST00000431640 K7EQM0 130 aa10.06□□□□□ -0.8
DDX56-204ENST00000431640 ADMP35318 185 aa10.06□□□□□ -0.8
DDX56-204ENST00000431640 IER3P46695 156 aa10.06□□□□□ -0.8
DDX56-204ENST00000431640 GNG5P63218 68 aa10.06□□□□□ -0.8
DDX56-204ENST00000431640 NDPQ00604 133 aa10.06□□□□□ -0.8
DDX56-204ENST00000431640 WFDC11Q8NEX6 87 aa10.06□□□□□ -0.8
DDX56-204ENST00000431640 MLST8Q9BVC4 326 aa10.06□□□□□ -0.8
DDX56-204ENST00000431640 ZNF331Q9NQX6 463 aaPredicted RBP10.06□□□□□ -0.8
DDX56-204ENST00000431640 GSN-AS1Q9NRJ2 163 aa10.06□□□□□ -0.8
DDX56-204ENST00000431640 FBXL7Q9UJT9 491 aa10.06□□□□□ -0.8
DDX56-204ENST00000431640 ZANQ9Y493 2812 aa10.06□□□□□ -0.8
DDX56-204ENST00000431640 ITPR3Q14573 2671 aa10.06□□□□□ -0.8
DDX56-204ENST00000431640 TRBV19A0A075B6N1 114 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 CYSRT1A8MQ03 144 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 SNURFLB1AK76 121 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 NDUFB8O95169 186 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 LTAP01374 205 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 AMBPP02760 352 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 AMY1AP04745 511 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 CBLN1P23435 193 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 PDE6HQ13956 83 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 USF2Q15853 346 aaPredicted RBP10.05□□□□□ -0.8
DDX56-204ENST00000431640 UNQ5815/PRO19632Q6UWF5 114 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 NHLRC2Q8NBF2 726 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 Q96MF0 132 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 ZNF492Q9P255 531 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 NAT8BQ9UHF3 227 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 OR2J3O76001 311 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 HLA-DQA1P01909 254 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 SNRPCP09234 159 aaKnown RBP10.05□□□□□ -0.8
DDX56-204ENST00000431640 IGLC2P0DOY2 106 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 CRISP2P16562 243 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 DSCR9P59020 149 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 CT83Q5H943 113 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 GBGT1Q8N5D6 347 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 ARL6IP6Q8N6S5 226 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 WIPF2Q8TF74 440 aaPredicted RBP10.05□□□□□ -0.8
DDX56-204ENST00000431640 TSKUQ8WUA8 353 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 DAZAP1Q96EP5 407 aaKnown RBP10.05□□□□□ -0.8
DDX56-204ENST00000431640 TMUB1Q9BVT8 246 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 C7orf69Q9H7B7 122 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 RPH3ALQ9UNE2 315 aa10.05□□□□□ -0.8
DDX56-204ENST00000431640 IGHV1-69DA0A0B4J2H0 117 aa10.04□□□□□ -0.8
DDX56-204ENST00000431640 RNF223E7ERA6 249 aa10.04□□□□□ -0.8
DDX56-204ENST00000431640 F8W735 103 aaPredicted RBP10.04□□□□□ -0.8
DDX56-204ENST00000431640 IGHV1-69P01742 117 aa10.04□□□□□ -0.8
DDX56-204ENST00000431640 Q0VG73 95 aa10.04□□□□□ -0.8
DDX56-204ENST00000431640 JOSD1Q15040 202 aaPredicted RBP10.04□□□□□ -0.8
DDX56-204ENST00000431640 CIARTQ8N365 385 aaPredicted RBP10.04□□□□□ -0.8
DDX56-204ENST00000431640 PIP4P2Q8N4L2 257 aa10.04□□□□□ -0.8
DDX56-204ENST00000431640 ZNF414Q96IQ9 312 aa10.04□□□□□ -0.8
DDX56-204ENST00000431640 MEGF9Q9H1U4 602 aa10.04□□□□□ -0.8
DDX56-204ENST00000431640 ZFP30Q9Y2G7 519 aa10.04□□□□□ -0.8
DDX56-204ENST00000431640 CCDC168Q8NDH2 2452 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 SERTM2A0A1B0GWG4 89 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 A8MWL6 223 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 MRPS12O15235 138 aaKnown RBP10.03□□□□□ -0.8
DDX56-204ENST00000431640 CTSGP08311 255 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 SLC25A16P16260 332 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 RPL7P18124 248 aaKnown RBP10.03□□□□□ -0.8
DDX56-204ENST00000431640 RAB9AP51151 201 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 PAFAH1B2P68402 229 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 PSG9Q00887 426 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 PRR27Q6MZM9 219 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 TMEM136Q6ZRR5 245 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 TMEM75Q8N9X5 138 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 OR5R1Q8NH85 324 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 PRSS22Q9GZN4 317 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 AAMDCQ9H7C9 122 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 RABAC1Q9UI14 185 aa10.03□□□□□ -0.8
DDX56-204ENST00000431640 FAM231BA6NCW3 169 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms